RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 ANK2Q01484 3957 aa4.68□□□□□ -1.66
CTC1-202ENST00000449476 DNAH5Q8TE73 4624 aa4.67□□□□□ -1.66
CTC1-202ENST00000449476 DNAH8Q96JB1 4490 aa4.66□□□□□ -1.66
CTC1-202ENST00000449476 KRTAP15-1Q3LI76 137 aa4.66□□□□□ -1.66
CTC1-202ENST00000449476 ALMS1Q8TCU4 4167 aa4.65□□□□□ -1.66
CTC1-202ENST00000449476 DNAH11Q96DT5 4516 aa4.63□□□□□ -1.67
CTC1-202ENST00000449476 DNAH17Q9UFH2 4485 aa4.61□□□□□ -1.67
CTC1-202ENST00000449476 VPS13DQ5THJ4 4388 aa4.61□□□□□ -1.67
CTC1-202ENST00000449476 LYSTQ99698 3801 aa4.59□□□□□ -1.67
CTC1-202ENST00000449476 DNHD1Q96M86 4753 aa4.59□□□□□ -1.67
CTC1-202ENST00000449476 STARD9Q9P2P6 4700 aa4.59□□□□□ -1.67
CTC1-202ENST00000449476 DNAH3Q8TD57 4116 aa4.59□□□□□ -1.67
CTC1-202ENST00000449476 LORP23490 312 aaPredicted RBP4.57□□□□□ -1.68
CTC1-202ENST00000449476 FRAS1Q86XX4 4008 aa4.55□□□□□ -1.68
CTC1-202ENST00000449476 DNAH2Q9P225 4427 aa4.53□□□□□ -1.68
CTC1-202ENST00000449476 LRP1BQ9NZR2 4599 aa4.52□□□□□ -1.69
CTC1-202ENST00000449476 KMT2AQ03164 3969 aa4.51□□□□□ -1.69
CTC1-202ENST00000449476 KRTAP10-12P60413 245 aa4.51□□□□□ -1.69
CTC1-202ENST00000449476 CMYA5Q8N3K9 4069 aa4.5□□□□□ -1.69
CTC1-202ENST00000449476 FAT1Q14517 4588 aa4.48□□□□□ -1.69
CTC1-202ENST00000449476 DNAH7Q8WXX0 4024 aa4.47□□□□□ -1.69
CTC1-202ENST00000449476 DYNC1H1Q14204 4646 aaKnown RBP4.46□□□□□ -1.7
CTC1-202ENST00000449476 HECTD4Q9Y4D8 3996 aa4.45□□□□□ -1.7
CTC1-202ENST00000449476 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
CTC1-202ENST00000449476 PRKDCP78527 4128 aaKnown RBP4.43□□□□□ -1.7
CTC1-202ENST00000449476 KRTAP12-3P60328 96 aa4.42□□□□□ -1.7
CTC1-202ENST00000449476 KRTAP4-1Q9BYQ7 146 aa4.41□□□□□ -1.7
CTC1-202ENST00000449476 VPS13BQ7Z7G8 4022 aa4.41□□□□□ -1.7
CTC1-202ENST00000449476 LCE3AQ5TA76 89 aa4.4□□□□□ -1.7
CTC1-202ENST00000449476 DYNC2H1Q8NCM8 4307 aaKnown RBP4.4□□□□□ -1.7
CTC1-202ENST00000449476 DNAH6Q9C0G6 4158 aa4.39□□□□□ -1.71
CTC1-202ENST00000449476 RYR1P21817 5038 aa4.37□□□□□ -1.71
CTC1-202ENST00000449476 SACSQ9NZJ4 4579 aa4.33□□□□□ -1.72
CTC1-202ENST00000449476 INE1O15225 51 aa4.33□□□□□ -1.72
CTC1-202ENST00000449476 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
CTC1-202ENST00000449476 FAT2Q9NYQ8 4349 aa4.27□□□□□ -1.73
CTC1-202ENST00000449476 MYCBP2O75592 4640 aa4.25□□□□□ -1.73
CTC1-202ENST00000449476 KIAA1109Q2LD37 5005 aa4.25□□□□□ -1.73
CTC1-202ENST00000449476 APOBP04114 4563 aaKnown RBP4.23□□□□□ -1.73
CTC1-202ENST00000449476 MT1HP80294 61 aa4.23□□□□□ -1.73
CTC1-202ENST00000449476 MT2AP02795 61 aa4.21□□□□□ -1.74
CTC1-202ENST00000449476 SPRR2GQ9BYE4 73 aa4.2□□□□□ -1.74
CTC1-202ENST00000449476 HYDINQ4G0P3 5121 aa4.15□□□□□ -1.74
CTC1-202ENST00000449476 KRTAP17-1Q9BYP8 105 aa4.14□□□□□ -1.75
CTC1-202ENST00000449476 RYR3Q15413 4870 aa4.14□□□□□ -1.75
CTC1-202ENST00000449476 LRP1Q07954 4544 aaKnown RBP4.14□□□□□ -1.75
CTC1-202ENST00000449476 MT1FP04733 61 aa4.13□□□□□ -1.75
CTC1-202ENST00000449476 PKHD1P08F94 4074 aa4.11□□□□□ -1.75
CTC1-202ENST00000449476 FAT3Q8TDW7 4589 aa4.1□□□□□ -1.75
CTC1-202ENST00000449476 KRTAP8-1Q8IUC2 63 aa4.09□□□□□ -1.75
CTC1-202ENST00000449476 PKD1P98161 4303 aa4.08□□□□□ -1.76
CTC1-202ENST00000449476 RYR2Q92736 4967 aa4.02□□□□□ -1.77
CTC1-202ENST00000449476 KRTAP19-1Q8IUB9 90 aa3.99□□□□□ -1.77
CTC1-202ENST00000449476 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
CTC1-202ENST00000449476 LRP2P98164 4655 aa3.98□□□□□ -1.77
CTC1-202ENST00000449476 KRTAP19-5Q3LI72 72 aa3.96□□□□□ -1.78
CTC1-202ENST00000449476 PKHD1L1Q86WI1 4243 aa3.95□□□□□ -1.78
CTC1-202ENST00000449476 HSPG2P98160 4391 aa3.94□□□□□ -1.78
CTC1-202ENST00000449476 HERC2O95714 4834 aa3.93□□□□□ -1.78
CTC1-202ENST00000449476 KRTAP19-8Q3LI54 63 aa3.93□□□□□ -1.78
CTC1-202ENST00000449476 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
CTC1-202ENST00000449476 KMT2CQ8NEZ4 4911 aaKnown RBP3.89□□□□□ -1.79
CTC1-202ENST00000449476 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
CTC1-202ENST00000449476 TNXBP22105 4242 aa3.85□□□□□ -1.79
CTC1-202ENST00000449476 MT1XP80297 61 aa3.83□□□□□ -1.8
CTC1-202ENST00000449476 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
CTC1-202ENST00000449476 MT1BP07438 61 aa3.82□□□□□ -1.8
CTC1-202ENST00000449476 SPRR5A0A1B0GTR4 108 aa3.82□□□□□ -1.8
CTC1-202ENST00000449476 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
CTC1-202ENST00000449476 LCE2CQ5TA81 110 aa3.81□□□□□ -1.8
CTC1-202ENST00000449476 LPAP08519 4548 aa3.81□□□□□ -1.8
CTC1-202ENST00000449476 BIRC6Q9NR09 4857 aa3.81□□□□□ -1.8
CTC1-202ENST00000449476 KRTAP19-4Q3LI73 84 aa3.78□□□□□ -1.8
CTC1-202ENST00000449476 PCLOQ9Y6V0 5065 aa3.75□□□□□ -1.81
CTC1-202ENST00000449476 HERC1Q15751 4861 aa3.72□□□□□ -1.81
CTC1-202ENST00000449476 KRTAP9-3Q9BYQ3 159 aa3.71□□□□□ -1.82
CTC1-202ENST00000449476 KRTAP19-2Q3LHN2 52 aa3.7□□□□□ -1.82
CTC1-202ENST00000449476 KRTAP4-8A0A0G2JLE6 195 aa3.68□□□□□ -1.82
CTC1-202ENST00000449476 KRTAP4-8Q9BYQ9 185 aa3.68□□□□□ -1.82
CTC1-202ENST00000449476 EPPK1P58107 5090 aaKnown RBP3.65□□□□□ -1.83
CTC1-202ENST00000449476 MUC17Q685J3 4493 aa3.64□□□□□ -1.83
CTC1-202ENST00000449476 ABCA13Q86UQ4 5058 aa3.58□□□□□ -1.84
CTC1-202ENST00000449476 MT1GP13640 62 aa3.58□□□□□ -1.84
CTC1-202ENST00000449476 FLGP20930 4061 aaPredicted RBP3.56□□□□□ -1.84
CTC1-202ENST00000449476 LCE2BO14633 110 aa3.55□□□□□ -1.84
CTC1-202ENST00000449476 LCE3BQ5TA77 95 aa3.54□□□□□ -1.84
CTC1-202ENST00000449476 SPRR2EP22531 72 aa3.51□□□□□ -1.85
CTC1-202ENST00000449476 SPRR2BP35325 72 aa3.51□□□□□ -1.85
CTC1-202ENST00000449476 SPRR2AP35326 72 aa3.51□□□□□ -1.85
CTC1-202ENST00000449476 KRTAP12-4P60329 112 aa3.5□□□□□ -1.85
CTC1-202ENST00000449476 KRTAP4-7Q9BYR0 210 aa3.48□□□□□ -1.85
CTC1-202ENST00000449476 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
CTC1-202ENST00000449476 UBR4Q5T4S7 5183 aa3.46□□□□□ -1.86
CTC1-202ENST00000449476 MT1LQ93083 61 aa3.45□□□□□ -1.86
CTC1-202ENST00000449476 MUC2Q02817 5179 aa3.45□□□□□ -1.86
CTC1-202ENST00000449476 MT1EP04732 61 aa3.43□□□□□ -1.86
CTC1-202ENST00000449476 KRTAP19-3Q7Z4W3 81 aa3.42□□□□□ -1.86
CTC1-202ENST00000449476 FAT4Q6V0I7 4981 aa3.42□□□□□ -1.86
CTC1-202ENST00000449476 RNF213Q63HN8 5207 aa3.39□□□□□ -1.87
CTC1-202ENST00000449476 SPRR2DP22532 72 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms