RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 KRTAP10-6P60371 365 aaPredicted RBP2.28□□□□□ -2.05
PCDH11X-207ENST00000406881 DNAH10Q8IVF4 4471 aa2.27□□□□□ -2.05
PCDH11X-207ENST00000406881 DNAH17Q9UFH2 4485 aa2.26□□□□□ -2.05
PCDH11X-207ENST00000406881 PLECQ15149 4684 aaKnown RBP2.26□□□□□ -2.05
PCDH11X-207ENST00000406881 LORP23490 312 aaPredicted RBP2.26□□□□□ -2.05
PCDH11X-207ENST00000406881 KRTAP12-1P59990 96 aa2.25□□□□□ -2.05
PCDH11X-207ENST00000406881 DNAH1Q9P2D7 4330 aa2.25□□□□□ -2.05
PCDH11X-207ENST00000406881 PRO2289Q9P1D8 64 aa2.25□□□□□ -2.05
PCDH11X-207ENST00000406881 KRTAP12-2P59991 146 aa2.24□□□□□ -2.05
PCDH11X-207ENST00000406881 COL7A1Q02388 2944 aa2.24□□□□□ -2.05
PCDH11X-207ENST00000406881 KRTAP4-5Q9BYR2 181 aa2.24□□□□□ -2.05
PCDH11X-207ENST00000406881 DNAH11Q96DT5 4516 aa2.24□□□□□ -2.05
PCDH11X-207ENST00000406881 LOC100996750A0A140TA64 210 aa2.24□□□□□ -2.05
PCDH11X-207ENST00000406881 KRTAP4-6Q9BYQ5 205 aa2.24□□□□□ -2.05
PCDH11X-207ENST00000406881 DNAH5Q8TE73 4624 aa2.22□□□□□ -2.05
PCDH11X-207ENST00000406881 PRKDCP78527 4128 aaKnown RBP2.22□□□□□ -2.05
PCDH11X-207ENST00000406881 KRTAP13-4Q3LI77 160 aa2.22□□□□□ -2.05
PCDH11X-207ENST00000406881 KRTAP15-1Q3LI76 137 aa2.21□□□□□ -2.06
PCDH11X-207ENST00000406881 LCE2CQ5TA81 110 aa2.2□□□□□ -2.06
PCDH11X-207ENST00000406881 LYSTQ99698 3801 aa2.2□□□□□ -2.06
PCDH11X-207ENST00000406881 DNAH2Q9P225 4427 aa2.2□□□□□ -2.06
PCDH11X-207ENST00000406881 DYNC1H1Q14204 4646 aaKnown RBP2.19□□□□□ -2.06
PCDH11X-207ENST00000406881 RYR3Q15413 4870 aa2.18□□□□□ -2.06
PCDH11X-207ENST00000406881 DYNC2H1Q8NCM8 4307 aaKnown RBP2.17□□□□□ -2.06
PCDH11X-207ENST00000406881 STARD9Q9P2P6 4700 aa2.17□□□□□ -2.06
PCDH11X-207ENST00000406881 DNAH7Q8WXX0 4024 aa2.16□□□□□ -2.06
PCDH11X-207ENST00000406881 KMT2CQ8NEZ4 4911 aaKnown RBP2.14□□□□□ -2.07
PCDH11X-207ENST00000406881 DNAH6Q9C0G6 4158 aa2.14□□□□□ -2.07
PCDH11X-207ENST00000406881 LRP1BQ9NZR2 4599 aa2.14□□□□□ -2.07
PCDH11X-207ENST00000406881 SACSQ9NZJ4 4579 aa2.13□□□□□ -2.07
PCDH11X-207ENST00000406881 HERC2O95714 4834 aa2.13□□□□□ -2.07
PCDH11X-207ENST00000406881 DNAH8Q96JB1 4490 aa2.12□□□□□ -2.07
PCDH11X-207ENST00000406881 FAT2Q9NYQ8 4349 aa2.12□□□□□ -2.07
PCDH11X-207ENST00000406881 FAT1Q14517 4588 aa2.09□□□□□ -2.07
PCDH11X-207ENST00000406881 KRTAP23-1A1A580 65 aa2.09□□□□□ -2.08
PCDH11X-207ENST00000406881 RYR2Q92736 4967 aa2.09□□□□□ -2.08
PCDH11X-207ENST00000406881 KRTAP4-1Q9BYQ7 146 aa2.08□□□□□ -2.08
PCDH11X-207ENST00000406881 PCLOQ9Y6V0 5065 aa2.07□□□□□ -2.08
PCDH11X-207ENST00000406881 FRAS1Q86XX4 4008 aa2.07□□□□□ -2.08
PCDH11X-207ENST00000406881 HECTD4Q9Y4D8 3996 aa2.06□□□□□ -2.08
PCDH11X-207ENST00000406881 RYR1P21817 5038 aa2.05□□□□□ -2.08
PCDH11X-207ENST00000406881 KRTAP9-6A0A140TA67 174 aa2.05□□□□□ -2.08
PCDH11X-207ENST00000406881 EPPK1P58107 5090 aaKnown RBP2.04□□□□□ -2.08
PCDH11X-207ENST00000406881 HYDINQ4G0P3 5121 aa2.04□□□□□ -2.08
PCDH11X-207ENST00000406881 KIAA1109Q2LD37 5005 aa2.03□□□□□ -2.08
PCDH11X-207ENST00000406881 INE1O15225 51 aa2.02□□□□□ -2.09
PCDH11X-207ENST00000406881 KRTAP10-12P60413 245 aa2.02□□□□□ -2.09
PCDH11X-207ENST00000406881 KRTAP4-8Q9BYQ9 185 aa2.02□□□□□ -2.09
PCDH11X-207ENST00000406881 KMT2AQ03164 3969 aa2.02□□□□□ -2.09
PCDH11X-207ENST00000406881 MT1HP80294 61 aa2.02□□□□□ -2.09
PCDH11X-207ENST00000406881 APOBP04114 4563 aaKnown RBP2.02□□□□□ -2.09
PCDH11X-207ENST00000406881 KRTAP4-12Q9BQ66 201 aa2.01□□□□□ -2.09
PCDH11X-207ENST00000406881 SPRR2GQ9BYE4 73 aa2.01□□□□□ -2.09
PCDH11X-207ENST00000406881 MT2AP02795 61 aa1.99□□□□□ -2.09
PCDH11X-207ENST00000406881 VPS13BQ7Z7G8 4022 aa1.99□□□□□ -2.09
PCDH11X-207ENST00000406881 PKD1P98161 4303 aa1.98□□□□□ -2.09
PCDH11X-207ENST00000406881 KRTAP9-2Q9BYQ4 174 aa1.97□□□□□ -2.09
PCDH11X-207ENST00000406881 HSPG2P98160 4391 aa1.97□□□□□ -2.09
PCDH11X-207ENST00000406881 KRTAP12-3P60328 96 aa1.96□□□□□ -2.1
PCDH11X-207ENST00000406881 FAT3Q8TDW7 4589 aa1.96□□□□□ -2.1
PCDH11X-207ENST00000406881 MYCBP2O75592 4640 aa1.95□□□□□ -2.1
PCDH11X-207ENST00000406881 LCE3AQ5TA76 89 aa1.95□□□□□ -2.1
PCDH11X-207ENST00000406881 MT1FP04733 61 aa1.94□□□□□ -2.1
PCDH11X-207ENST00000406881 HERC1Q15751 4861 aa1.94□□□□□ -2.1
PCDH11X-207ENST00000406881 PKHD1P08F94 4074 aa1.93□□□□□ -2.1
PCDH11X-207ENST00000406881 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.93□□□□□ -2.1
PCDH11X-207ENST00000406881 LRP1Q07954 4544 aaKnown RBP1.92□□□□□ -2.1
PCDH11X-207ENST00000406881 KRTAP19-8Q3LI54 63 aa1.91□□□□□ -2.1
PCDH11X-207ENST00000406881 ABCA13Q86UQ4 5058 aa1.91□□□□□ -2.1
PCDH11X-207ENST00000406881 KRTAP19-1Q8IUB9 90 aa1.9□□□□□ -2.11
PCDH11X-207ENST00000406881 PKHD1L1Q86WI1 4243 aa1.89□□□□□ -2.11
PCDH11X-207ENST00000406881 CRCT1Q9UGL9 99 aa1.87□□□□□ -2.11
PCDH11X-207ENST00000406881 KRTAP19-4Q3LI73 84 aa1.87□□□□□ -2.11
PCDH11X-207ENST00000406881 KRTAP8-1Q8IUC2 63 aa1.86□□□□□ -2.11
PCDH11X-207ENST00000406881 KRTAP19-2Q3LHN2 52 aa1.86□□□□□ -2.11
PCDH11X-207ENST00000406881 KRTAP9-9Q9BYP9 154 aa1.86□□□□□ -2.11
PCDH11X-207ENST00000406881 KRTAP9-4Q9BYQ2 154 aa1.86□□□□□ -2.11
PCDH11X-207ENST00000406881 KRTAP9-8Q9BYQ0 159 aa1.86□□□□□ -2.11
PCDH11X-207ENST00000406881 UBR4Q5T4S7 5183 aa1.84□□□□□ -2.11
PCDH11X-207ENST00000406881 MT1BP07438 61 aa1.82□□□□□ -2.12
PCDH11X-207ENST00000406881 LRP2P98164 4655 aa1.82□□□□□ -2.12
PCDH11X-207ENST00000406881 TNXBP22105 4242 aa1.81□□□□□ -2.12
PCDH11X-207ENST00000406881 KRTAP9-3Q9BYQ3 159 aa1.81□□□□□ -2.12
PCDH11X-207ENST00000406881 KRTAP10-5P60370 271 aa1.81□□□□□ -2.12
PCDH11X-207ENST00000406881 MT1XP80297 61 aa1.8□□□□□ -2.12
PCDH11X-207ENST00000406881 KRTAP9-7A8MTY7 169 aa1.8□□□□□ -2.12
PCDH11X-207ENST00000406881 KRTAP4-8A0A0G2JLE6 195 aa1.79□□□□□ -2.12
PCDH11X-207ENST00000406881 KRTAP19-5Q3LI72 72 aa1.79□□□□□ -2.12
PCDH11X-207ENST00000406881 MUC17Q685J3 4493 aa1.77□□□□□ -2.13
PCDH11X-207ENST00000406881 KRTAP4-7Q9BYR0 210 aa1.77□□□□□ -2.13
PCDH11X-207ENST00000406881 KRTAP10-7P60409 375 aaPredicted RBP1.77□□□□□ -2.13
PCDH11X-207ENST00000406881 LCE3CQ5T5A8 94 aa1.76□□□□□ -2.13
PCDH11X-207ENST00000406881 HMCN2Q8NDA2 5059 aa1.75□□□□□ -2.13
PCDH11X-207ENST00000406881 KRTAP4-2Q9BYR5 136 aa1.75□□□□□ -2.13
PCDH11X-207ENST00000406881 KRTAP4-9Q9BYQ8 210 aa1.75□□□□□ -2.13
PCDH11X-207ENST00000406881 SPRR2FQ96RM1 72 aa1.73□□□□□ -2.13
PCDH11X-207ENST00000406881 LPAP08519 4548 aa1.73□□□□□ -2.13
PCDH11X-207ENST00000406881 FLGP20930 4061 aaPredicted RBP1.72□□□□□ -2.13
PCDH11X-207ENST00000406881 KRTAP5-3Q6L8H2 238 aa1.72□□□□□ -2.13
PCDH11X-207ENST00000406881 RNF213Q63HN8 5207 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms