RNA–Protein interactions for RNA: ENST00000448327.1

LINC01564-201, Transcript of long intergenic non-protein coding RNA 1564, humanhuman

TSL 3 BASIC

Gene LINC01564, Length 566 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01564-201ENST00000448327 AEBP2Q6ZN18 517 aaPredicted RBP23.49■■□□□ 1.35
LINC01564-201ENST00000448327 CHIC1Q5VXU3 224 aa22.11■■□□□ 1.13
LINC01564-201ENST00000448327 SENP3Q9H4L4 574 aaPredicted RBP20.14■□□□□ 0.81
LINC01564-201ENST00000448327 PHF23Q9BUL5 403 aaPredicted RBP19.83■□□□□ 0.77
LINC01564-201ENST00000448327 FOXD1Q16676 465 aa18.76■□□□□ 0.59
LINC01564-201ENST00000448327 MSH5O43196 834 aa17.69■□□□□ 0.42
LINC01564-201ENST00000448327 PLPPR3Q6T4P5 718 aa17.62■□□□□ 0.41
LINC01564-201ENST00000448327 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
LINC01564-201ENST00000448327 PIAS4Q8N2W9 510 aaPredicted RBP17.55■□□□□ 0.4
LINC01564-201ENST00000448327 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
LINC01564-201ENST00000448327 ADRA2BP18089 450 aa17.32■□□□□ 0.36
LINC01564-201ENST00000448327 MAPK8IP2Q13387 824 aaPredicted RBP15.97■□□□□ 0.15
LINC01564-201ENST00000448327 SCAF1Q9H7N4 1312 aaKnown RBP15.91■□□□□ 0.14
LINC01564-201ENST00000448327 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
LINC01564-201ENST00000448327 DCAF8L1A6NGE4 600 aa15.4■□□□□ 0.06
LINC01564-201ENST00000448327 PPP4R3CPQ6ZMV5 832 aa15.4■□□□□ 0.06
LINC01564-201ENST00000448327 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
LINC01564-201ENST00000448327 HOXD11P31277 338 aaPredicted RBP15.21■□□□□ 0.03
LINC01564-201ENST00000448327 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
LINC01564-201ENST00000448327 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
LINC01564-201ENST00000448327 RNF39Q9H2S5 420 aa15.03■□□□□ -0
LINC01564-201ENST00000448327 C1QBPQ07021 282 aaKnown RBP14.82□□□□□ -0.04
LINC01564-201ENST00000448327 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
LINC01564-201ENST00000448327 DNAJC5BQ9UF47 199 aa14.7□□□□□ -0.06
LINC01564-201ENST00000448327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.6□□□□□ -0.07
LINC01564-201ENST00000448327 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.09
LINC01564-201ENST00000448327 U3KPZ7 1027 aaPredicted RBP14.2□□□□□ -0.14
LINC01564-201ENST00000448327 CAPN15O75808 1086 aa14.13□□□□□ -0.15
LINC01564-201ENST00000448327 SPINK5Q9NQ38 1064 aaPredicted RBP14.07□□□□□ -0.16
LINC01564-201ENST00000448327 KCNA4P22459 653 aa14.05□□□□□ -0.16
LINC01564-201ENST00000448327 DSG3P32926 999 aa14.01□□□□□ -0.17
LINC01564-201ENST00000448327 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
LINC01564-201ENST00000448327 APLP2Q06481 763 aa13.86□□□□□ -0.19
LINC01564-201ENST00000448327 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
LINC01564-201ENST00000448327 ZNF219Q9P2Y4 722 aaPredicted RBP13.79□□□□□ -0.2
LINC01564-201ENST00000448327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.78□□□□□ -0.2
LINC01564-201ENST00000448327 HNRNPUL2Q1KMD3 747 aaKnown RBP13.78□□□□□ -0.2
LINC01564-201ENST00000448327 POTEHQ6S545 545 aa13.78□□□□□ -0.2
LINC01564-201ENST00000448327 ABCB7O75027 752 aa13.77□□□□□ -0.21
LINC01564-201ENST00000448327 SAMD1Q6SPF0 538 aaPredicted RBP13.67□□□□□ -0.22
LINC01564-201ENST00000448327 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.25
LINC01564-201ENST00000448327 RBM42Q9BTD8 480 aaKnown RBP13.43□□□□□ -0.26
LINC01564-201ENST00000448327 POLA2Q14181 598 aa13.39□□□□□ -0.27
LINC01564-201ENST00000448327 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
LINC01564-201ENST00000448327 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
LINC01564-201ENST00000448327 FOXD4L1Q9NU39 408 aa13.2□□□□□ -0.3
LINC01564-201ENST00000448327 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
LINC01564-201ENST00000448327 ZBTB12Q9Y330 459 aaPredicted RBP13.11□□□□□ -0.31
LINC01564-201ENST00000448327 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
LINC01564-201ENST00000448327 OSCARQ8IYS5 282 aa12.97□□□□□ -0.33
LINC01564-201ENST00000448327 REM2Q8IYK8 340 aaPredicted RBP12.92□□□□□ -0.34
LINC01564-201ENST00000448327 ZBTB22O15209 634 aa12.87□□□□□ -0.35
LINC01564-201ENST00000448327 PIP4P2Q8N4L2 257 aa12.82□□□□□ -0.36
LINC01564-201ENST00000448327 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
LINC01564-201ENST00000448327 PITPNM1O00562 1244 aa12.79□□□□□ -0.36
LINC01564-201ENST00000448327 ATXN8OSP0DMR3 200 aa12.79□□□□□ -0.36
LINC01564-201ENST00000448327 HAX1O00165 279 aa12.72□□□□□ -0.37
LINC01564-201ENST00000448327 FBLN2P98095 1184 aa12.72□□□□□ -0.37
LINC01564-201ENST00000448327 FXR2P51116 673 aaKnown RBP eCLIP12.69□□□□□ -0.38
LINC01564-201ENST00000448327 SPDYE2BA6NHP3 402 aa12.66□□□□□ -0.38
LINC01564-201ENST00000448327 SPDYE6P0CI01 402 aa12.66□□□□□ -0.38
LINC01564-201ENST00000448327 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
LINC01564-201ENST00000448327 CLEC11AQ9Y240 323 aa12.56□□□□□ -0.4
LINC01564-201ENST00000448327 SPDYE1Q8NFV5 336 aaPredicted RBP12.52□□□□□ -0.41
LINC01564-201ENST00000448327 ZNF692Q9BU19 519 aaPredicted RBP12.51□□□□□ -0.41
LINC01564-201ENST00000448327 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
LINC01564-201ENST00000448327 PRKAR2AP13861 404 aaKnown RBP12.48□□□□□ -0.41
LINC01564-201ENST00000448327 EVX2Q03828 476 aa12.44□□□□□ -0.42
LINC01564-201ENST00000448327 SSUH2Q9Y2M2 353 aa12.42□□□□□ -0.42
LINC01564-201ENST00000448327 PABPN1Q86U42 306 aaKnown RBP eCLIP12.3□□□□□ -0.44
LINC01564-201ENST00000448327 C19orf67A6NJJ6 358 aa12.29□□□□□ -0.44
LINC01564-201ENST00000448327 PRR29P0C7W0 189 aa12.29□□□□□ -0.44
LINC01564-201ENST00000448327 CHADLQ6NUI6 762 aa12.29□□□□□ -0.44
LINC01564-201ENST00000448327 GABBR2O75899 941 aa12.19□□□□□ -0.46
LINC01564-201ENST00000448327 CSRNP3Q8WYN3 585 aa12.09□□□□□ -0.47
LINC01564-201ENST00000448327 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
LINC01564-201ENST00000448327 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
LINC01564-201ENST00000448327 LHX8Q68G74 356 aa12.03□□□□□ -0.48
LINC01564-201ENST00000448327 CLCN6P51797 869 aa11.93□□□□□ -0.5
LINC01564-201ENST00000448327 STAG3Q9UJ98 1225 aa11.93□□□□□ -0.5
LINC01564-201ENST00000448327 EHMT2Q96KQ7 1210 aa11.92□□□□□ -0.5
LINC01564-201ENST00000448327 DCBLD2Q96PD2 775 aa11.89□□□□□ -0.51
LINC01564-201ENST00000448327 POTEIP0CG38 1075 aa11.88□□□□□ -0.51
LINC01564-201ENST00000448327 ZRANB1Q9UGI0 708 aa11.88□□□□□ -0.51
LINC01564-201ENST00000448327 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
LINC01564-201ENST00000448327 CREBZFQ9NS37 354 aa11.86□□□□□ -0.51
LINC01564-201ENST00000448327 ZNF579Q8NAF0 562 aaKnown RBP11.84□□□□□ -0.51
LINC01564-201ENST00000448327 PAK3O75914 559 aaPredicted RBP11.79□□□□□ -0.52
LINC01564-201ENST00000448327 GALR2O43603 387 aaPredicted RBP11.72□□□□□ -0.53
LINC01564-201ENST00000448327 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC01564-201ENST00000448327 PHF12Q96QT6 1004 aa11.68□□□□□ -0.54
LINC01564-201ENST00000448327 MNX1P50219 401 aaPredicted RBP11.59□□□□□ -0.55
LINC01564-201ENST00000448327 OTUD5Q96G74 571 aa11.52□□□□□ -0.57
LINC01564-201ENST00000448327 PLSCR2Q9NRY7 297 aa11.51□□□□□ -0.57
LINC01564-201ENST00000448327 MS4A3Q96HJ5 214 aa11.5□□□□□ -0.57
LINC01564-201ENST00000448327 TSPYL2Q9H2G4 693 aaPredicted RBP11.5□□□□□ -0.57
LINC01564-201ENST00000448327 POTEB2H3BUK9 544 aa11.49□□□□□ -0.57
LINC01564-201ENST00000448327 PELP1Q8IZL8 1130 aaKnown RBP11.49□□□□□ -0.57
LINC01564-201ENST00000448327 METRNQ9UJH8 293 aa11.46□□□□□ -0.57
LINC01564-201ENST00000448327 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms