RNA–Protein interactions for RNA: ENST00000448327.1

LINC01564-201, Transcript of long intergenic non-protein coding RNA 1564, humanhuman

TSL 3 BASIC

Gene LINC01564, Length 566 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01564-201ENST00000448327 CSPG4Q6UVK1 2322 aa0.6□□□□□ -2.31
LINC01564-201ENST00000448327 MAP1BP46821 2468 aaKnown RBP0.6□□□□□ -2.31
LINC01564-201ENST00000448327 CCDC168Q8NDH2 2452 aa0.6□□□□□ -2.31
LINC01564-201ENST00000448327 HSPG2P98160 4391 aa0.6□□□□□ -2.31
LINC01564-201ENST00000448327 ASPMQ8IZT6 3477 aa0.59□□□□□ -2.31
LINC01564-201ENST00000448327 COL7A1Q02388 2944 aa0.59□□□□□ -2.31
LINC01564-201ENST00000448327 SETXQ7Z333 2677 aaKnown RBP0.59□□□□□ -2.31
LINC01564-201ENST00000448327 PIEZO1Q92508 2521 aa0.59□□□□□ -2.31
LINC01564-201ENST00000448327 LINC01556Q5JQF7 62 aa0.59□□□□□ -2.31
LINC01564-201ENST00000448327 COL6A5A8TX70 2615 aa0.59□□□□□ -2.32
LINC01564-201ENST00000448327 MYO15AQ9UKN7 3530 aa0.59□□□□□ -2.32
LINC01564-201ENST00000448327 PKHD1P08F94 4074 aa0.59□□□□□ -2.32
LINC01564-201ENST00000448327 CEP250Q9BV73 2442 aa0.58□□□□□ -2.32
LINC01564-201ENST00000448327 ATRQ13535 2644 aa0.58□□□□□ -2.32
LINC01564-201ENST00000448327 CDH23Q9H251 3354 aa0.58□□□□□ -2.32
LINC01564-201ENST00000448327 ITPR3Q14573 2671 aa0.58□□□□□ -2.32
LINC01564-201ENST00000448327 ADGRG4Q8IZF6 3080 aa0.58□□□□□ -2.32
LINC01564-201ENST00000448327 FBN2P35556 2912 aa0.58□□□□□ -2.32
LINC01564-201ENST00000448327 TNXBP22105 4242 aa0.58□□□□□ -2.32
LINC01564-201ENST00000448327 TENM4Q6N022 2769 aa0.58□□□□□ -2.32
LINC01564-201ENST00000448327 HIVEP3Q5T1R4 2406 aa0.58□□□□□ -2.32
LINC01564-201ENST00000448327 HECTD1Q9ULT8 2610 aa0.58□□□□□ -2.32
LINC01564-201ENST00000448327 STARD9Q9P2P6 4700 aa0.58□□□□□ -2.32
LINC01564-201ENST00000448327 TACC2O95359 2948 aa0.58□□□□□ -2.32
LINC01564-201ENST00000448327 PKD1P98161 4303 aa0.57□□□□□ -2.32
LINC01564-201ENST00000448327 LRP1Q07954 4544 aaKnown RBP0.57□□□□□ -2.32
LINC01564-201ENST00000448327 UTP20O75691 2785 aaKnown RBP0.57□□□□□ -2.32
LINC01564-201ENST00000448327 ZANQ9Y493 2812 aa0.57□□□□□ -2.32
LINC01564-201ENST00000448327 PTPN13Q12923 2485 aa0.57□□□□□ -2.32
LINC01564-201ENST00000448327 H3BNG1 76 aa0.57□□□□□ -2.32
LINC01564-201ENST00000448327 SPINK6Q6UWN8 80 aa0.57□□□□□ -2.32
LINC01564-201ENST00000448327 NBASA2RRP1 2371 aa0.57□□□□□ -2.32
LINC01564-201ENST00000448327 CSMD2Q7Z408 3487 aa0.57□□□□□ -2.32
LINC01564-201ENST00000448327 APCP25054 2843 aa0.57□□□□□ -2.32
LINC01564-201ENST00000448327 SRRM2Q9UQ35 2752 aaKnown RBP0.56□□□□□ -2.32
LINC01564-201ENST00000448327 SMR3AQ99954 134 aa0.56□□□□□ -2.32
LINC01564-201ENST00000448327 TEP1Q99973 2627 aaKnown RBP0.56□□□□□ -2.32
LINC01564-201ENST00000448327 TEX15Q9BXT5 2789 aa0.56□□□□□ -2.32
LINC01564-201ENST00000448327 DYNC1H1Q14204 4646 aaKnown RBP0.55□□□□□ -2.32
LINC01564-201ENST00000448327 M0QZ58 72 aa0.55□□□□□ -2.32
LINC01564-201ENST00000448327 USP9YO00507 2555 aaPredicted RBP0.55□□□□□ -2.32
LINC01564-201ENST00000448327 SETD2Q9BYW2 2564 aaPredicted RBP0.55□□□□□ -2.32
LINC01564-201ENST00000448327 CHD8Q9HCK8 2581 aa0.55□□□□□ -2.32
LINC01564-201ENST00000448327 SVEP1Q4LDE5 3571 aa0.55□□□□□ -2.32
LINC01564-201ENST00000448327 HIVEP1P15822 2718 aa0.55□□□□□ -2.32
LINC01564-201ENST00000448327 CREBBPQ92793 2442 aa0.54□□□□□ -2.32
LINC01564-201ENST00000448327 CEP290O15078 2479 aa0.54□□□□□ -2.32
LINC01564-201ENST00000448327 KRTAP2-3P0C7H8 128 aa0.54□□□□□ -2.32
LINC01564-201ENST00000448327 KRTAP2-4Q9BYR9 128 aa0.54□□□□□ -2.32
LINC01564-201ENST00000448327 KRTAP2-1Q9BYU5 128 aa0.54□□□□□ -2.32
LINC01564-201ENST00000448327 HERC1Q15751 4861 aa0.54□□□□□ -2.32
LINC01564-201ENST00000448327 LPAP08519 4548 aa0.54□□□□□ -2.32
LINC01564-201ENST00000448327 EYSQ5T1H1 3165 aa0.54□□□□□ -2.32
LINC01564-201ENST00000448327 NAV2Q8IVL1 2488 aa0.54□□□□□ -2.32
LINC01564-201ENST00000448327 CACNA1AO00555 2505 aa0.54□□□□□ -2.32
LINC01564-201ENST00000448327 APC2O95996 2303 aa0.53□□□□□ -2.32
LINC01564-201ENST00000448327 FAM186AA6NE01 2351 aa0.53□□□□□ -2.32
LINC01564-201ENST00000448327 SPG11Q96JI7 2443 aa0.53□□□□□ -2.32
LINC01564-201ENST00000448327 TGP01266 2768 aa0.53□□□□□ -2.32
LINC01564-201ENST00000448327 RIF1Q5UIP0 2472 aaKnown RBP0.52□□□□□ -2.33
LINC01564-201ENST00000448327 DEFB4AO15263 64 aa0.52□□□□□ -2.33
LINC01564-201ENST00000448327 RPS29P62273 56 aaKnown RBP0.52□□□□□ -2.33
LINC01564-201ENST00000448327 DEFB135Q30KP9 77 aa0.52□□□□□ -2.33
LINC01564-201ENST00000448327 FAT1Q14517 4588 aa0.52□□□□□ -2.33
LINC01564-201ENST00000448327 ANKHD1Q8IWZ3 2542 aaKnown RBP0.52□□□□□ -2.33
LINC01564-201ENST00000448327 USP9XQ93008 2570 aaPredicted RBP0.51□□□□□ -2.33
LINC01564-201ENST00000448327 ZFYVE26Q68DK2 2539 aa0.51□□□□□ -2.33
LINC01564-201ENST00000448327 KRTAP8-1Q8IUC2 63 aa0.51□□□□□ -2.33
LINC01564-201ENST00000448327 PKD1L1Q8TDX9 2849 aa0.51□□□□□ -2.33
LINC01564-201ENST00000448327 STAB1Q9NY15 2570 aa0.51□□□□□ -2.33
LINC01564-201ENST00000448327 MXRA5Q9NR99 2828 aa0.51□□□□□ -2.33
LINC01564-201ENST00000448327 NBEAL2Q6ZNJ1 2754 aa0.51□□□□□ -2.33
LINC01564-201ENST00000448327 EPG5Q9HCE0 2579 aa0.51□□□□□ -2.33
LINC01564-201ENST00000448327 PKD1L2Q7Z442 2459 aa0.5□□□□□ -2.33
LINC01564-201ENST00000448327 AHNAKQ09666 5890 aaKnown RBP0.5□□□□□ -2.33
LINC01564-201ENST00000448327 NBEAL1Q6ZS30 2694 aa0.5□□□□□ -2.33
LINC01564-201ENST00000448327 GCN1Q92616 2671 aaKnown RBP0.5□□□□□ -2.33
LINC01564-201ENST00000448327 SPART-AS1P0CW21 52 aa0.5□□□□□ -2.33
LINC01564-201ENST00000448327 HTN3P15516 51 aa0.5□□□□□ -2.33
LINC01564-201ENST00000448327 TLN1Q9Y490 2541 aaKnown RBP0.5□□□□□ -2.33
LINC01564-201ENST00000448327 MUC5BQ9HC84 5762 aaPredicted RBP0.5□□□□□ -2.33
LINC01564-201ENST00000448327 MUC17Q685J3 4493 aa0.49□□□□□ -2.33
LINC01564-201ENST00000448327 UNC79Q9P2D8 2635 aa0.49□□□□□ -2.33
LINC01564-201ENST00000448327 STAB2Q8WWQ8 2551 aa0.49□□□□□ -2.33
LINC01564-201ENST00000448327 TNP1P09430 55 aa0.49□□□□□ -2.33
LINC01564-201ENST00000448327 KRTAP19-3Q7Z4W3 81 aa0.49□□□□□ -2.33
LINC01564-201ENST00000448327 TLN2Q9Y4G6 2542 aa0.49□□□□□ -2.33
LINC01564-201ENST00000448327 CENPEQ02224 2701 aa0.49□□□□□ -2.33
LINC01564-201ENST00000448327 USP24Q9UPU5 2620 aa0.49□□□□□ -2.33
LINC01564-201ENST00000448327 LRP1BQ9NZR2 4599 aa0.48□□□□□ -2.33
LINC01564-201ENST00000448327 LRP2P98164 4655 aa0.48□□□□□ -2.33
LINC01564-201ENST00000448327 ITPR2Q14571 2701 aa0.48□□□□□ -2.33
LINC01564-201ENST00000448327 DOPEY1Q5JWR5 2465 aa0.47□□□□□ -2.33
LINC01564-201ENST00000448327 SONP18583 2426 aaKnown RBP0.47□□□□□ -2.33
LINC01564-201ENST00000448327 DMBT1Q9UGM3 2413 aaPredicted RBP0.47□□□□□ -2.33
LINC01564-201ENST00000448327 KRTAP19-5Q3LI72 72 aa0.47□□□□□ -2.33
LINC01564-201ENST00000448327 LRRK2Q5S007 2527 aa0.47□□□□□ -2.33
LINC01564-201ENST00000448327 MTORP42345 2549 aa0.46□□□□□ -2.34
LINC01564-201ENST00000448327 CFAP46Q8IYW2 2715 aa0.46□□□□□ -2.34
LINC01564-201ENST00000448327 ANKRD11Q6UB99 2663 aaPredicted RBP0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms