RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 MGAM2Q2M2H8 2515 aa3.03□□□□□ -1.92
PCGEM1-201ENST00000454040 TENM2Q9NT68 2774 aa3.02□□□□□ -1.93
PCGEM1-201ENST00000454040 HRES1P13985 223 aa3.02□□□□□ -1.93
PCGEM1-201ENST00000454040 KRTAP10-8P60410 259 aa3.02□□□□□ -1.93
PCGEM1-201ENST00000454040 VPS13DQ5THJ4 4388 aa3.01□□□□□ -1.93
PCGEM1-201ENST00000454040 MRPL34Q9BQ48 92 aaKnown RBP3.01□□□□□ -1.93
PCGEM1-201ENST00000454040 DNAH7Q8WXX0 4024 aa3.01□□□□□ -1.93
PCGEM1-201ENST00000454040 KRTAP13-3Q3SY46 172 aa3□□□□□ -1.93
PCGEM1-201ENST00000454040 DNAH10Q8IVF4 4471 aa3□□□□□ -1.93
PCGEM1-201ENST00000454040 CSMD3Q7Z407 3707 aa3□□□□□ -1.93
PCGEM1-201ENST00000454040 SRRM2Q9UQ35 2752 aaKnown RBP3□□□□□ -1.93
PCGEM1-201ENST00000454040 LYSTQ99698 3801 aa2.99□□□□□ -1.93
PCGEM1-201ENST00000454040 DNAH6Q9C0G6 4158 aa2.98□□□□□ -1.93
PCGEM1-201ENST00000454040 TPRXLQ17RH7 258 aa2.98□□□□□ -1.93
PCGEM1-201ENST00000454040 HECTD4Q9Y4D8 3996 aa2.98□□□□□ -1.93
PCGEM1-201ENST00000454040 PRKDCP78527 4128 aaKnown RBP2.98□□□□□ -1.93
PCGEM1-201ENST00000454040 Q6ZSA8 131 aa2.97□□□□□ -1.93
PCGEM1-201ENST00000454040 SPINK7P58062 85 aa2.96□□□□□ -1.94
PCGEM1-201ENST00000454040 SPATA8Q6RVD6 105 aa2.96□□□□□ -1.94
PCGEM1-201ENST00000454040 PLECQ15149 4684 aaKnown RBP2.96□□□□□ -1.94
PCGEM1-201ENST00000454040 LY6G6CO95867 125 aa2.95□□□□□ -1.94
PCGEM1-201ENST00000454040 COA5Q86WW8 74 aa2.95□□□□□ -1.94
PCGEM1-201ENST00000454040 DNAH17Q9UFH2 4485 aa2.95□□□□□ -1.94
PCGEM1-201ENST00000454040 KRTAP21-3Q3LHN1 58 aa2.95□□□□□ -1.94
PCGEM1-201ENST00000454040 FBN3Q75N90 2809 aa2.94□□□□□ -1.94
PCGEM1-201ENST00000454040 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
PCGEM1-201ENST00000454040 ANAPC11Q9NYG5 84 aa2.94□□□□□ -1.94
PCGEM1-201ENST00000454040 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
PCGEM1-201ENST00000454040 STARD9Q9P2P6 4700 aa2.92□□□□□ -1.94
PCGEM1-201ENST00000454040 PCOTHQ58A44 107 aa2.92□□□□□ -1.94
PCGEM1-201ENST00000454040 SPINK1P00995 79 aa2.91□□□□□ -1.94
PCGEM1-201ENST00000454040 ACYP2P14621 99 aa2.91□□□□□ -1.94
PCGEM1-201ENST00000454040 RPS29P62273 56 aaKnown RBP2.91□□□□□ -1.94
PCGEM1-201ENST00000454040 SPINK6Q6UWN8 80 aa2.91□□□□□ -1.94
PCGEM1-201ENST00000454040 DNAH2Q9P225 4427 aa2.91□□□□□ -1.94
PCGEM1-201ENST00000454040 MEGF8Q7Z7M0 2845 aa2.91□□□□□ -1.94
PCGEM1-201ENST00000454040 KRTAP13-2Q52LG2 175 aa2.91□□□□□ -1.94
PCGEM1-201ENST00000454040 TGP01266 2768 aa2.9□□□□□ -1.94
PCGEM1-201ENST00000454040 KRTAP1-4P0C5Y4 121 aa2.9□□□□□ -1.95
PCGEM1-201ENST00000454040 KRTAP10-1P60331 282 aa2.9□□□□□ -1.95
PCGEM1-201ENST00000454040 LINC00304Q8N9R0 145 aa2.9□□□□□ -1.95
PCGEM1-201ENST00000454040 KMT2AQ03164 3969 aa2.89□□□□□ -1.95
PCGEM1-201ENST00000454040 FRAS1Q86XX4 4008 aa2.88□□□□□ -1.95
PCGEM1-201ENST00000454040 DNAH8Q96JB1 4490 aa2.88□□□□□ -1.95
PCGEM1-201ENST00000454040 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
PCGEM1-201ENST00000454040 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
PCGEM1-201ENST00000454040 ALMS1Q8TCU4 4167 aa2.88□□□□□ -1.95
PCGEM1-201ENST00000454040 INE1O15225 51 aa2.87□□□□□ -1.95
PCGEM1-201ENST00000454040 PKD1P98161 4303 aa2.84□□□□□ -1.95
PCGEM1-201ENST00000454040 DNAH11Q96DT5 4516 aa2.82□□□□□ -1.96
PCGEM1-201ENST00000454040 A0A1B0GU69 56 aa2.82□□□□□ -1.96
PCGEM1-201ENST00000454040 DNAH5Q8TE73 4624 aa2.8□□□□□ -1.96
PCGEM1-201ENST00000454040 DNHD1Q96M86 4753 aa2.8□□□□□ -1.96
PCGEM1-201ENST00000454040 VPS13BQ7Z7G8 4022 aa2.78□□□□□ -1.96
PCGEM1-201ENST00000454040 FAT2Q9NYQ8 4349 aa2.77□□□□□ -1.97
PCGEM1-201ENST00000454040 KRTAP10-4P60372 401 aaPredicted RBP2.77□□□□□ -1.97
PCGEM1-201ENST00000454040 LRP1BQ9NZR2 4599 aa2.75□□□□□ -1.97
PCGEM1-201ENST00000454040 SACSQ9NZJ4 4579 aa2.75□□□□□ -1.97
PCGEM1-201ENST00000454040 HYDINQ4G0P3 5121 aa2.73□□□□□ -1.97
PCGEM1-201ENST00000454040 SMR3BP02814 79 aaPredicted RBP2.73□□□□□ -1.97
PCGEM1-201ENST00000454040 PKHD1L1Q86WI1 4243 aa2.72□□□□□ -1.97
PCGEM1-201ENST00000454040 PKHD1P08F94 4074 aa2.7□□□□□ -1.98
PCGEM1-201ENST00000454040 C9orf92A6NGG3 77 aa2.7□□□□□ -1.98
PCGEM1-201ENST00000454040 COX6B2Q6YFQ2 88 aa2.7□□□□□ -1.98
PCGEM1-201ENST00000454040 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
PCGEM1-201ENST00000454040 PLAC4Q8WY50 150 aa2.68□□□□□ -1.98
PCGEM1-201ENST00000454040 FLG2Q5D862 2391 aaPredicted RBP2.67□□□□□ -1.98
PCGEM1-201ENST00000454040 APOBP04114 4563 aaKnown RBP2.66□□□□□ -1.98
PCGEM1-201ENST00000454040 RPL37P61927 97 aaKnown RBP2.66□□□□□ -1.98
PCGEM1-201ENST00000454040 DYNC1H1Q14204 4646 aaKnown RBP2.65□□□□□ -1.99
PCGEM1-201ENST00000454040 H1FX-AS1Q4G0G2 97 aa2.65□□□□□ -1.99
PCGEM1-201ENST00000454040 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
PCGEM1-201ENST00000454040 KRTAP12-2P59991 146 aa2.63□□□□□ -1.99
PCGEM1-201ENST00000454040 Q5VSD8 79 aa2.63□□□□□ -1.99
PCGEM1-201ENST00000454040 H0YAA0 97 aa2.62□□□□□ -1.99
PCGEM1-201ENST00000454040 TNXBP22105 4242 aa2.61□□□□□ -1.99
PCGEM1-201ENST00000454040 RYR2Q92736 4967 aa2.59□□□□□ -2
PCGEM1-201ENST00000454040 S4R3F8 94 aa2.58□□□□□ -2
PCGEM1-201ENST00000454040 MT1HL1P0DM35 61 aa2.57□□□□□ -2
PCGEM1-201ENST00000454040 FAT1Q14517 4588 aa2.57□□□□□ -2
PCGEM1-201ENST00000454040 HSPG2P98160 4391 aa2.55□□□□□ -2
PCGEM1-201ENST00000454040 FAT3Q8TDW7 4589 aa2.55□□□□□ -2
PCGEM1-201ENST00000454040 DMBT1Q9UGM3 2413 aaPredicted RBP2.53□□□□□ -2
PCGEM1-201ENST00000454040 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
PCGEM1-201ENST00000454040 M0QZ58 72 aa2.51□□□□□ -2.01
PCGEM1-201ENST00000454040 CRIPTQ9P021 101 aa2.51□□□□□ -2.01
PCGEM1-201ENST00000454040 LRP1Q07954 4544 aaKnown RBP2.5□□□□□ -2.01
PCGEM1-201ENST00000454040 RYR1P21817 5038 aa2.49□□□□□ -2.01
PCGEM1-201ENST00000454040 KMT2CQ8NEZ4 4911 aaKnown RBP2.48□□□□□ -2.01
PCGEM1-201ENST00000454040 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
PCGEM1-201ENST00000454040 KRTAP13-4Q3LI77 160 aa2.48□□□□□ -2.01
PCGEM1-201ENST00000454040 RYR3Q15413 4870 aa2.45□□□□□ -2.02
PCGEM1-201ENST00000454040 A0A0D9SG42 100 aa2.44□□□□□ -2.02
PCGEM1-201ENST00000454040 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
PCGEM1-201ENST00000454040 MYCBP2O75592 4640 aa2.43□□□□□ -2.02
PCGEM1-201ENST00000454040 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
PCGEM1-201ENST00000454040 BIRC6Q9NR09 4857 aa2.39□□□□□ -2.03
PCGEM1-201ENST00000454040 KIAA1109Q2LD37 5005 aa2.38□□□□□ -2.03
PCGEM1-201ENST00000454040 EPPK1P58107 5090 aaKnown RBP2.36□□□□□ -2.03
PCGEM1-201ENST00000454040 LRP2P98164 4655 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms