RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 DCAF8L2P0C7V8 631 aa18.13■□□□□ 0.49
CTC1-202ENST00000449476 NISCHQ9Y2I1 1504 aa18.08■□□□□ 0.49
CTC1-202ENST00000449476 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
CTC1-202ENST00000449476 SHROOM4Q9ULL8 1493 aa17.25■□□□□ 0.35
CTC1-202ENST00000449476 EHMT2Q96KQ7 1210 aa16.72■□□□□ 0.27
CTC1-202ENST00000449476 FAM9AQ8IZU1 332 aaPredicted RBP16.43■□□□□ 0.22
CTC1-202ENST00000449476 PCGF6Q9BYE7 350 aa16.38■□□□□ 0.21
CTC1-202ENST00000449476 APLP2Q06481 763 aa16.27■□□□□ 0.2
CTC1-202ENST00000449476 TRIM41Q8WV44 630 aa16.19■□□□□ 0.18
CTC1-202ENST00000449476 TTBK1Q5TCY1 1321 aaPredicted RBP16.16■□□□□ 0.18
CTC1-202ENST00000449476 PELP1Q8IZL8 1130 aaKnown RBP16■□□□□ 0.15
CTC1-202ENST00000449476 ZEB1P37275 1124 aaPredicted RBP15.98■□□□□ 0.15
CTC1-202ENST00000449476 RANGAP1P46060 587 aaPredicted RBP15.95■□□□□ 0.14
CTC1-202ENST00000449476 CCER1Q8TC90 406 aaPredicted RBP15.93■□□□□ 0.14
CTC1-202ENST00000449476 UBTFP17480 764 aaKnown RBP15.88■□□□□ 0.13
CTC1-202ENST00000449476 CHIC1Q5VXU3 224 aa15.8■□□□□ 0.12
CTC1-202ENST00000449476 CENPBP07199 599 aaPredicted RBP15.78■□□□□ 0.12
CTC1-202ENST00000449476 PPARGC1BQ86YN6 1023 aaKnown RBP15.75■□□□□ 0.11
CTC1-202ENST00000449476 TRIM26Q12899 539 aaPredicted RBP15.74■□□□□ 0.11
CTC1-202ENST00000449476 LOC105371045A0A1W2PR82 267 aa15.72■□□□□ 0.11
CTC1-202ENST00000449476 ATP1B4Q9UN42 357 aaPredicted RBP15.71■□□□□ 0.11
CTC1-202ENST00000449476 HRCP23327 699 aa15.68■□□□□ 0.1
CTC1-202ENST00000449476 YTHDC1Q96MU7 727 aaKnown RBP15.5■□□□□ 0.07
CTC1-202ENST00000449476 HNRNPUL2Q1KMD3 747 aaKnown RBP15.35■□□□□ 0.05
CTC1-202ENST00000449476 ITGAEP38570 1179 aa15.35■□□□□ 0.05
CTC1-202ENST00000449476 NEFLP07196 543 aa15.32■□□□□ 0.04
CTC1-202ENST00000449476 ERICH6Q7L0X2 663 aa15.31■□□□□ 0.04
CTC1-202ENST00000449476 ABCC9O60706 1549 aa15.29■□□□□ 0.04
CTC1-202ENST00000449476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.03
CTC1-202ENST00000449476 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
CTC1-202ENST00000449476 DIEXFQ68CQ4 756 aaKnown RBP15.12■□□□□ 0.01
CTC1-202ENST00000449476 POLR3GLQ9BT43 218 aa15.03■□□□□ -0
CTC1-202ENST00000449476 ZCCHC6Q5VYS8 1495 aaKnown RBP15.01□□□□□ -0.01
CTC1-202ENST00000449476 MYT1Q01538 1121 aa15□□□□□ -0.01
CTC1-202ENST00000449476 FAM50AQ14320 339 aaKnown RBP14.97□□□□□ -0.01
CTC1-202ENST00000449476 CNGB1Q14028 1251 aaPredicted RBP14.93□□□□□ -0.02
CTC1-202ENST00000449476 CSRNP3Q8WYN3 585 aa14.92□□□□□ -0.02
CTC1-202ENST00000449476 MYT1LQ9UL68 1186 aa14.92□□□□□ -0.02
CTC1-202ENST00000449476 CCDC180Q9P1Z9 1646 aa14.87□□□□□ -0.03
CTC1-202ENST00000449476 NEUROD1Q13562 356 aa14.86□□□□□ -0.03
CTC1-202ENST00000449476 SCRIBQ14160 1630 aa14.82□□□□□ -0.04
CTC1-202ENST00000449476 ZNF316A6NFI3 1004 aaPredicted RBP14.81□□□□□ -0.04
CTC1-202ENST00000449476 TRIM52Q96A61 297 aa14.81□□□□□ -0.04
CTC1-202ENST00000449476 GTF3C3Q9Y5Q9 886 aa14.8□□□□□ -0.04
CTC1-202ENST00000449476 DCAF1Q9Y4B6 1507 aa14.78□□□□□ -0.04
CTC1-202ENST00000449476 P3H3Q8IVL6 736 aa14.72□□□□□ -0.05
CTC1-202ENST00000449476 DAXXQ9UER7 740 aaPredicted RBP14.71□□□□□ -0.06
CTC1-202ENST00000449476 ANP32CO43423 234 aa14.68□□□□□ -0.06
CTC1-202ENST00000449476 ACIN1Q9UKV3 1341 aaKnown RBP14.66□□□□□ -0.06
CTC1-202ENST00000449476 BCANQ96GW7 911 aa14.64□□□□□ -0.07
CTC1-202ENST00000449476 ZNF326Q5BKZ1 582 aaKnown RBP14.62□□□□□ -0.07
CTC1-202ENST00000449476 SLC4A1APQ9BWU0 796 aaKnown RBP14.61□□□□□ -0.07
CTC1-202ENST00000449476 FBLN2P98095 1184 aa14.61□□□□□ -0.07
CTC1-202ENST00000449476 MYO15BQ96JP2 1530 aa14.6□□□□□ -0.07
CTC1-202ENST00000449476 ARID3CA6NKF2 412 aa14.57□□□□□ -0.08
CTC1-202ENST00000449476 RSF1Q96T23 1441 aaPredicted RBP14.55□□□□□ -0.08
CTC1-202ENST00000449476 CLSPNQ9HAW4 1339 aa14.5□□□□□ -0.09
CTC1-202ENST00000449476 RTL5Q5HYW3 569 aaPredicted RBP14.46□□□□□ -0.09
CTC1-202ENST00000449476 CDK11AQ9UQ88 783 aaPredicted RBP14.45□□□□□ -0.1
CTC1-202ENST00000449476 ZNF777Q9ULD5 760 aaPredicted RBP14.44□□□□□ -0.1
CTC1-202ENST00000449476 TONSLQ96HA7 1378 aa14.42□□□□□ -0.1
CTC1-202ENST00000449476 CLIP1P30622 1438 aa14.41□□□□□ -0.1
CTC1-202ENST00000449476 DDX10Q13206 875 aaKnown RBP14.39□□□□□ -0.11
CTC1-202ENST00000449476 RB1CC1Q8TDY2 1594 aa14.36□□□□□ -0.11
CTC1-202ENST00000449476 EEA1Q15075 1411 aa14.35□□□□□ -0.11
CTC1-202ENST00000449476 CEP162Q5TB80 1403 aa14.35□□□□□ -0.11
CTC1-202ENST00000449476 FKBP8Q14318 412 aa14.32□□□□□ -0.12
CTC1-202ENST00000449476 CHIC2Q9UKJ5 165 aa14.32□□□□□ -0.12
CTC1-202ENST00000449476 GOLGA3Q08378 1498 aa14.31□□□□□ -0.12
CTC1-202ENST00000449476 MIER1Q8N108 512 aa14.31□□□□□ -0.12
CTC1-202ENST00000449476 NACADO15069 1562 aa14.3□□□□□ -0.12
CTC1-202ENST00000449476 WRNQ14191 1432 aaPredicted RBP eCLIP14.29□□□□□ -0.12
CTC1-202ENST00000449476 SCAF1Q9H7N4 1312 aaKnown RBP14.29□□□□□ -0.12
CTC1-202ENST00000449476 HNRNPUQ00839 825 aaKnown RBP eCLIP14.29□□□□□ -0.12
CTC1-202ENST00000449476 MTUS2Q5JR59 1369 aa14.27□□□□□ -0.13
CTC1-202ENST00000449476 TNIKQ9UKE5 1360 aa14.26□□□□□ -0.13
CTC1-202ENST00000449476 FAM9BQ8IZU0 186 aa14.24□□□□□ -0.13
CTC1-202ENST00000449476 CECR2Q9BXF3 1484 aa14.23□□□□□ -0.13
CTC1-202ENST00000449476 CANXP27824 592 aaKnown RBP14.22□□□□□ -0.13
CTC1-202ENST00000449476 HIRIP3Q9BW71 556 aaPredicted RBP14.21□□□□□ -0.13
CTC1-202ENST00000449476 BAZ1BQ9UIG0 1483 aaKnown RBP14.19□□□□□ -0.14
CTC1-202ENST00000449476 CEP164Q9UPV0 1460 aa14.18□□□□□ -0.14
CTC1-202ENST00000449476 BAZ1AQ9NRL2 1556 aaPredicted RBP14.17□□□□□ -0.14
CTC1-202ENST00000449476 ANP32AP39687 249 aaKnown RBP14.17□□□□□ -0.14
CTC1-202ENST00000449476 ZBTB47Q9UFB7 747 aaPredicted RBP14.15□□□□□ -0.14
CTC1-202ENST00000449476 TSPY4P0CV99 314 aa14.15□□□□□ -0.14
CTC1-202ENST00000449476 TSPY10P0CW01 314 aa14.15□□□□□ -0.14
CTC1-202ENST00000449476 RRP7BPQ9NSQ0 103 aa14.14□□□□□ -0.15
CTC1-202ENST00000449476 KIF27Q86VH2 1401 aa14.14□□□□□ -0.15
CTC1-202ENST00000449476 NEFMP07197 916 aa14.14□□□□□ -0.15
CTC1-202ENST00000449476 TMC1Q8TDI8 760 aa14.13□□□□□ -0.15
CTC1-202ENST00000449476 MRS2Q9HD23 443 aa14.13□□□□□ -0.15
CTC1-202ENST00000449476 SALL2Q9Y467 1007 aaPredicted RBP14.13□□□□□ -0.15
CTC1-202ENST00000449476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.156e-7■■■□□ 19.2
CTC1-202ENST00000449476 CHGAP10645 457 aaKnown RBP14.11□□□□□ -0.15
CTC1-202ENST00000449476 NPM2Q86SE8 214 aaKnown RBP14.11□□□□□ -0.15
CTC1-202ENST00000449476 KDM2AQ9Y2K7 1162 aa14.11□□□□□ -0.15
CTC1-202ENST00000449476 EIF4G2P78344 907 aaKnown RBP eCLIP14.1□□□□□ -0.15
CTC1-202ENST00000449476 CHMP7Q8WUX9 453 aaPredicted RBP14.1□□□□□ -0.15
CTC1-202ENST00000449476 BCL11AQ9H165 835 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms