RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 UQCR11O14957 56 aa6.76□□□□□ -1.33
ECHDC1-209ENST00000454591 PKHD1P08F94 4074 aa6.75□□□□□ -1.33
ECHDC1-209ENST00000454591 APOBP04114 4563 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-209ENST00000454591 MIR22HGQ0VDD5 57 aa6.71□□□□□ -1.33
ECHDC1-209ENST00000454591 Q8N1X5 172 aa6.71□□□□□ -1.33
ECHDC1-209ENST00000454591 C9orf92A6NGG3 77 aa6.71□□□□□ -1.34
ECHDC1-209ENST00000454591 SEC61GP60059 68 aa6.69□□□□□ -1.34
ECHDC1-209ENST00000454591 KRTAP3-1Q9BYR8 98 aa6.69□□□□□ -1.34
ECHDC1-209ENST00000454591 KRTAP10-8P60410 259 aa6.67□□□□□ -1.34
ECHDC1-209ENST00000454591 KRTAP17-1Q9BYP8 105 aa6.67□□□□□ -1.34
ECHDC1-209ENST00000454591 RYR2Q92736 4967 aa6.66□□□□□ -1.34
ECHDC1-209ENST00000454591 FLG2Q5D862 2391 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-209ENST00000454591 COX6B2Q6YFQ2 88 aa6.63□□□□□ -1.35
ECHDC1-209ENST00000454591 EPPK1P58107 5090 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-209ENST00000454591 BIRC6Q9NR09 4857 aa6.61□□□□□ -1.35
ECHDC1-209ENST00000454591 RBM12B-AS1Q9P1G2 102 aa6.6□□□□□ -1.35
ECHDC1-209ENST00000454591 FAT1Q14517 4588 aa6.58□□□□□ -1.36
ECHDC1-209ENST00000454591 RPL37P61927 97 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-209ENST00000454591 Q5VSD8 79 aa6.54□□□□□ -1.36
ECHDC1-209ENST00000454591 TNXBP22105 4242 aa6.52□□□□□ -1.37
ECHDC1-209ENST00000454591 A0A1B0GU33 70 aa6.51□□□□□ -1.37
ECHDC1-209ENST00000454591 H0YAA0 97 aa6.51□□□□□ -1.37
ECHDC1-209ENST00000454591 H1FX-AS1Q4G0G2 97 aa6.51□□□□□ -1.37
ECHDC1-209ENST00000454591 FAT3Q8TDW7 4589 aa6.47□□□□□ -1.37
ECHDC1-209ENST00000454591 KRTAP4-11Q9BYQ6 195 aa6.46□□□□□ -1.37
ECHDC1-209ENST00000454591 MT1HL1P0DM35 61 aa6.44□□□□□ -1.38
ECHDC1-209ENST00000454591 KRTAP4-5Q9BYR2 181 aa6.44□□□□□ -1.38
ECHDC1-209ENST00000454591 KRTAP5-3Q6L8H2 238 aa6.42□□□□□ -1.38
ECHDC1-209ENST00000454591 PRAC1Q96KF2 57 aa6.42□□□□□ -1.38
ECHDC1-209ENST00000454591 ADM2Q7Z4H4 148 aa6.41□□□□□ -1.38
ECHDC1-209ENST00000454591 HSPG2P98160 4391 aa6.41□□□□□ -1.38
ECHDC1-209ENST00000454591 KRTAP10-6P60371 365 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-209ENST00000454591 RYR1P21817 5038 aa6.36□□□□□ -1.39
ECHDC1-209ENST00000454591 HERC2O95714 4834 aa6.36□□□□□ -1.39
ECHDC1-209ENST00000454591 S4R3F8 94 aa6.35□□□□□ -1.39
ECHDC1-209ENST00000454591 PCLOQ9Y6V0 5065 aa6.35□□□□□ -1.39
ECHDC1-209ENST00000454591 LRP1Q07954 4544 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-209ENST00000454591 TPRXLQ17RH7 258 aa6.34□□□□□ -1.39
ECHDC1-209ENST00000454591 K7ERS5 55 aa6.3□□□□□ -1.4
ECHDC1-209ENST00000454591 LINC01554Q52M75 96 aa6.3□□□□□ -1.4
ECHDC1-209ENST00000454591 CSAG1Q6PB30 78 aa6.29□□□□□ -1.4
ECHDC1-209ENST00000454591 DMBT1Q9UGM3 2413 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-209ENST00000454591 KRTAP9-8Q9BYQ0 159 aa6.26□□□□□ -1.41
ECHDC1-209ENST00000454591 KIAA1109Q2LD37 5005 aa6.26□□□□□ -1.41
ECHDC1-209ENST00000454591 KRTAP13-4Q3LI77 160 aa6.23□□□□□ -1.41
ECHDC1-209ENST00000454591 KRTAP25-1Q3LHN0 102 aa6.21□□□□□ -1.42
ECHDC1-209ENST00000454591 P0C880 135 aa6.17□□□□□ -1.42
ECHDC1-209ENST00000454591 ROMO1P60602 79 aa6.16□□□□□ -1.42
ECHDC1-209ENST00000454591 MYCBP2O75592 4640 aa6.15□□□□□ -1.43
ECHDC1-209ENST00000454591 ABCA13Q86UQ4 5058 aa6.12□□□□□ -1.43
ECHDC1-209ENST00000454591 M0QZ58 72 aa6.1□□□□□ -1.43
ECHDC1-209ENST00000454591 A0A0D9SG42 100 aa6.07□□□□□ -1.44
ECHDC1-209ENST00000454591 SEC61BP60468 96 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-209ENST00000454591 KRTAP12-1P59990 96 aa6.04□□□□□ -1.44
ECHDC1-209ENST00000454591 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
ECHDC1-209ENST00000454591 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
ECHDC1-209ENST00000454591 LCE5AQ5TCM9 118 aa5.99□□□□□ -1.45
ECHDC1-209ENST00000454591 LRP2P98164 4655 aa5.99□□□□□ -1.45
ECHDC1-209ENST00000454591 HERC1Q15751 4861 aa5.95□□□□□ -1.46
ECHDC1-209ENST00000454591 KRTAP19-2Q3LHN2 52 aa5.92□□□□□ -1.46
ECHDC1-209ENST00000454591 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
ECHDC1-209ENST00000454591 KRTAP4-1Q9BYQ7 146 aa5.91□□□□□ -1.46
ECHDC1-209ENST00000454591 SPINT4Q6UDR6 99 aa5.89□□□□□ -1.47
ECHDC1-209ENST00000454591 LPAP08519 4548 aa5.89□□□□□ -1.47
ECHDC1-209ENST00000454591 MUC17Q685J3 4493 aa5.86□□□□□ -1.47
ECHDC1-209ENST00000454591 R4GN34 69 aa5.85□□□□□ -1.47
ECHDC1-209ENST00000454591 C10orf95Q9H7T3 257 aa5.79□□□□□ -1.48
ECHDC1-209ENST00000454591 KRTAP9-7A8MTY7 169 aa5.78□□□□□ -1.48
ECHDC1-209ENST00000454591 HMCN2Q8NDA2 5059 aa5.67□□□□□ -1.5
ECHDC1-209ENST00000454591 KRTAP9-3Q9BYQ3 159 aa5.67□□□□□ -1.5
ECHDC1-209ENST00000454591 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
ECHDC1-209ENST00000454591 UBR4Q5T4S7 5183 aa5.63□□□□□ -1.51
ECHDC1-209ENST00000454591 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
ECHDC1-209ENST00000454591 FLGP20930 4061 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-209ENST00000454591 H3BS24 57 aa5.58□□□□□ -1.52
ECHDC1-209ENST00000454591 PP632Q6XCG6 107 aa5.57□□□□□ -1.52
ECHDC1-209ENST00000454591 CAMK2N1Q7Z7J9 78 aa5.51□□□□□ -1.53
ECHDC1-209ENST00000454591 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
ECHDC1-209ENST00000454591 SPRR2GQ9BYE4 73 aa5.46□□□□□ -1.54
ECHDC1-209ENST00000454591 RNF213Q63HN8 5207 aa5.45□□□□□ -1.54
ECHDC1-209ENST00000454591 PLAC4Q8WY50 150 aa5.41□□□□□ -1.54
ECHDC1-209ENST00000454591 TNP1P09430 55 aa5.38□□□□□ -1.55
ECHDC1-209ENST00000454591 NDUFAF8A1L188 74 aa5.37□□□□□ -1.55
ECHDC1-209ENST00000454591 MT1HP80294 61 aa5.35□□□□□ -1.55
ECHDC1-209ENST00000454591 MUC2Q02817 5179 aa5.29□□□□□ -1.56
ECHDC1-209ENST00000454591 MT2AP02795 61 aa5.28□□□□□ -1.56
ECHDC1-209ENST00000454591 KRTAP19-8Q3LI54 63 aa5.26□□□□□ -1.57
ECHDC1-209ENST00000454591 MT1FP04733 61 aa5.24□□□□□ -1.57
ECHDC1-209ENST00000454591 M0R2T5 61 aa5.23□□□□□ -1.57
ECHDC1-209ENST00000454591 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
ECHDC1-209ENST00000454591 KRTAP10-10P60014 251 aa5.19□□□□□ -1.58
ECHDC1-209ENST00000454591 LUZP6Q538Z0 58 aa5.13□□□□□ -1.59
ECHDC1-209ENST00000454591 MT1BP07438 61 aa5.12□□□□□ -1.59
ECHDC1-209ENST00000454591 LCE3AQ5TA76 89 aa5.07□□□□□ -1.6
ECHDC1-209ENST00000454591 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
ECHDC1-209ENST00000454591 FAT4Q6V0I7 4981 aa5.06□□□□□ -1.6
ECHDC1-209ENST00000454591 KRTAP10-5P60370 271 aa5.06□□□□□ -1.6
ECHDC1-209ENST00000454591 MT1XP80297 61 aa5.05□□□□□ -1.6
ECHDC1-209ENST00000454591 KRTAP10-12P60413 245 aa4.92□□□□□ -1.62
ECHDC1-209ENST00000454591 PRO2289Q9P1D8 64 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms