RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 STARD9Q9P2P6 4700 aa3.31□□□□□ -1.88
ATPAF1-204ENST00000474020 KRTAP13-3Q3SY46 172 aa3.31□□□□□ -1.88
ATPAF1-204ENST00000474020 Q75L30 129 aa3.31□□□□□ -1.88
ATPAF1-204ENST00000474020 DMAC1Q96GE9 116 aa3.31□□□□□ -1.88
ATPAF1-204ENST00000474020 RETNLBQ9BQ08 111 aa3.31□□□□□ -1.88
ATPAF1-204ENST00000474020 LINC01558Q9Y6Z2 57 aa3.31□□□□□ -1.88
ATPAF1-204ENST00000474020 DNAH10Q8IVF4 4471 aa3.31□□□□□ -1.88
ATPAF1-204ENST00000474020 HERC1Q15751 4861 aa3.3□□□□□ -1.88
ATPAF1-204ENST00000474020 A6NED7 52 aa3.3□□□□□ -1.88
ATPAF1-204ENST00000474020 KRTAP16-1A8MUX0 517 aa3.3□□□□□ -1.88
ATPAF1-204ENST00000474020 C7orf65Q6ZTY9 151 aa3.3□□□□□ -1.88
ATPAF1-204ENST00000474020 A0A1B0GVY2 172 aa3.29□□□□□ -1.88
ATPAF1-204ENST00000474020 SMR3BP02814 79 aaPredicted RBP3.29□□□□□ -1.88
ATPAF1-204ENST00000474020 Q5VV11 94 aa3.29□□□□□ -1.88
ATPAF1-204ENST00000474020 SPTSSBQ8NFR3 76 aa3.29□□□□□ -1.88
ATPAF1-204ENST00000474020 HECTD4Q9Y4D8 3996 aa3.28□□□□□ -1.88
ATPAF1-204ENST00000474020 DNAH6Q9C0G6 4158 aa3.28□□□□□ -1.88
ATPAF1-204ENST00000474020 SRRM2Q9UQ35 2752 aaKnown RBP3.27□□□□□ -1.89
ATPAF1-204ENST00000474020 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
ATPAF1-204ENST00000474020 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
ATPAF1-204ENST00000474020 DNAH17Q9UFH2 4485 aa3.26□□□□□ -1.89
ATPAF1-204ENST00000474020 A0A1B0GU69 56 aa3.25□□□□□ -1.89
ATPAF1-204ENST00000474020 SEC61GP60059 68 aa3.25□□□□□ -1.89
ATPAF1-204ENST00000474020 ATP11AUNQ6ZP68 121 aa3.24□□□□□ -1.89
ATPAF1-204ENST00000474020 CDC42SE1Q9NRR8 79 aa3.24□□□□□ -1.89
ATPAF1-204ENST00000474020 KMT2AQ03164 3969 aa3.24□□□□□ -1.89
ATPAF1-204ENST00000474020 DMBT1Q9UGM3 2413 aaPredicted RBP3.23□□□□□ -1.89
ATPAF1-204ENST00000474020 C20orf166-AS1Q96NR2 134 aa3.23□□□□□ -1.89
ATPAF1-204ENST00000474020 C9orf92A6NGG3 77 aa3.22□□□□□ -1.89
ATPAF1-204ENST00000474020 A8MUU9 505 aa3.22□□□□□ -1.89
ATPAF1-204ENST00000474020 PMAIP1Q13794 54 aa3.21□□□□□ -1.9
ATPAF1-204ENST00000474020 DNAH2Q9P225 4427 aa3.21□□□□□ -1.9
ATPAF1-204ENST00000474020 KRTAP10-4P60372 401 aaPredicted RBP3.2□□□□□ -1.9
ATPAF1-204ENST00000474020 Q5VSD8 79 aa3.2□□□□□ -1.9
ATPAF1-204ENST00000474020 UQCR11O14957 56 aa3.19□□□□□ -1.9
ATPAF1-204ENST00000474020 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
ATPAF1-204ENST00000474020 SPINK7P58062 85 aa3.17□□□□□ -1.9
ATPAF1-204ENST00000474020 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
ATPAF1-204ENST00000474020 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
ATPAF1-204ENST00000474020 FAT2Q9NYQ8 4349 aa3.17□□□□□ -1.9
ATPAF1-204ENST00000474020 MIR22HGQ0VDD5 57 aa3.16□□□□□ -1.9
ATPAF1-204ENST00000474020 LCA10Q71F78 164 aa3.16□□□□□ -1.9
ATPAF1-204ENST00000474020 DNAH8Q96JB1 4490 aa3.16□□□□□ -1.9
ATPAF1-204ENST00000474020 DNAH11Q96DT5 4516 aa3.16□□□□□ -1.9
ATPAF1-204ENST00000474020 PKD1P98161 4303 aa3.14□□□□□ -1.91
ATPAF1-204ENST00000474020 KRTAP10-8P60410 259 aa3.14□□□□□ -1.91
ATPAF1-204ENST00000474020 KTN1-AS1Q86SY8 53 aa3.14□□□□□ -1.91
ATPAF1-204ENST00000474020 DNAH5Q8TE73 4624 aa3.13□□□□□ -1.91
ATPAF1-204ENST00000474020 SPATA8Q6RVD6 105 aa3.13□□□□□ -1.91
ATPAF1-204ENST00000474020 COX6B2Q6YFQ2 88 aa3.13□□□□□ -1.91
ATPAF1-204ENST00000474020 PKHD1P08F94 4074 aa3.13□□□□□ -1.91
ATPAF1-204ENST00000474020 RPL37P61927 97 aaKnown RBP3.12□□□□□ -1.91
ATPAF1-204ENST00000474020 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
ATPAF1-204ENST00000474020 A6NN06 94 aa3.1□□□□□ -1.91
ATPAF1-204ENST00000474020 DYNC1H1Q14204 4646 aaKnown RBP3.09□□□□□ -1.91
ATPAF1-204ENST00000474020 A8MU10 97 aa3.09□□□□□ -1.91
ATPAF1-204ENST00000474020 K7ERS5 55 aa3.09□□□□□ -1.91
ATPAF1-204ENST00000474020 LRP1BQ9NZR2 4599 aa3.09□□□□□ -1.92
ATPAF1-204ENST00000474020 A0A1B0GU33 70 aa3.07□□□□□ -1.92
ATPAF1-204ENST00000474020 FLG2Q5D862 2391 aaPredicted RBP3.05□□□□□ -1.92
ATPAF1-204ENST00000474020 VPS13BQ7Z7G8 4022 aa3.05□□□□□ -1.92
ATPAF1-204ENST00000474020 H1FX-AS1Q4G0G2 97 aa3.05□□□□□ -1.92
ATPAF1-204ENST00000474020 RBM12B-AS1Q9P1G2 102 aa3.05□□□□□ -1.92
ATPAF1-204ENST00000474020 S4R3F8 94 aa3.05□□□□□ -1.92
ATPAF1-204ENST00000474020 RNF213Q63HN8 5207 aa3.04□□□□□ -1.92
ATPAF1-204ENST00000474020 TPRXLQ17RH7 258 aa3.04□□□□□ -1.92
ATPAF1-204ENST00000474020 HSPG2P98160 4391 aa3.03□□□□□ -1.92
ATPAF1-204ENST00000474020 APOBP04114 4563 aaKnown RBP3.02□□□□□ -1.93
ATPAF1-204ENST00000474020 PRAC1Q96KF2 57 aa3.02□□□□□ -1.93
ATPAF1-204ENST00000474020 MT1HL1P0DM35 61 aa3.01□□□□□ -1.93
ATPAF1-204ENST00000474020 MYCBP2O75592 4640 aa3□□□□□ -1.93
ATPAF1-204ENST00000474020 MUC2Q02817 5179 aa3□□□□□ -1.93
ATPAF1-204ENST00000474020 HMCN2Q8NDA2 5059 aa2.98□□□□□ -1.93
ATPAF1-204ENST00000474020 H0YAA0 97 aa2.98□□□□□ -1.93
ATPAF1-204ENST00000474020 CSAG1Q6PB30 78 aa2.98□□□□□ -1.93
ATPAF1-204ENST00000474020 FAT1Q14517 4588 aa2.98□□□□□ -1.93
ATPAF1-204ENST00000474020 PKHD1L1Q86WI1 4243 aa2.97□□□□□ -1.93
ATPAF1-204ENST00000474020 ADM2Q7Z4H4 148 aa2.92□□□□□ -1.94
ATPAF1-204ENST00000474020 FAT4Q6V0I7 4981 aa2.91□□□□□ -1.94
ATPAF1-204ENST00000474020 M0QZ58 72 aa2.91□□□□□ -1.94
ATPAF1-204ENST00000474020 A0A0D9SG42 100 aa2.9□□□□□ -1.95
ATPAF1-204ENST00000474020 ROMO1P60602 79 aa2.89□□□□□ -1.95
ATPAF1-204ENST00000474020 LINC01554Q52M75 96 aa2.89□□□□□ -1.95
ATPAF1-204ENST00000474020 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
ATPAF1-204ENST00000474020 LRP1Q07954 4544 aaKnown RBP2.87□□□□□ -1.95
ATPAF1-204ENST00000474020 P0C880 135 aa2.86□□□□□ -1.95
ATPAF1-204ENST00000474020 FAT3Q8TDW7 4589 aa2.85□□□□□ -1.95
ATPAF1-204ENST00000474020 KRTAP25-1Q3LHN0 102 aa2.85□□□□□ -1.95
ATPAF1-204ENST00000474020 SPINT4Q6UDR6 99 aa2.84□□□□□ -1.95
ATPAF1-204ENST00000474020 R4GN34 69 aa2.84□□□□□ -1.95
ATPAF1-204ENST00000474020 TNXBP22105 4242 aa2.84□□□□□ -1.95
ATPAF1-204ENST00000474020 LRP2P98164 4655 aa2.84□□□□□ -1.96
ATPAF1-204ENST00000474020 KRTAP12-2P59991 146 aa2.83□□□□□ -1.96
ATPAF1-204ENST00000474020 CRCT1Q9UGL9 99 aa2.83□□□□□ -1.96
ATPAF1-204ENST00000474020 KRTAP13-4Q3LI77 160 aa2.82□□□□□ -1.96
ATPAF1-204ENST00000474020 CRIPTQ9P021 101 aa2.82□□□□□ -1.96
ATPAF1-204ENST00000474020 LCE3AQ5TA76 89 aa2.78□□□□□ -1.96
ATPAF1-204ENST00000474020 FSIP2Q5CZC0 6907 aa2.77□□□□□ -1.97
ATPAF1-204ENST00000474020 KRTAP12-1P59990 96 aa2.77□□□□□ -1.97
ATPAF1-204ENST00000474020 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms