RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 P0C880 135 aa8.06□□□□□ -1.12
CCDC85A-201ENST00000407595 KRTAP4-5Q9BYR2 181 aa8.05□□□□□ -1.12
CCDC85A-201ENST00000407595 MYCBP2O75592 4640 aa8.05□□□□□ -1.12
CCDC85A-201ENST00000407595 FRAS1Q86XX4 4008 aa8.04□□□□□ -1.12
CCDC85A-201ENST00000407595 CAMK2N1Q7Z7J9 78 aa8.03□□□□□ -1.12
CCDC85A-201ENST00000407595 HYDINQ4G0P3 5121 aa8.03□□□□□ -1.12
CCDC85A-201ENST00000407595 KRTAP10-4P60372 401 aaPredicted RBP8.02□□□□□ -1.13
CCDC85A-201ENST00000407595 RYR1P21817 5038 aa7.98□□□□□ -1.13
CCDC85A-201ENST00000407595 DYNC2H1Q8NCM8 4307 aaKnown RBP7.96□□□□□ -1.14
CCDC85A-201ENST00000407595 TPRXLQ17RH7 258 aa7.94□□□□□ -1.14
CCDC85A-201ENST00000407595 KRTAP13-4Q3LI77 160 aa7.94□□□□□ -1.14
CCDC85A-201ENST00000407595 VPS13BQ7Z7G8 4022 aa7.93□□□□□ -1.14
CCDC85A-201ENST00000407595 PKHD1P08F94 4074 aa7.91□□□□□ -1.14
CCDC85A-201ENST00000407595 LUZP6Q538Z0 58 aa7.91□□□□□ -1.14
CCDC85A-201ENST00000407595 MT1HL1P0DM35 61 aa7.91□□□□□ -1.14
CCDC85A-201ENST00000407595 RYR3Q15413 4870 aa7.89□□□□□ -1.15
CCDC85A-201ENST00000407595 FAT3Q8TDW7 4589 aa7.89□□□□□ -1.15
CCDC85A-201ENST00000407595 LRP1Q07954 4544 aaKnown RBP7.88□□□□□ -1.15
CCDC85A-201ENST00000407595 KRTAP10-6P60371 365 aaPredicted RBP7.87□□□□□ -1.15
CCDC85A-201ENST00000407595 ALMS1Q8TCU4 4167 aa7.87□□□□□ -1.15
CCDC85A-201ENST00000407595 KMT2CQ8NEZ4 4911 aaKnown RBP7.86□□□□□ -1.15
CCDC85A-201ENST00000407595 SACSQ9NZJ4 4579 aa7.86□□□□□ -1.15
CCDC85A-201ENST00000407595 KRTAP12-2P59991 146 aa7.86□□□□□ -1.15
CCDC85A-201ENST00000407595 HECTD4Q9Y4D8 3996 aa7.85□□□□□ -1.15
CCDC85A-201ENST00000407595 APOBP04114 4563 aaKnown RBP7.82□□□□□ -1.16
CCDC85A-201ENST00000407595 A0A0A0MQY5 61 aa7.75□□□□□ -1.17
CCDC85A-201ENST00000407595 KRTAP3-3Q9BYR6 98 aa7.73□□□□□ -1.17
CCDC85A-201ENST00000407595 FAT2Q9NYQ8 4349 aa7.73□□□□□ -1.17
CCDC85A-201ENST00000407595 KRTAP12-1P59990 96 aa7.71□□□□□ -1.17
CCDC85A-201ENST00000407595 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
CCDC85A-201ENST00000407595 KRTAP17-1Q9BYP8 105 aa7.66□□□□□ -1.18
CCDC85A-201ENST00000407595 RYR2Q92736 4967 aa7.65□□□□□ -1.18
CCDC85A-201ENST00000407595 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
CCDC85A-201ENST00000407595 KRTAP15-1Q3LI76 137 aa7.51□□□□□ -1.21
CCDC85A-201ENST00000407595 LRP2P98164 4655 aa7.49□□□□□ -1.21
CCDC85A-201ENST00000407595 PKD1P98161 4303 aa7.45□□□□□ -1.22
CCDC85A-201ENST00000407595 KRTAP10-10P60014 251 aa7.44□□□□□ -1.22
CCDC85A-201ENST00000407595 HERC2O95714 4834 aa7.44□□□□□ -1.22
CCDC85A-201ENST00000407595 EPPK1P58107 5090 aaKnown RBP7.38□□□□□ -1.23
CCDC85A-201ENST00000407595 HSPG2P98160 4391 aa7.36□□□□□ -1.23
CCDC85A-201ENST00000407595 TNP1P09430 55 aa7.33□□□□□ -1.24
CCDC85A-201ENST00000407595 PP632Q6XCG6 107 aa7.31□□□□□ -1.24
CCDC85A-201ENST00000407595 KRTAP4-1Q9BYQ7 146 aa7.29□□□□□ -1.24
CCDC85A-201ENST00000407595 LPAP08519 4548 aa7.23□□□□□ -1.25
CCDC85A-201ENST00000407595 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
CCDC85A-201ENST00000407595 ABCA13Q86UQ4 5058 aa7.13□□□□□ -1.27
CCDC85A-201ENST00000407595 PKHD1L1Q86WI1 4243 aa7.02□□□□□ -1.29
CCDC85A-201ENST00000407595 BIRC6Q9NR09 4857 aa7.01□□□□□ -1.29
CCDC85A-201ENST00000407595 PCLOQ9Y6V0 5065 aa6.99□□□□□ -1.29
CCDC85A-201ENST00000407595 HERC1Q15751 4861 aa6.96□□□□□ -1.29
CCDC85A-201ENST00000407595 MUC2Q02817 5179 aa6.95□□□□□ -1.3
CCDC85A-201ENST00000407595 TNXBP22105 4242 aa6.91□□□□□ -1.3
CCDC85A-201ENST00000407595 RNF213Q63HN8 5207 aa6.88□□□□□ -1.31
CCDC85A-201ENST00000407595 FAT4Q6V0I7 4981 aa6.73□□□□□ -1.33
CCDC85A-201ENST00000407595 PRO2289Q9P1D8 64 aa6.72□□□□□ -1.33
CCDC85A-201ENST00000407595 UBR4Q5T4S7 5183 aa6.71□□□□□ -1.33
CCDC85A-201ENST00000407595 MT1HP80294 61 aa6.71□□□□□ -1.33
CCDC85A-201ENST00000407595 FSIP2Q5CZC0 6907 aa6.63□□□□□ -1.35
CCDC85A-201ENST00000407595 MT2AP02795 61 aa6.6□□□□□ -1.35
CCDC85A-201ENST00000407595 MT1FP04733 61 aa6.59□□□□□ -1.36
CCDC85A-201ENST00000407595 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
CCDC85A-201ENST00000407595 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.37
CCDC85A-201ENST00000407595 LCE2CQ5TA81 110 aa6.44□□□□□ -1.38
CCDC85A-201ENST00000407595 KRTAP10-12P60413 245 aa6.42□□□□□ -1.38
CCDC85A-201ENST00000407595 HMCN2Q8NDA2 5059 aa6.42□□□□□ -1.38
CCDC85A-201ENST00000407595 MUC17Q685J3 4493 aa6.42□□□□□ -1.38
CCDC85A-201ENST00000407595 KRTAP19-1Q8IUB9 90 aa6.38□□□□□ -1.39
CCDC85A-201ENST00000407595 KRTAP19-2Q3LHN2 52 aa6.38□□□□□ -1.39
CCDC85A-201ENST00000407595 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
CCDC85A-201ENST00000407595 FLGP20930 4061 aaPredicted RBP6.33□□□□□ -1.4
CCDC85A-201ENST00000407595 KRTAP12-3P60328 96 aa6.33□□□□□ -1.4
CCDC85A-201ENST00000407595 KRTAP9-8Q9BYQ0 159 aa6.26□□□□□ -1.41
CCDC85A-201ENST00000407595 INE1O15225 51 aa6.26□□□□□ -1.41
CCDC85A-201ENST00000407595 SPRR5A0A1B0GTR4 108 aa6.16□□□□□ -1.42
CCDC85A-201ENST00000407595 CRCT1Q9UGL9 99 aa6.14□□□□□ -1.43
CCDC85A-201ENST00000407595 MT1BP07438 61 aa6.1□□□□□ -1.43
CCDC85A-201ENST00000407595 KRTAP10-7P60409 375 aaPredicted RBP6.08□□□□□ -1.44
CCDC85A-201ENST00000407595 KRTAP8-1Q8IUC2 63 aa6.08□□□□□ -1.44
CCDC85A-201ENST00000407595 USH2AO75445 5202 aa6.04□□□□□ -1.44
CCDC85A-201ENST00000407595 MT1XP80297 61 aa6.02□□□□□ -1.45
CCDC85A-201ENST00000407595 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
CCDC85A-201ENST00000407595 KRTAP9-3Q9BYQ3 159 aa6.02□□□□□ -1.45
CCDC85A-201ENST00000407595 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
CCDC85A-201ENST00000407595 KRTAP4-8A0A0G2JLE6 195 aa5.95□□□□□ -1.46
CCDC85A-201ENST00000407595 KRTAP4-8Q9BYQ9 185 aa5.95□□□□□ -1.46
CCDC85A-201ENST00000407595 LCE2BO14633 110 aa5.95□□□□□ -1.46
CCDC85A-201ENST00000407595 KRTAP19-5Q3LI72 72 aa5.93□□□□□ -1.46
CCDC85A-201ENST00000407595 OBSCNQ5VST9 7968 aa5.83□□□□□ -1.48
CCDC85A-201ENST00000407595 LCE3CQ5T5A8 94 aa5.76□□□□□ -1.49
CCDC85A-201ENST00000407595 KMT2DO14686 5537 aa5.76□□□□□ -1.49
CCDC85A-201ENST00000407595 SPRR2FQ96RM1 72 aa5.71□□□□□ -1.49
CCDC85A-201ENST00000407595 LCE2AQ5TA79 106 aaPredicted RBP5.7□□□□□ -1.5
CCDC85A-201ENST00000407595 DSTQ03001 7570 aaKnown RBP5.7□□□□□ -1.5
CCDC85A-201ENST00000407595 SYNE1Q8NF91 8797 aaKnown RBP5.69□□□□□ -1.5
CCDC85A-201ENST00000407595 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
CCDC85A-201ENST00000407595 FCGBPQ9Y6R7 5405 aaPredicted RBP5.54□□□□□ -1.52
CCDC85A-201ENST00000407595 MT1GP13640 62 aa5.39□□□□□ -1.55
CCDC85A-201ENST00000407595 MUC12Q9UKN1 5478 aa5.35□□□□□ -1.55
CCDC85A-201ENST00000407595 SSPOA2VEC9 5147 aa5.34□□□□□ -1.55
CCDC85A-201ENST00000407595 SYNE2Q8WXH0 6885 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms