RNA–Protein interactions for RNA: ENST00000406533.7

KCNMA1-212, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-212ENST00000406533 KRTAP12-3P60328 96 aa3.53□□□□□ -1.84
KCNMA1-212ENST00000406533 DNHD1Q96M86 4753 aa3.51□□□□□ -1.85
KCNMA1-212ENST00000406533 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
KCNMA1-212ENST00000406533 VPS13CQ709C8 3753 aa3.5□□□□□ -1.85
KCNMA1-212ENST00000406533 CSMD2Q7Z408 3487 aa3.49□□□□□ -1.85
KCNMA1-212ENST00000406533 PLECQ15149 4684 aaKnown RBP3.49□□□□□ -1.85
KCNMA1-212ENST00000406533 VPS13DQ5THJ4 4388 aa3.48□□□□□ -1.85
KCNMA1-212ENST00000406533 SVEP1Q4LDE5 3571 aa3.45□□□□□ -1.86
KCNMA1-212ENST00000406533 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
KCNMA1-212ENST00000406533 CUBNO60494 3623 aa3.44□□□□□ -1.86
KCNMA1-212ENST00000406533 DYNC1H1Q14204 4646 aaKnown RBP3.43□□□□□ -1.86
KCNMA1-212ENST00000406533 DNAH3Q8TD57 4116 aa3.43□□□□□ -1.86
KCNMA1-212ENST00000406533 ZNF469Q96JG9 3925 aaPredicted RBP3.43□□□□□ -1.86
KCNMA1-212ENST00000406533 DNAH5Q8TE73 4624 aa3.43□□□□□ -1.86
KCNMA1-212ENST00000406533 DNAH17Q9UFH2 4485 aa3.39□□□□□ -1.87
KCNMA1-212ENST00000406533 CMYA5Q8N3K9 4069 aa3.38□□□□□ -1.87
KCNMA1-212ENST00000406533 BIRC6Q9NR09 4857 aa3.38□□□□□ -1.87
KCNMA1-212ENST00000406533 DNAH2Q9P225 4427 aa3.37□□□□□ -1.87
KCNMA1-212ENST00000406533 FAT2Q9NYQ8 4349 aa3.37□□□□□ -1.87
KCNMA1-212ENST00000406533 COL7A1Q02388 2944 aa3.37□□□□□ -1.87
KCNMA1-212ENST00000406533 PRKDCP78527 4128 aaKnown RBP3.36□□□□□ -1.87
KCNMA1-212ENST00000406533 KRTAP10-5P60370 271 aa3.33□□□□□ -1.88
KCNMA1-212ENST00000406533 STARD9Q9P2P6 4700 aa3.33□□□□□ -1.88
KCNMA1-212ENST00000406533 LRP1BQ9NZR2 4599 aa3.3□□□□□ -1.88
KCNMA1-212ENST00000406533 RYR2Q92736 4967 aa3.29□□□□□ -1.88
KCNMA1-212ENST00000406533 DNAH8Q96JB1 4490 aa3.29□□□□□ -1.88
KCNMA1-212ENST00000406533 MT1HP80294 61 aa3.29□□□□□ -1.88
KCNMA1-212ENST00000406533 CRCT1Q9UGL9 99 aa3.27□□□□□ -1.89
KCNMA1-212ENST00000406533 LORP23490 312 aaPredicted RBP3.27□□□□□ -1.89
KCNMA1-212ENST00000406533 DNAH7Q8WXX0 4024 aa3.25□□□□□ -1.89
KCNMA1-212ENST00000406533 RYR1P21817 5038 aa3.24□□□□□ -1.89
KCNMA1-212ENST00000406533 SACSQ9NZJ4 4579 aa3.22□□□□□ -1.89
KCNMA1-212ENST00000406533 HERC1Q15751 4861 aa3.22□□□□□ -1.89
KCNMA1-212ENST00000406533 RYR3Q15413 4870 aa3.21□□□□□ -1.89
KCNMA1-212ENST00000406533 KRTAP4-1Q9BYQ7 146 aa3.21□□□□□ -1.9
KCNMA1-212ENST00000406533 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.9
KCNMA1-212ENST00000406533 KRTAP8-1Q8IUC2 63 aa3.16□□□□□ -1.9
KCNMA1-212ENST00000406533 MT2AP02795 61 aa3.15□□□□□ -1.9
KCNMA1-212ENST00000406533 APOBP04114 4563 aaKnown RBP3.14□□□□□ -1.91
KCNMA1-212ENST00000406533 FAT1Q14517 4588 aa3.14□□□□□ -1.91
KCNMA1-212ENST00000406533 KRTAP19-4Q3LI73 84 aa3.14□□□□□ -1.91
KCNMA1-212ENST00000406533 PKHD1L1Q86WI1 4243 aa3.13□□□□□ -1.91
KCNMA1-212ENST00000406533 HSPG2P98160 4391 aa3.12□□□□□ -1.91
KCNMA1-212ENST00000406533 KMT2AQ03164 3969 aa3.1□□□□□ -1.91
KCNMA1-212ENST00000406533 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
KCNMA1-212ENST00000406533 HERC2O95714 4834 aa3.08□□□□□ -1.92
KCNMA1-212ENST00000406533 FAT3Q8TDW7 4589 aa3.08□□□□□ -1.92
KCNMA1-212ENST00000406533 KIAA1109Q2LD37 5005 aa3.08□□□□□ -1.92
KCNMA1-212ENST00000406533 VPS13BQ7Z7G8 4022 aa3.07□□□□□ -1.92
KCNMA1-212ENST00000406533 SPRR2GQ9BYE4 73 aa3.07□□□□□ -1.92
KCNMA1-212ENST00000406533 MT1FP04733 61 aa3.06□□□□□ -1.92
KCNMA1-212ENST00000406533 MYCBP2O75592 4640 aa3.04□□□□□ -1.92
KCNMA1-212ENST00000406533 CSMD3Q7Z407 3707 aa3.04□□□□□ -1.92
KCNMA1-212ENST00000406533 HECTD4Q9Y4D8 3996 aa3.04□□□□□ -1.92
KCNMA1-212ENST00000406533 PCLOQ9Y6V0 5065 aa3.04□□□□□ -1.92
KCNMA1-212ENST00000406533 FRAS1Q86XX4 4008 aa3.03□□□□□ -1.92
KCNMA1-212ENST00000406533 LCE2DQ5TA82 110 aaPredicted RBP3.03□□□□□ -1.92
KCNMA1-212ENST00000406533 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
KCNMA1-212ENST00000406533 LYSTQ99698 3801 aa2.99□□□□□ -1.93
KCNMA1-212ENST00000406533 HYDINQ4G0P3 5121 aa2.98□□□□□ -1.93
KCNMA1-212ENST00000406533 PKHD1P08F94 4074 aa2.96□□□□□ -1.93
KCNMA1-212ENST00000406533 PKD1P98161 4303 aa2.95□□□□□ -1.94
KCNMA1-212ENST00000406533 KRTAP19-5Q3LI72 72 aa2.95□□□□□ -1.94
KCNMA1-212ENST00000406533 KRTAP19-8Q3LI54 63 aa2.94□□□□□ -1.94
KCNMA1-212ENST00000406533 MUC17Q685J3 4493 aa2.94□□□□□ -1.94
KCNMA1-212ENST00000406533 LCE2CQ5TA81 110 aa2.93□□□□□ -1.94
KCNMA1-212ENST00000406533 KRTAP9-2Q9BYQ4 174 aa2.93□□□□□ -1.94
KCNMA1-212ENST00000406533 SPRR2FQ96RM1 72 aa2.91□□□□□ -1.94
KCNMA1-212ENST00000406533 KRTAP9-8Q9BYQ0 159 aa2.91□□□□□ -1.94
KCNMA1-212ENST00000406533 KRTAP9-6A0A140TA67 174 aa2.89□□□□□ -1.95
KCNMA1-212ENST00000406533 KMT2CQ8NEZ4 4911 aaKnown RBP2.88□□□□□ -1.95
KCNMA1-212ENST00000406533 EPPK1P58107 5090 aaKnown RBP2.87□□□□□ -1.95
KCNMA1-212ENST00000406533 KRTAP19-1Q8IUB9 90 aa2.87□□□□□ -1.95
KCNMA1-212ENST00000406533 KRTAP9-3Q9BYQ3 159 aa2.87□□□□□ -1.95
KCNMA1-212ENST00000406533 LOC100996750A0A140TA64 210 aa2.86□□□□□ -1.95
KCNMA1-212ENST00000406533 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
KCNMA1-212ENST00000406533 LCE2AQ5TA79 106 aaPredicted RBP2.85□□□□□ -1.95
KCNMA1-212ENST00000406533 SPRR2EP22531 72 aa2.85□□□□□ -1.95
KCNMA1-212ENST00000406533 SPRR2BP35325 72 aa2.85□□□□□ -1.95
KCNMA1-212ENST00000406533 SPRR2AP35326 72 aa2.85□□□□□ -1.95
KCNMA1-212ENST00000406533 LRP1Q07954 4544 aaKnown RBP2.84□□□□□ -1.95
KCNMA1-212ENST00000406533 ABCA13Q86UQ4 5058 aa2.84□□□□□ -1.96
KCNMA1-212ENST00000406533 KRTAP10-7P60409 375 aaPredicted RBP2.83□□□□□ -1.96
KCNMA1-212ENST00000406533 TNXBP22105 4242 aa2.82□□□□□ -1.96
KCNMA1-212ENST00000406533 KRTAP19-2Q3LHN2 52 aa2.82□□□□□ -1.96
KCNMA1-212ENST00000406533 MT3P25713 68 aa2.8□□□□□ -1.96
KCNMA1-212ENST00000406533 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
KCNMA1-212ENST00000406533 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
KCNMA1-212ENST00000406533 MT1BP07438 61 aa2.78□□□□□ -1.96
KCNMA1-212ENST00000406533 SPRR2DP22532 72 aa2.78□□□□□ -1.96
KCNMA1-212ENST00000406533 KRTAP19-6Q3LI70 58 aa2.78□□□□□ -1.96
KCNMA1-212ENST00000406533 LCE3BQ5TA77 95 aa2.74□□□□□ -1.97
KCNMA1-212ENST00000406533 LCE2BO14633 110 aa2.73□□□□□ -1.97
KCNMA1-212ENST00000406533 MT1XP80297 61 aa2.72□□□□□ -1.97
KCNMA1-212ENST00000406533 LRP2P98164 4655 aa2.71□□□□□ -1.98
KCNMA1-212ENST00000406533 PRM1P04553 51 aa2.66□□□□□ -1.98
KCNMA1-212ENST00000406533 FLGP20930 4061 aaPredicted RBP2.65□□□□□ -1.99
KCNMA1-212ENST00000406533 HMCN2Q8NDA2 5059 aa2.65□□□□□ -1.99
KCNMA1-212ENST00000406533 MT1GP13640 62 aa2.65□□□□□ -1.99
KCNMA1-212ENST00000406533 RNF213Q63HN8 5207 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms