RNA–Protein interactions for RNA: ENST00000424362.5

BRPF1-203, Transcript of bromodomain and PHD finger containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BRPF1, Length 4,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-203ENST00000424362 DNAH11Q96DT5 4516 aa7.79□□□□□ -1.16
BRPF1-203ENST00000424362 KRTAP4-5Q9BYR2 181 aa7.78□□□□□ -1.16
BRPF1-203ENST00000424362 VPS13DQ5THJ4 4388 aa7.74□□□□□ -1.17
BRPF1-203ENST00000424362 DNAH10Q8IVF4 4471 aa7.74□□□□□ -1.17
BRPF1-203ENST00000424362 DNAH17Q9UFH2 4485 aa7.72□□□□□ -1.17
BRPF1-203ENST00000424362 LORP23490 312 aaPredicted RBP7.67□□□□□ -1.18
BRPF1-203ENST00000424362 KRTAP23-1A1A580 65 aa7.61□□□□□ -1.19
BRPF1-203ENST00000424362 DNHD1Q96M86 4753 aa7.6□□□□□ -1.19
BRPF1-203ENST00000424362 STARD9Q9P2P6 4700 aa7.56□□□□□ -1.2
BRPF1-203ENST00000424362 KRTAP10-12P60413 245 aa7.52□□□□□ -1.21
BRPF1-203ENST00000424362 DYNC1H1Q14204 4646 aaKnown RBP7.51□□□□□ -1.21
BRPF1-203ENST00000424362 DNAH8Q96JB1 4490 aa7.49□□□□□ -1.21
BRPF1-203ENST00000424362 DNAH2Q9P225 4427 aa7.49□□□□□ -1.21
BRPF1-203ENST00000424362 INE1O15225 51 aa7.49□□□□□ -1.21
BRPF1-203ENST00000424362 FAT1Q14517 4588 aa7.48□□□□□ -1.21
BRPF1-203ENST00000424362 LRP1BQ9NZR2 4599 aa7.46□□□□□ -1.21
BRPF1-203ENST00000424362 DNAH3Q8TD57 4116 aa7.43□□□□□ -1.22
BRPF1-203ENST00000424362 KRTAP12-3P60328 96 aa7.41□□□□□ -1.22
BRPF1-203ENST00000424362 LCE3AQ5TA76 89 aa7.4□□□□□ -1.22
BRPF1-203ENST00000424362 DYNC2H1Q8NCM8 4307 aaKnown RBP7.38□□□□□ -1.23
BRPF1-203ENST00000424362 PRKDCP78527 4128 aaKnown RBP7.34□□□□□ -1.23
BRPF1-203ENST00000424362 SACSQ9NZJ4 4579 aa7.33□□□□□ -1.24
BRPF1-203ENST00000424362 KRTAP4-1Q9BYQ7 146 aa7.33□□□□□ -1.24
BRPF1-203ENST00000424362 ANK2Q01484 3957 aa7.27□□□□□ -1.25
BRPF1-203ENST00000424362 FAT2Q9NYQ8 4349 aa7.25□□□□□ -1.25
BRPF1-203ENST00000424362 KMT2AQ03164 3969 aa7.23□□□□□ -1.25
BRPF1-203ENST00000424362 RYR1P21817 5038 aa7.22□□□□□ -1.25
BRPF1-203ENST00000424362 VPS13BQ7Z7G8 4022 aa7.15□□□□□ -1.26
BRPF1-203ENST00000424362 APOBP04114 4563 aaKnown RBP7.13□□□□□ -1.27
BRPF1-203ENST00000424362 MYCBP2O75592 4640 aa7.11□□□□□ -1.27
BRPF1-203ENST00000424362 SPRR2GQ9BYE4 73 aa7.07□□□□□ -1.28
BRPF1-203ENST00000424362 LYSTQ99698 3801 aa7.06□□□□□ -1.28
BRPF1-203ENST00000424362 KIAA1109Q2LD37 5005 aa7.03□□□□□ -1.28
BRPF1-203ENST00000424362 CMYA5Q8N3K9 4069 aa7.03□□□□□ -1.28
BRPF1-203ENST00000424362 MT1HP80294 61 aa7.01□□□□□ -1.29
BRPF1-203ENST00000424362 FRAS1Q86XX4 4008 aa6.99□□□□□ -1.29
BRPF1-203ENST00000424362 MT2AP02795 61 aa6.97□□□□□ -1.29
BRPF1-203ENST00000424362 HECTD4Q9Y4D8 3996 aa6.96□□□□□ -1.29
BRPF1-203ENST00000424362 DNAH6Q9C0G6 4158 aa6.96□□□□□ -1.29
BRPF1-203ENST00000424362 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
BRPF1-203ENST00000424362 KRTAP17-1Q9BYP8 105 aa6.91□□□□□ -1.3
BRPF1-203ENST00000424362 RYR3Q15413 4870 aa6.9□□□□□ -1.31
BRPF1-203ENST00000424362 DNAH7Q8WXX0 4024 aa6.9□□□□□ -1.31
BRPF1-203ENST00000424362 LRP1Q07954 4544 aaKnown RBP6.89□□□□□ -1.31
BRPF1-203ENST00000424362 MT1FP04733 61 aa6.85□□□□□ -1.31
BRPF1-203ENST00000424362 RYR2Q92736 4967 aa6.83□□□□□ -1.32
BRPF1-203ENST00000424362 KRTAP8-1Q8IUC2 63 aa6.83□□□□□ -1.32
BRPF1-203ENST00000424362 FAT3Q8TDW7 4589 aa6.8□□□□□ -1.32
BRPF1-203ENST00000424362 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.34
BRPF1-203ENST00000424362 HYDINQ4G0P3 5121 aa6.7□□□□□ -1.34
BRPF1-203ENST00000424362 LRP2P98164 4655 aa6.64□□□□□ -1.35
BRPF1-203ENST00000424362 KRTAP10-5P60370 271 aa6.63□□□□□ -1.35
BRPF1-203ENST00000424362 KRTAP19-5Q3LI72 72 aa6.63□□□□□ -1.35
BRPF1-203ENST00000424362 KRTAP19-8Q3LI54 63 aa6.61□□□□□ -1.35
BRPF1-203ENST00000424362 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
BRPF1-203ENST00000424362 PKHD1P08F94 4074 aa6.57□□□□□ -1.36
BRPF1-203ENST00000424362 HERC2O95714 4834 aa6.53□□□□□ -1.36
BRPF1-203ENST00000424362 HSPG2P98160 4391 aa6.51□□□□□ -1.37
BRPF1-203ENST00000424362 SPRR5A0A1B0GTR4 108 aa6.51□□□□□ -1.37
BRPF1-203ENST00000424362 PKD1P98161 4303 aa6.48□□□□□ -1.37
BRPF1-203ENST00000424362 KRTAP10-7P60409 375 aaPredicted RBP6.48□□□□□ -1.37
BRPF1-203ENST00000424362 MT1XP80297 61 aa6.44□□□□□ -1.38
BRPF1-203ENST00000424362 KRTAP19-4Q3LI73 84 aa6.43□□□□□ -1.38
BRPF1-203ENST00000424362 LCE2CQ5TA81 110 aa6.4□□□□□ -1.38
BRPF1-203ENST00000424362 MT1BP07438 61 aa6.4□□□□□ -1.39
BRPF1-203ENST00000424362 KRTAP9-8Q9BYQ0 159 aa6.38□□□□□ -1.39
BRPF1-203ENST00000424362 KMT2CQ8NEZ4 4911 aaKnown RBP6.34□□□□□ -1.4
BRPF1-203ENST00000424362 BIRC6Q9NR09 4857 aa6.3□□□□□ -1.4
BRPF1-203ENST00000424362 KRTAP19-2Q3LHN2 52 aa6.29□□□□□ -1.4
BRPF1-203ENST00000424362 PKHD1L1Q86WI1 4243 aa6.28□□□□□ -1.4
BRPF1-203ENST00000424362 HERC1Q15751 4861 aa6.26□□□□□ -1.41
BRPF1-203ENST00000424362 LPAP08519 4548 aa6.23□□□□□ -1.41
BRPF1-203ENST00000424362 TNXBP22105 4242 aa6.22□□□□□ -1.41
BRPF1-203ENST00000424362 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
BRPF1-203ENST00000424362 SPRR2FQ96RM1 72 aa6.18□□□□□ -1.42
BRPF1-203ENST00000424362 PCLOQ9Y6V0 5065 aa6.18□□□□□ -1.42
BRPF1-203ENST00000424362 MUC17Q685J3 4493 aa6.16□□□□□ -1.42
BRPF1-203ENST00000424362 KRTAP4-8A0A0G2JLE6 195 aa6.09□□□□□ -1.43
BRPF1-203ENST00000424362 KRTAP4-8Q9BYQ9 185 aa6.09□□□□□ -1.43
BRPF1-203ENST00000424362 FLGP20930 4061 aaPredicted RBP6.04□□□□□ -1.44
BRPF1-203ENST00000424362 ABCA13Q86UQ4 5058 aa5.98□□□□□ -1.45
BRPF1-203ENST00000424362 EPPK1P58107 5090 aaKnown RBP5.95□□□□□ -1.46
BRPF1-203ENST00000424362 MT1GP13640 62 aa5.93□□□□□ -1.46
BRPF1-203ENST00000424362 KRTAP12-4P60329 112 aa5.92□□□□□ -1.46
BRPF1-203ENST00000424362 LCE2BO14633 110 aa5.9□□□□□ -1.47
BRPF1-203ENST00000424362 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
BRPF1-203ENST00000424362 SYNE1Q8NF91 8797 aaKnown RBP5.85□□□□□ -1.47
BRPF1-203ENST00000424362 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
BRPF1-203ENST00000424362 MT1LQ93083 61 aa5.8□□□□□ -1.48
BRPF1-203ENST00000424362 MT1EP04732 61 aa5.74□□□□□ -1.49
BRPF1-203ENST00000424362 UBR4Q5T4S7 5183 aa5.71□□□□□ -1.49
BRPF1-203ENST00000424362 FAT4Q6V0I7 4981 aa5.7□□□□□ -1.5
BRPF1-203ENST00000424362 SPRR2EP22531 72 aa5.7□□□□□ -1.5
BRPF1-203ENST00000424362 SPRR2BP35325 72 aa5.7□□□□□ -1.5
BRPF1-203ENST00000424362 SPRR2AP35326 72 aa5.7□□□□□ -1.5
BRPF1-203ENST00000424362 RNF213Q63HN8 5207 aa5.69□□□□□ -1.5
BRPF1-203ENST00000424362 KRTAP19-3Q7Z4W3 81 aa5.69□□□□□ -1.5
BRPF1-203ENST00000424362 HMCN2Q8NDA2 5059 aa5.68□□□□□ -1.5
BRPF1-203ENST00000424362 LCE3DQ9BYE3 92 aa5.63□□□□□ -1.51
BRPF1-203ENST00000424362 LCE3EQ5T5B0 92 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms