RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 SONP18583 2426 aaKnown RBP1.69□□□□□ -2.14
HMGB3P8-201ENST00000449709 KRTAP13-2Q52LG2 175 aa1.69□□□□□ -2.14
HMGB3P8-201ENST00000449709 LCE3EQ5T5B0 92 aa1.69□□□□□ -2.14
HMGB3P8-201ENST00000449709 COL6A5A8TX70 2615 aa1.69□□□□□ -2.14
HMGB3P8-201ENST00000449709 A0A0D9SG42 100 aa1.68□□□□□ -2.14
HMGB3P8-201ENST00000449709 M0QZ58 72 aa1.68□□□□□ -2.14
HMGB3P8-201ENST00000449709 APLNQ9ULZ1 77 aa1.68□□□□□ -2.14
HMGB3P8-201ENST00000449709 CMYA5Q8N3K9 4069 aa1.67□□□□□ -2.14
HMGB3P8-201ENST00000449709 FBN2P35556 2912 aa1.67□□□□□ -2.14
HMGB3P8-201ENST00000449709 CHD8Q9HCK8 2581 aa1.67□□□□□ -2.14
HMGB3P8-201ENST00000449709 CENPEQ02224 2701 aa1.67□□□□□ -2.14
HMGB3P8-201ENST00000449709 UBE2DNLQ8IWF7 75 aa1.67□□□□□ -2.14
HMGB3P8-201ENST00000449709 ZANQ9Y493 2812 aa1.67□□□□□ -2.14
HMGB3P8-201ENST00000449709 BAHCC1Q9P281 2608 aa1.67□□□□□ -2.14
HMGB3P8-201ENST00000449709 PKD1L2Q7Z442 2459 aa1.66□□□□□ -2.14
HMGB3P8-201ENST00000449709 TTC28Q96AY4 2481 aa1.66□□□□□ -2.14
HMGB3P8-201ENST00000449709 PDZD2O15018 2839 aa1.66□□□□□ -2.14
HMGB3P8-201ENST00000449709 HELZ2Q9BYK8 2649 aaKnown RBP1.66□□□□□ -2.14
HMGB3P8-201ENST00000449709 FBN3Q75N90 2809 aa1.65□□□□□ -2.14
HMGB3P8-201ENST00000449709 APOBP04114 4563 aaKnown RBP1.65□□□□□ -2.15
HMGB3P8-201ENST00000449709 EPG5Q9HCE0 2579 aa1.65□□□□□ -2.15
HMGB3P8-201ENST00000449709 PKD1L1Q8TDX9 2849 aa1.64□□□□□ -2.15
HMGB3P8-201ENST00000449709 FAM208BQ5VWN6 2430 aa1.64□□□□□ -2.15
HMGB3P8-201ENST00000449709 TGP01266 2768 aa1.64□□□□□ -2.15
HMGB3P8-201ENST00000449709 LCE3AQ5TA76 89 aa1.64□□□□□ -2.15
HMGB3P8-201ENST00000449709 SMR3AQ99954 134 aa1.64□□□□□ -2.15
HMGB3P8-201ENST00000449709 NBEAL1Q6ZS30 2694 aa1.64□□□□□ -2.15
HMGB3P8-201ENST00000449709 LRRK2Q5S007 2527 aa1.64□□□□□ -2.15
HMGB3P8-201ENST00000449709 NOTCH2Q04721 2471 aa1.63□□□□□ -2.15
HMGB3P8-201ENST00000449709 Q5VSD8 79 aa1.63□□□□□ -2.15
HMGB3P8-201ENST00000449709 ITPR3Q14573 2671 aa1.63□□□□□ -2.15
HMGB3P8-201ENST00000449709 SETD2Q9BYW2 2564 aaPredicted RBP1.62□□□□□ -2.15
HMGB3P8-201ENST00000449709 TENM3Q9P273 2699 aa1.62□□□□□ -2.15
HMGB3P8-201ENST00000449709 ZNF292O60281 2723 aa1.62□□□□□ -2.15
HMGB3P8-201ENST00000449709 COL7A1Q02388 2944 aa1.62□□□□□ -2.15
HMGB3P8-201ENST00000449709 KMT2AQ03164 3969 aa1.62□□□□□ -2.15
HMGB3P8-201ENST00000449709 LRP1Q07954 4544 aaKnown RBP1.61□□□□□ -2.15
HMGB3P8-201ENST00000449709 PKHD1L1Q86WI1 4243 aa1.61□□□□□ -2.15
HMGB3P8-201ENST00000449709 USP9YO00507 2555 aaPredicted RBP1.61□□□□□ -2.15
HMGB3P8-201ENST00000449709 HECTD4Q9Y4D8 3996 aa1.61□□□□□ -2.15
HMGB3P8-201ENST00000449709 BDP1A6H8Y1 2624 aa1.61□□□□□ -2.15
HMGB3P8-201ENST00000449709 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
HMGB3P8-201ENST00000449709 ZNF469Q96JG9 3925 aaPredicted RBP1.6□□□□□ -2.15
HMGB3P8-201ENST00000449709 PLECQ15149 4684 aaKnown RBP1.6□□□□□ -2.15
HMGB3P8-201ENST00000449709 STARD9Q9P2P6 4700 aa1.6□□□□□ -2.15
HMGB3P8-201ENST00000449709 ITPR2Q14571 2701 aa1.6□□□□□ -2.15
HMGB3P8-201ENST00000449709 DNAH5Q8TE73 4624 aa1.59□□□□□ -2.15
HMGB3P8-201ENST00000449709 ACANP16112 2415 aa1.59□□□□□ -2.15
HMGB3P8-201ENST00000449709 ABCA12Q86UK0 2595 aa1.58□□□□□ -2.16
HMGB3P8-201ENST00000449709 LRP1BQ9NZR2 4599 aa1.57□□□□□ -2.16
HMGB3P8-201ENST00000449709 PKD1P98161 4303 aa1.57□□□□□ -2.16
HMGB3P8-201ENST00000449709 STAB2Q8WWQ8 2551 aa1.56□□□□□ -2.16
HMGB3P8-201ENST00000449709 DYNC1H1Q14204 4646 aaKnown RBP1.56□□□□□ -2.16
HMGB3P8-201ENST00000449709 FASNP49327 2511 aaKnown RBP1.56□□□□□ -2.16
HMGB3P8-201ENST00000449709 FAT2Q9NYQ8 4349 aa1.56□□□□□ -2.16
HMGB3P8-201ENST00000449709 ACACBO00763 2458 aa1.56□□□□□ -2.16
HMGB3P8-201ENST00000449709 DMBT1Q9UGM3 2413 aaPredicted RBP1.55□□□□□ -2.16
HMGB3P8-201ENST00000449709 TNXBP22105 4242 aa1.55□□□□□ -2.16
HMGB3P8-201ENST00000449709 CACNA1AO00555 2505 aa1.54□□□□□ -2.16
HMGB3P8-201ENST00000449709 TEP1Q99973 2627 aaKnown RBP1.54□□□□□ -2.16
HMGB3P8-201ENST00000449709 FAT3Q8TDW7 4589 aa1.53□□□□□ -2.16
HMGB3P8-201ENST00000449709 NOTCH1P46531 2555 aa1.53□□□□□ -2.16
HMGB3P8-201ENST00000449709 HSPG2P98160 4391 aa1.53□□□□□ -2.16
HMGB3P8-201ENST00000449709 ATRQ13535 2644 aa1.53□□□□□ -2.17
HMGB3P8-201ENST00000449709 PKHD1P08F94 4074 aa1.52□□□□□ -2.17
HMGB3P8-201ENST00000449709 FLNAP21333 2647 aaKnown RBP1.51□□□□□ -2.17
HMGB3P8-201ENST00000449709 KRTAP5-5Q701N2 237 aaPredicted RBP1.51□□□□□ -2.17
HMGB3P8-201ENST00000449709 VPS13BQ7Z7G8 4022 aa1.51□□□□□ -2.17
HMGB3P8-201ENST00000449709 KRTAP10-10P60014 251 aa1.5□□□□□ -2.17
HMGB3P8-201ENST00000449709 POLQO75417 2590 aa1.5□□□□□ -2.17
HMGB3P8-201ENST00000449709 MAST4O15021 2626 aa1.49□□□□□ -2.17
HMGB3P8-201ENST00000449709 MYO18BQ8IUG5 2567 aa1.49□□□□□ -2.17
HMGB3P8-201ENST00000449709 FLGP20930 4061 aaPredicted RBP1.49□□□□□ -2.17
HMGB3P8-201ENST00000449709 TENM1Q9UKZ4 2725 aa1.48□□□□□ -2.17
HMGB3P8-201ENST00000449709 C9orf92A6NGG3 77 aa1.48□□□□□ -2.17
HMGB3P8-201ENST00000449709 FLNCQ14315 2725 aa1.48□□□□□ -2.17
HMGB3P8-201ENST00000449709 USP24Q9UPU5 2620 aa1.47□□□□□ -2.17
HMGB3P8-201ENST00000449709 FAT1Q14517 4588 aa1.47□□□□□ -2.17
HMGB3P8-201ENST00000449709 IGSF10Q6WRI0 2623 aa1.46□□□□□ -2.18
HMGB3P8-201ENST00000449709 TNP1P09430 55 aa1.46□□□□□ -2.18
HMGB3P8-201ENST00000449709 LCE3DQ9BYE3 92 aa1.46□□□□□ -2.18
HMGB3P8-201ENST00000449709 FLNBO75369 2602 aaKnown RBP1.45□□□□□ -2.18
HMGB3P8-201ENST00000449709 NSD1Q96L73 2696 aaPredicted RBP1.45□□□□□ -2.18
HMGB3P8-201ENST00000449709 MGAM2Q2M2H8 2515 aa1.44□□□□□ -2.18
HMGB3P8-201ENST00000449709 KRTAP10-1P60331 282 aa1.43□□□□□ -2.18
HMGB3P8-201ENST00000449709 KRTAP10-4P60372 401 aaPredicted RBP1.42□□□□□ -2.18
HMGB3P8-201ENST00000449709 LCE1CQ5T751 118 aa1.42□□□□□ -2.18
HMGB3P8-201ENST00000449709 LCE1BQ5T7P3 118 aa1.42□□□□□ -2.18
HMGB3P8-201ENST00000449709 KRTAP8-1Q8IUC2 63 aa1.42□□□□□ -2.18
HMGB3P8-201ENST00000449709 HERC1Q15751 4861 aa1.42□□□□□ -2.18
HMGB3P8-201ENST00000449709 STAB1Q9NY15 2570 aa1.41□□□□□ -2.18
HMGB3P8-201ENST00000449709 LPAP08519 4548 aa1.39□□□□□ -2.19
HMGB3P8-201ENST00000449709 DNHD1Q96M86 4753 aa1.38□□□□□ -2.19
HMGB3P8-201ENST00000449709 KRTAP2-3P0C7H8 128 aa1.38□□□□□ -2.19
HMGB3P8-201ENST00000449709 KRTAP2-4Q9BYR9 128 aa1.38□□□□□ -2.19
HMGB3P8-201ENST00000449709 KRTAP2-1Q9BYU5 128 aa1.38□□□□□ -2.19
HMGB3P8-201ENST00000449709 MUC17Q685J3 4493 aa1.34□□□□□ -2.19
HMGB3P8-201ENST00000449709 KRTAP6-3Q3LI67 103 aa1.34□□□□□ -2.19
HMGB3P8-201ENST00000449709 KRTAP19-2Q3LHN2 52 aa1.33□□□□□ -2.2
HMGB3P8-201ENST00000449709 LRP2P98164 4655 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms