RNA–Protein interactions for RNA: ENST00000462489.1

CNOT11-203, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-203ENST00000462489 DNAH8Q96JB1 4490 aa0.35□□□□□ -2.35
CNOT11-203ENST00000462489 FLGP20930 4061 aaPredicted RBP0.35□□□□□ -2.35
CNOT11-203ENST00000462489 NBPF19A0A087WUL8 3843 aa0.35□□□□□ -2.35
CNOT11-203ENST00000462489 HRNRQ86YZ3 2850 aaPredicted RBP0.35□□□□□ -2.35
CNOT11-203ENST00000462489 AKAP9Q99996 3911 aa0.34□□□□□ -2.35
CNOT11-203ENST00000462489 HECTD4Q9Y4D8 3996 aa0.34□□□□□ -2.35
CNOT11-203ENST00000462489 WDR87Q6ZQQ6 2873 aa0.34□□□□□ -2.35
CNOT11-203ENST00000462489 DEFB108AA8MXU0 73 aa0.34□□□□□ -2.36
CNOT11-203ENST00000462489 TGP01266 2768 aa0.34□□□□□ -2.36
CNOT11-203ENST00000462489 RPL39P5Q59GN2 51 aa0.34□□□□□ -2.36
CNOT11-203ENST00000462489 MYCBP2O75592 4640 aa0.34□□□□□ -2.36
CNOT11-203ENST00000462489 MAP1AP78559 2803 aaPredicted RBP0.34□□□□□ -2.36
CNOT11-203ENST00000462489 PKHD1L1Q86WI1 4243 aa0.34□□□□□ -2.36
CNOT11-203ENST00000462489 MXRA5Q9NR99 2828 aa0.33□□□□□ -2.36
CNOT11-203ENST00000462489 MGAM2Q2M2H8 2515 aa0.33□□□□□ -2.36
CNOT11-203ENST00000462489 HSPG2P98160 4391 aa0.33□□□□□ -2.36
CNOT11-203ENST00000462489 LRBAP50851 2863 aa0.33□□□□□ -2.36
CNOT11-203ENST00000462489 RANBP2P49792 3224 aaKnown RBP0.33□□□□□ -2.36
CNOT11-203ENST00000462489 LRP1Q07954 4544 aaKnown RBP0.33□□□□□ -2.36
CNOT11-203ENST00000462489 DMXL2Q8TDJ6 3036 aa0.32□□□□□ -2.36
CNOT11-203ENST00000462489 DNAH7Q8WXX0 4024 aa0.32□□□□□ -2.36
CNOT11-203ENST00000462489 NBEAL1Q6ZS30 2694 aa0.32□□□□□ -2.36
CNOT11-203ENST00000462489 LAMA5O15230 3695 aa0.32□□□□□ -2.36
CNOT11-203ENST00000462489 STAB2Q8WWQ8 2551 aa0.32□□□□□ -2.36
CNOT11-203ENST00000462489 LPAP08519 4548 aa0.31□□□□□ -2.36
CNOT11-203ENST00000462489 TEX15Q9BXT5 2789 aa0.31□□□□□ -2.36
CNOT11-203ENST00000462489 ATMQ13315 3056 aa0.31□□□□□ -2.36
CNOT11-203ENST00000462489 DNAH12Q6ZR08 3092 aa0.31□□□□□ -2.36
CNOT11-203ENST00000462489 HTTP42858 3142 aa0.31□□□□□ -2.36
CNOT11-203ENST00000462489 A0A096LNI7 61 aa0.31□□□□□ -2.36
CNOT11-203ENST00000462489 KRTAP21-1Q3LI58 79 aa0.31□□□□□ -2.36
CNOT11-203ENST00000462489 DNAH6Q9C0G6 4158 aa0.31□□□□□ -2.36
CNOT11-203ENST00000462489 PRUNE2Q8WUY3 3088 aa0.31□□□□□ -2.36
CNOT11-203ENST00000462489 APOBP04114 4563 aaKnown RBP0.31□□□□□ -2.36
CNOT11-203ENST00000462489 CFAP46Q8IYW2 2715 aa0.3□□□□□ -2.36
CNOT11-203ENST00000462489 DNAH1Q9P2D7 4330 aa0.3□□□□□ -2.36
CNOT11-203ENST00000462489 SPRR2DP22532 72 aa0.3□□□□□ -2.36
CNOT11-203ENST00000462489 CSMD1Q96PZ7 3565 aa0.3□□□□□ -2.36
CNOT11-203ENST00000462489 ITPR2Q14571 2701 aa0.29□□□□□ -2.36
CNOT11-203ENST00000462489 LAMA1P25391 3075 aa0.29□□□□□ -2.36
CNOT11-203ENST00000462489 SVEP1Q4LDE5 3571 aa0.29□□□□□ -2.36
CNOT11-203ENST00000462489 SYNE1Q8NF91 8797 aaKnown RBP0.29□□□□□ -2.36
CNOT11-203ENST00000462489 SMG1Q96Q15 3661 aaKnown RBP0.29□□□□□ -2.36
CNOT11-203ENST00000462489 APELAP0DMC3 54 aa0.29□□□□□ -2.36
CNOT11-203ENST00000462489 KRTAP8-1Q8IUC2 63 aa0.29□□□□□ -2.36
CNOT11-203ENST00000462489 RHPN1-AS1Q9BWJ2 59 aa0.29□□□□□ -2.36
CNOT11-203ENST00000462489 RELNP78509 3460 aa0.29□□□□□ -2.36
CNOT11-203ENST00000462489 C5orf42Q9H799 3197 aa0.29□□□□□ -2.36
CNOT11-203ENST00000462489 FAT3Q8TDW7 4589 aa0.28□□□□□ -2.36
CNOT11-203ENST00000462489 COL6A3P12111 3177 aa0.28□□□□□ -2.36
CNOT11-203ENST00000462489 H3BUX3 64 aa0.28□□□□□ -2.36
CNOT11-203ENST00000462489 HTN1P15515 57 aa0.28□□□□□ -2.36
CNOT11-203ENST00000462489 SPRR2BP35325 72 aa0.28□□□□□ -2.36
CNOT11-203ENST00000462489 DEFB1P60022 68 aa0.28□□□□□ -2.36
CNOT11-203ENST00000462489 LRP1BQ9NZR2 4599 aa0.27□□□□□ -2.37
CNOT11-203ENST00000462489 DNAH10Q8IVF4 4471 aa0.27□□□□□ -2.37
CNOT11-203ENST00000462489 SMR3BP02814 79 aaPredicted RBP0.27□□□□□ -2.37
CNOT11-203ENST00000462489 MT1AP04731 61 aa0.27□□□□□ -2.37
CNOT11-203ENST00000462489 DEFB136Q30KP8 78 aa0.27□□□□□ -2.37
CNOT11-203ENST00000462489 KRTAP6-2Q3LI66 62 aa0.27□□□□□ -2.37
CNOT11-203ENST00000462489 TRIOO75962 3097 aa0.27□□□□□ -2.37
CNOT11-203ENST00000462489 PKHD1P08F94 4074 aa0.27□□□□□ -2.37
CNOT11-203ENST00000462489 LAMA3Q16787 3333 aa0.27□□□□□ -2.37
CNOT11-203ENST00000462489 FRYLO94915 3013 aa0.27□□□□□ -2.37
CNOT11-203ENST00000462489 MUC5ACP98088 5654 aa0.27□□□□□ -2.37
CNOT11-203ENST00000462489 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
CNOT11-203ENST00000462489 DMDP11532 3685 aa0.26□□□□□ -2.37
CNOT11-203ENST00000462489 GPR98Q8WXG9 6306 aa0.26□□□□□ -2.37
CNOT11-203ENST00000462489 PHGR1C9JFL3 82 aa0.26□□□□□ -2.37
CNOT11-203ENST00000462489 FAT1Q14517 4588 aa0.25□□□□□ -2.37
CNOT11-203ENST00000462489 NIPBLQ6KC79 2804 aaeCLIP0.25□□□□□ -2.37
CNOT11-203ENST00000462489 TLN1Q9Y490 2541 aaKnown RBP0.25□□□□□ -2.37
CNOT11-203ENST00000462489 SPRR2AP35326 72 aa0.25□□□□□ -2.37
CNOT11-203ENST00000462489 CEP295Q9C0D2 2601 aa0.25□□□□□ -2.37
CNOT11-203ENST00000462489 MYO9AB2RTY4 2548 aa0.25□□□□□ -2.37
CNOT11-203ENST00000462489 MDN1Q9NU22 5596 aa0.25□□□□□ -2.37
CNOT11-203ENST00000462489 DNAH17Q9UFH2 4485 aa0.25□□□□□ -2.37
CNOT11-203ENST00000462489 CENPEQ02224 2701 aa0.24□□□□□ -2.37
CNOT11-203ENST00000462489 MKI67P46013 3256 aaKnown RBP0.24□□□□□ -2.37
CNOT11-203ENST00000462489 CMYA5Q8N3K9 4069 aa0.23□□□□□ -2.37
CNOT11-203ENST00000462489 PLECQ15149 4684 aaKnown RBP0.23□□□□□ -2.37
CNOT11-203ENST00000462489 KRTAP19-5Q3LI72 72 aa0.23□□□□□ -2.37
CNOT11-203ENST00000462489 SRCAPQ6ZRS2 3230 aa0.23□□□□□ -2.37
CNOT11-203ENST00000462489 HMCN2Q8NDA2 5059 aa0.23□□□□□ -2.37
CNOT11-203ENST00000462489 TRRAPQ9Y4A5 3859 aa0.22□□□□□ -2.37
CNOT11-203ENST00000462489 SPRR2EP22531 72 aa0.22□□□□□ -2.37
CNOT11-203ENST00000462489 DEFB124Q8NES8 71 aa0.22□□□□□ -2.37
CNOT11-203ENST00000462489 VPS13CQ709C8 3753 aa0.22□□□□□ -2.37
CNOT11-203ENST00000462489 SZT2Q5T011 3432 aa0.21□□□□□ -2.38
CNOT11-203ENST00000462489 DEFB133Q30KQ1 61 aa0.21□□□□□ -2.38
CNOT11-203ENST00000462489 SPRR2FQ96RM1 72 aa0.21□□□□□ -2.38
CNOT11-203ENST00000462489 LRP2P98164 4655 aa0.21□□□□□ -2.38
CNOT11-203ENST00000462489 DYNC1H1Q14204 4646 aaKnown RBP0.2□□□□□ -2.38
CNOT11-203ENST00000462489 STATHP02808 62 aa0.2□□□□□ -2.38
CNOT11-203ENST00000462489 MUC17Q685J3 4493 aa0.2□□□□□ -2.38
CNOT11-203ENST00000462489 CSMD2Q7Z408 3487 aa0.19□□□□□ -2.38
CNOT11-203ENST00000462489 FREM2Q5SZK8 3169 aa0.19□□□□□ -2.38
CNOT11-203ENST00000462489 BOD1L1Q8NFC6 3051 aa0.19□□□□□ -2.38
CNOT11-203ENST00000462489 A0A096LPF7 62 aa0.19□□□□□ -2.38
CNOT11-203ENST00000462489 MUC3AQ02505 3323 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms