RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 DNAH3Q8TD57 4116 aa2.58□□□□□ -2
RBM39-227ENST00000470563 PP632Q6XCG6 107 aa2.58□□□□□ -2
RBM39-227ENST00000470563 SPINK1P00995 79 aa2.56□□□□□ -2
RBM39-227ENST00000470563 CSAG1Q6PB30 78 aa2.56□□□□□ -2
RBM39-227ENST00000470563 C1orf134Q5TEV5 83 aa2.55□□□□□ -2
RBM39-227ENST00000470563 ANK2Q01484 3957 aa2.54□□□□□ -2
RBM39-227ENST00000470563 TENM1Q9UKZ4 2725 aa2.54□□□□□ -2
RBM39-227ENST00000470563 HECTD1Q9ULT8 2610 aa2.53□□□□□ -2
RBM39-227ENST00000470563 Q6ZSA8 131 aa2.53□□□□□ -2
RBM39-227ENST00000470563 PKD1L1Q8TDX9 2849 aa2.53□□□□□ -2
RBM39-227ENST00000470563 HELZ2Q9BYK8 2649 aaKnown RBP2.52□□□□□ -2.01
RBM39-227ENST00000470563 TENM4Q6N022 2769 aa2.51□□□□□ -2.01
RBM39-227ENST00000470563 H0YAA0 97 aa2.51□□□□□ -2.01
RBM39-227ENST00000470563 H1FX-AS1Q4G0G2 97 aa2.51□□□□□ -2.01
RBM39-227ENST00000470563 C20orf166-AS1Q96NR2 134 aa2.51□□□□□ -2.01
RBM39-227ENST00000470563 HUWE1Q7Z6Z7 4374 aaKnown RBP2.5□□□□□ -2.01
RBM39-227ENST00000470563 DYNC2H1Q8NCM8 4307 aaKnown RBP2.5□□□□□ -2.01
RBM39-227ENST00000470563 ROMO1P60602 79 aa2.5□□□□□ -2.01
RBM39-227ENST00000470563 COX6B2Q6YFQ2 88 aa2.5□□□□□ -2.01
RBM39-227ENST00000470563 CMYA5Q8N3K9 4069 aa2.49□□□□□ -2.01
RBM39-227ENST00000470563 TRRAPQ9Y4A5 3859 aa2.49□□□□□ -2.01
RBM39-227ENST00000470563 OTOGQ6ZRI0 2925 aa2.48□□□□□ -2.01
RBM39-227ENST00000470563 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
RBM39-227ENST00000470563 DNHD1Q96M86 4753 aa2.47□□□□□ -2.01
RBM39-227ENST00000470563 NBEAL1Q6ZS30 2694 aa2.45□□□□□ -2.02
RBM39-227ENST00000470563 DNAH9Q9NYC9 4486 aa2.45□□□□□ -2.02
RBM39-227ENST00000470563 FBN3Q75N90 2809 aa2.44□□□□□ -2.02
RBM39-227ENST00000470563 RPL37P61927 97 aaKnown RBP2.44□□□□□ -2.02
RBM39-227ENST00000470563 KRTAP6-3Q3LI67 103 aa2.44□□□□□ -2.02
RBM39-227ENST00000470563 DNAH6Q9C0G6 4158 aa2.44□□□□□ -2.02
RBM39-227ENST00000470563 STAB1Q9NY15 2570 aa2.44□□□□□ -2.02
RBM39-227ENST00000470563 DNAH10Q8IVF4 4471 aa2.43□□□□□ -2.02
RBM39-227ENST00000470563 PRKDCP78527 4128 aaKnown RBP2.43□□□□□ -2.02
RBM39-227ENST00000470563 STAB2Q8WWQ8 2551 aa2.43□□□□□ -2.02
RBM39-227ENST00000470563 VPS13DQ5THJ4 4388 aa2.42□□□□□ -2.02
RBM39-227ENST00000470563 FBN1P35555 2871 aaKnown RBP2.42□□□□□ -2.02
RBM39-227ENST00000470563 SRRM2Q9UQ35 2752 aaKnown RBP2.42□□□□□ -2.02
RBM39-227ENST00000470563 NOTCH1P46531 2555 aa2.42□□□□□ -2.02
RBM39-227ENST00000470563 DNAH17Q9UFH2 4485 aa2.42□□□□□ -2.02
RBM39-227ENST00000470563 DNAH7Q8WXX0 4024 aa2.41□□□□□ -2.02
RBM39-227ENST00000470563 KRTAP10-1P60331 282 aa2.41□□□□□ -2.02
RBM39-227ENST00000470563 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
RBM39-227ENST00000470563 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
RBM39-227ENST00000470563 LYSTQ99698 3801 aa2.41□□□□□ -2.02
RBM39-227ENST00000470563 DNAH8Q96JB1 4490 aa2.39□□□□□ -2.03
RBM39-227ENST00000470563 HECTD4Q9Y4D8 3996 aa2.39□□□□□ -2.03
RBM39-227ENST00000470563 COL6A5A8TX70 2615 aa2.38□□□□□ -2.03
RBM39-227ENST00000470563 MGAM2Q2M2H8 2515 aa2.38□□□□□ -2.03
RBM39-227ENST00000470563 CRIPTQ9P021 101 aa2.37□□□□□ -2.03
RBM39-227ENST00000470563 TGP01266 2768 aa2.36□□□□□ -2.03
RBM39-227ENST00000470563 PRO2289Q9P1D8 64 aa2.35□□□□□ -2.03
RBM39-227ENST00000470563 S4R3F8 94 aa2.35□□□□□ -2.03
RBM39-227ENST00000470563 PLECQ15149 4684 aaKnown RBP2.34□□□□□ -2.03
RBM39-227ENST00000470563 FRAS1Q86XX4 4008 aa2.34□□□□□ -2.03
RBM39-227ENST00000470563 COL7A1Q02388 2944 aa2.34□□□□□ -2.03
RBM39-227ENST00000470563 C9orf92A6NGG3 77 aa2.34□□□□□ -2.03
RBM39-227ENST00000470563 M0QZ58 72 aa2.34□□□□□ -2.03
RBM39-227ENST00000470563 MEGF8Q7Z7M0 2845 aa2.34□□□□□ -2.04
RBM39-227ENST00000470563 CSMD3Q7Z407 3707 aa2.34□□□□□ -2.04
RBM39-227ENST00000470563 DNAH11Q96DT5 4516 aa2.33□□□□□ -2.04
RBM39-227ENST00000470563 STARD9Q9P2P6 4700 aa2.32□□□□□ -2.04
RBM39-227ENST00000470563 DNAH2Q9P225 4427 aa2.31□□□□□ -2.04
RBM39-227ENST00000470563 TPRXLQ17RH7 258 aa2.31□□□□□ -2.04
RBM39-227ENST00000470563 KRTAP21-3Q3LHN1 58 aa2.31□□□□□ -2.04
RBM39-227ENST00000470563 SACSQ9NZJ4 4579 aa2.3□□□□□ -2.04
RBM39-227ENST00000470563 KRTAP10-4P60372 401 aaPredicted RBP2.29□□□□□ -2.04
RBM39-227ENST00000470563 KRTAP13-4Q3LI77 160 aa2.29□□□□□ -2.04
RBM39-227ENST00000470563 DNAH5Q8TE73 4624 aa2.28□□□□□ -2.04
RBM39-227ENST00000470563 A0A0D9SG42 100 aa2.27□□□□□ -2.05
RBM39-227ENST00000470563 KRTAP12-1P59990 96 aa2.27□□□□□ -2.05
RBM39-227ENST00000470563 FLG2Q5D862 2391 aaPredicted RBP2.27□□□□□ -2.05
RBM39-227ENST00000470563 KMT2AQ03164 3969 aa2.26□□□□□ -2.05
RBM39-227ENST00000470563 PKHD1L1Q86WI1 4243 aa2.26□□□□□ -2.05
RBM39-227ENST00000470563 VPS13BQ7Z7G8 4022 aa2.23□□□□□ -2.05
RBM39-227ENST00000470563 C10orf95Q9H7T3 257 aa2.23□□□□□ -2.05
RBM39-227ENST00000470563 PKHD1P08F94 4074 aa2.23□□□□□ -2.05
RBM39-227ENST00000470563 PKD1P98161 4303 aa2.22□□□□□ -2.05
RBM39-227ENST00000470563 SMR3BP02814 79 aaPredicted RBP2.21□□□□□ -2.06
RBM39-227ENST00000470563 DMBT1Q9UGM3 2413 aaPredicted RBP2.2□□□□□ -2.06
RBM39-227ENST00000470563 RYR3Q15413 4870 aa2.19□□□□□ -2.06
RBM39-227ENST00000470563 LRP1BQ9NZR2 4599 aa2.18□□□□□ -2.06
RBM39-227ENST00000470563 BIRC6Q9NR09 4857 aa2.18□□□□□ -2.06
RBM39-227ENST00000470563 KRTAP12-3P60328 96 aa2.18□□□□□ -2.06
RBM39-227ENST00000470563 PLAC4Q8WY50 150 aa2.18□□□□□ -2.06
RBM39-227ENST00000470563 APOBP04114 4563 aaKnown RBP2.18□□□□□ -2.06
RBM39-227ENST00000470563 FAT2Q9NYQ8 4349 aa2.17□□□□□ -2.06
RBM39-227ENST00000470563 TNXBP22105 4242 aa2.16□□□□□ -2.06
RBM39-227ENST00000470563 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
RBM39-227ENST00000470563 PCLOQ9Y6V0 5065 aa2.15□□□□□ -2.07
RBM39-227ENST00000470563 RYR1P21817 5038 aa2.14□□□□□ -2.07
RBM39-227ENST00000470563 KMT2CQ8NEZ4 4911 aaKnown RBP2.14□□□□□ -2.07
RBM39-227ENST00000470563 Q5VSD8 79 aa2.14□□□□□ -2.07
RBM39-227ENST00000470563 EPPK1P58107 5090 aaKnown RBP2.11□□□□□ -2.07
RBM39-227ENST00000470563 MT1HL1P0DM35 61 aa2.1□□□□□ -2.07
RBM39-227ENST00000470563 LRP1Q07954 4544 aaKnown RBP2.1□□□□□ -2.07
RBM39-227ENST00000470563 FAT1Q14517 4588 aa2.09□□□□□ -2.07
RBM39-227ENST00000470563 DYNC1H1Q14204 4646 aaKnown RBP2.08□□□□□ -2.08
RBM39-227ENST00000470563 HSPG2P98160 4391 aa2.08□□□□□ -2.08
RBM39-227ENST00000470563 HYDINQ4G0P3 5121 aa2.08□□□□□ -2.08
RBM39-227ENST00000470563 FAT3Q8TDW7 4589 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms