RNA–Protein interactions for RNA: ENST00000407838.7

VSTM2A-204, Transcript of V-set and transmembrane domain containing 2A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene VSTM2A, Length 3,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2A-204ENST00000407838 KRTAP12-1P59990 96 aa8.44□□□□□ -1.06
VSTM2A-204ENST00000407838 XP32Q5T750 250 aa8.42□□□□□ -1.06
VSTM2A-204ENST00000407838 KRTAP21-3Q3LHN1 58 aa8.39□□□□□ -1.07
VSTM2A-204ENST00000407838 PLAC4Q8WY50 150 aa8.37□□□□□ -1.07
VSTM2A-204ENST00000407838 PRKDCP78527 4128 aaKnown RBP8.33□□□□□ -1.08
VSTM2A-204ENST00000407838 KRTAP10-8P60410 259 aa8.29□□□□□ -1.08
VSTM2A-204ENST00000407838 FAT2Q9NYQ8 4349 aa8.28□□□□□ -1.08
VSTM2A-204ENST00000407838 DNHD1Q96M86 4753 aa8.18□□□□□ -1.1
VSTM2A-204ENST00000407838 M0QZ58 72 aa8.18□□□□□ -1.1
VSTM2A-204ENST00000407838 PKD1P98161 4303 aa8.11□□□□□ -1.11
VSTM2A-204ENST00000407838 R4GN34 69 aa8.05□□□□□ -1.12
VSTM2A-204ENST00000407838 FAT1Q14517 4588 aa8.05□□□□□ -1.12
VSTM2A-204ENST00000407838 SACSQ9NZJ4 4579 aa8.03□□□□□ -1.12
VSTM2A-204ENST00000407838 PKHD1P08F94 4074 aa8□□□□□ -1.13
VSTM2A-204ENST00000407838 HYDINQ4G0P3 5121 aa8□□□□□ -1.13
VSTM2A-204ENST00000407838 MYCBP2O75592 4640 aa7.98□□□□□ -1.13
VSTM2A-204ENST00000407838 DYNC1H1Q14204 4646 aaKnown RBP7.95□□□□□ -1.14
VSTM2A-204ENST00000407838 HSPG2P98160 4391 aa7.94□□□□□ -1.14
VSTM2A-204ENST00000407838 APOBP04114 4563 aaKnown RBP7.93□□□□□ -1.14
VSTM2A-204ENST00000407838 SEC61BP60468 96 aaKnown RBP7.88□□□□□ -1.15
VSTM2A-204ENST00000407838 PKHD1L1Q86WI1 4243 aa7.85□□□□□ -1.15
VSTM2A-204ENST00000407838 LRP1Q07954 4544 aaKnown RBP7.82□□□□□ -1.16
VSTM2A-204ENST00000407838 CAMK2N1Q7Z7J9 78 aa7.82□□□□□ -1.16
VSTM2A-204ENST00000407838 KRTAP10-4P60372 401 aaPredicted RBP7.81□□□□□ -1.16
VSTM2A-204ENST00000407838 PP632Q6XCG6 107 aa7.77□□□□□ -1.17
VSTM2A-204ENST00000407838 FAT3Q8TDW7 4589 aa7.77□□□□□ -1.17
VSTM2A-204ENST00000407838 LORP23490 312 aaPredicted RBP7.69□□□□□ -1.18
VSTM2A-204ENST00000407838 LPAP08519 4548 aa7.67□□□□□ -1.18
VSTM2A-204ENST00000407838 LRP2P98164 4655 aa7.52□□□□□ -1.21
VSTM2A-204ENST00000407838 Q5VSD8 79 aa7.49□□□□□ -1.21
VSTM2A-204ENST00000407838 TNXBP22105 4242 aa7.48□□□□□ -1.21
VSTM2A-204ENST00000407838 A0A1B0GVY2 172 aa7.48□□□□□ -1.21
VSTM2A-204ENST00000407838 TNP1P09430 55 aa7.45□□□□□ -1.22
VSTM2A-204ENST00000407838 PRO2289Q9P1D8 64 aa7.45□□□□□ -1.22
VSTM2A-204ENST00000407838 KMT2CQ8NEZ4 4911 aaKnown RBP7.45□□□□□ -1.22
VSTM2A-204ENST00000407838 SPRR5A0A1B0GTR4 108 aa7.34□□□□□ -1.23
VSTM2A-204ENST00000407838 MT1HL1P0DM35 61 aa7.21□□□□□ -1.25
VSTM2A-204ENST00000407838 RYR2Q92736 4967 aa7.19□□□□□ -1.26
VSTM2A-204ENST00000407838 RYR3Q15413 4870 aa7.18□□□□□ -1.26
VSTM2A-204ENST00000407838 INE1O15225 51 aa7.17□□□□□ -1.26
VSTM2A-204ENST00000407838 KRTAP23-1A1A580 65 aa7.11□□□□□ -1.27
VSTM2A-204ENST00000407838 RYR1P21817 5038 aa7.09□□□□□ -1.27
VSTM2A-204ENST00000407838 KRTAP17-1Q9BYP8 105 aa7.05□□□□□ -1.28
VSTM2A-204ENST00000407838 KRTAP4-1Q9BYQ7 146 aa7.01□□□□□ -1.29
VSTM2A-204ENST00000407838 LCE3AQ5TA76 89 aa6.94□□□□□ -1.3
VSTM2A-204ENST00000407838 EPPK1P58107 5090 aaKnown RBP6.93□□□□□ -1.3
VSTM2A-204ENST00000407838 KIAA1109Q2LD37 5005 aa6.93□□□□□ -1.3
VSTM2A-204ENST00000407838 ABCA13Q86UQ4 5058 aa6.91□□□□□ -1.3
VSTM2A-204ENST00000407838 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
VSTM2A-204ENST00000407838 BIRC6Q9NR09 4857 aa6.86□□□□□ -1.31
VSTM2A-204ENST00000407838 MUC2Q02817 5179 aa6.79□□□□□ -1.32
VSTM2A-204ENST00000407838 KRTAP19-2Q3LHN2 52 aa6.74□□□□□ -1.33
VSTM2A-204ENST00000407838 J3QL48 77 aa6.65□□□□□ -1.35
VSTM2A-204ENST00000407838 HERC2O95714 4834 aa6.64□□□□□ -1.35
VSTM2A-204ENST00000407838 FLGP20930 4061 aaPredicted RBP6.62□□□□□ -1.35
VSTM2A-204ENST00000407838 KRTAP4-5Q9BYR2 181 aa6.59□□□□□ -1.35
VSTM2A-204ENST00000407838 KRTAP8-1Q8IUC2 63 aa6.57□□□□□ -1.36
VSTM2A-204ENST00000407838 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
VSTM2A-204ENST00000407838 M0R2T5 61 aa6.54□□□□□ -1.36
VSTM2A-204ENST00000407838 PCLOQ9Y6V0 5065 aa6.51□□□□□ -1.37
VSTM2A-204ENST00000407838 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
VSTM2A-204ENST00000407838 SPRR2GQ9BYE4 73 aa6.5□□□□□ -1.37
VSTM2A-204ENST00000407838 KRTAP10-12P60413 245 aa6.43□□□□□ -1.38
VSTM2A-204ENST00000407838 HERC1Q15751 4861 aa6.42□□□□□ -1.38
VSTM2A-204ENST00000407838 FAT4Q6V0I7 4981 aa6.39□□□□□ -1.39
VSTM2A-204ENST00000407838 KRTAP10-10P60014 251 aa6.38□□□□□ -1.39
VSTM2A-204ENST00000407838 HMCN2Q8NDA2 5059 aa6.22□□□□□ -1.41
VSTM2A-204ENST00000407838 KRTAP10-5P60370 271 aa6.21□□□□□ -1.41
VSTM2A-204ENST00000407838 KRTAP10-7P60409 375 aaPredicted RBP6.19□□□□□ -1.42
VSTM2A-204ENST00000407838 MT1XP80297 61 aa6.19□□□□□ -1.42
VSTM2A-204ENST00000407838 MT1FP04733 61 aa6.17□□□□□ -1.42
VSTM2A-204ENST00000407838 UBR4Q5T4S7 5183 aa6.16□□□□□ -1.42
VSTM2A-204ENST00000407838 LCE3CQ5T5A8 94 aa6.15□□□□□ -1.42
VSTM2A-204ENST00000407838 LCE2CQ5TA81 110 aa6.12□□□□□ -1.43
VSTM2A-204ENST00000407838 MT2AP02795 61 aa6.11□□□□□ -1.43
VSTM2A-204ENST00000407838 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
VSTM2A-204ENST00000407838 MT1BP07438 61 aa6.04□□□□□ -1.44
VSTM2A-204ENST00000407838 KRTAP19-8Q3LI54 63 aa6.03□□□□□ -1.44
VSTM2A-204ENST00000407838 MT1HP80294 61 aa6□□□□□ -1.45
VSTM2A-204ENST00000407838 KRTAP9-6A8MVA2 160 aa6□□□□□ -1.45
VSTM2A-204ENST00000407838 RNF213Q63HN8 5207 aa5.94□□□□□ -1.46
VSTM2A-204ENST00000407838 KRTAP9-8Q9BYQ0 159 aa5.92□□□□□ -1.46
VSTM2A-204ENST00000407838 KMT2DO14686 5537 aa5.91□□□□□ -1.46
VSTM2A-204ENST00000407838 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
VSTM2A-204ENST00000407838 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
VSTM2A-204ENST00000407838 KRTAP2-1Q9BYU5 128 aa5.89□□□□□ -1.47
VSTM2A-204ENST00000407838 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
VSTM2A-204ENST00000407838 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
VSTM2A-204ENST00000407838 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
VSTM2A-204ENST00000407838 KRTAP12-4P60329 112 aa5.64□□□□□ -1.51
VSTM2A-204ENST00000407838 USH2AO75445 5202 aa5.62□□□□□ -1.51
VSTM2A-204ENST00000407838 KRTAP9-3Q9BYQ3 159 aa5.61□□□□□ -1.51
VSTM2A-204ENST00000407838 KRTAP19-7Q3SYF9 63 aa5.48□□□□□ -1.53
VSTM2A-204ENST00000407838 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
VSTM2A-204ENST00000407838 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
VSTM2A-204ENST00000407838 MT1LQ93083 61 aa5.41□□□□□ -1.54
VSTM2A-204ENST00000407838 LCE2BO14633 110 aa5.37□□□□□ -1.55
VSTM2A-204ENST00000407838 LCE2AQ5TA79 106 aaPredicted RBP5.36□□□□□ -1.55
VSTM2A-204ENST00000407838 MT1GP13640 62 aa5.31□□□□□ -1.56
VSTM2A-204ENST00000407838 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms