RNA–Protein interactions for RNA: ENST00000406533.7

KCNMA1-212, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-212ENST00000406533 NISCHQ9Y2I1 1504 aa14.14□□□□□ -0.15
KCNMA1-212ENST00000406533 MYT1Q01538 1121 aa13.95□□□□□ -0.18
KCNMA1-212ENST00000406533 PELP1Q8IZL8 1130 aaKnown RBP13.88□□□□□ -0.19
KCNMA1-212ENST00000406533 DCAF8L2P0C7V8 631 aa13.39□□□□□ -0.27
KCNMA1-212ENST00000406533 CENPBP07199 599 aaPredicted RBP12.9□□□□□ -0.34
KCNMA1-212ENST00000406533 ERICH6Q7L0X2 663 aa12.87□□□□□ -0.35
KCNMA1-212ENST00000406533 TTBK1Q5TCY1 1321 aaPredicted RBP12.86□□□□□ -0.35
KCNMA1-212ENST00000406533 CCER1Q8TC90 406 aaPredicted RBP12.81□□□□□ -0.36
KCNMA1-212ENST00000406533 ZEB1P37275 1124 aaPredicted RBP12.63□□□□□ -0.39
KCNMA1-212ENST00000406533 PCGF6Q9BYE7 350 aa12.47□□□□□ -0.41
KCNMA1-212ENST00000406533 YTHDC1Q96MU7 727 aaKnown RBP12.43□□□□□ -0.42
KCNMA1-212ENST00000406533 ABCC9O60706 1549 aa12.38□□□□□ -0.43
KCNMA1-212ENST00000406533 HRCP23327 699 aa12.34□□□□□ -0.43
KCNMA1-212ENST00000406533 NEFLP07196 543 aa12.32□□□□□ -0.44
KCNMA1-212ENST00000406533 SUPT5HO00267 1087 aaKnown RBP12.28□□□□□ -0.44
KCNMA1-212ENST00000406533 CCDC180Q9P1Z9 1646 aa12.28□□□□□ -0.44
KCNMA1-212ENST00000406533 SHROOM4Q9ULL8 1493 aa12.25□□□□□ -0.45
KCNMA1-212ENST00000406533 RTL5Q5HYW3 569 aaPredicted RBP12.09□□□□□ -0.47
KCNMA1-212ENST00000406533 FAM9AQ8IZU1 332 aaPredicted RBP12.03□□□□□ -0.48
KCNMA1-212ENST00000406533 GLIPR1L2Q4G1C9 344 aa12□□□□□ -0.49
KCNMA1-212ENST00000406533 DAXXQ9UER7 740 aaPredicted RBP11.97□□□□□ -0.49
KCNMA1-212ENST00000406533 RB1CC1Q8TDY2 1594 aa11.94□□□□□ -0.5
KCNMA1-212ENST00000406533 APLP2Q06481 763 aa11.92□□□□□ -0.5
KCNMA1-212ENST00000406533 GTF3C3Q9Y5Q9 886 aa11.92□□□□□ -0.5
KCNMA1-212ENST00000406533 MYT1LQ9UL68 1186 aa11.9□□□□□ -0.5
KCNMA1-212ENST00000406533 TRIM26Q12899 539 aaPredicted RBP11.88□□□□□ -0.51
KCNMA1-212ENST00000406533 PABPN1Q86U42 306 aaKnown RBP eCLIP11.88□□□□□ -0.51
KCNMA1-212ENST00000406533 EIF5BO60841 1220 aaKnown RBP11.82□□□□□ -0.52
KCNMA1-212ENST00000406533 NACADO15069 1562 aa11.82□□□□□ -0.52
KCNMA1-212ENST00000406533 PPARGC1BQ86YN6 1023 aaKnown RBP11.81□□□□□ -0.52
KCNMA1-212ENST00000406533 ACIN1Q9UKV3 1341 aaKnown RBP11.79□□□□□ -0.52
KCNMA1-212ENST00000406533 EHMT2Q96KQ7 1210 aa11.78□□□□□ -0.52
KCNMA1-212ENST00000406533 DIEXFQ68CQ4 756 aaKnown RBP11.74□□□□□ -0.53
KCNMA1-212ENST00000406533 ZCCHC6Q5VYS8 1495 aaKnown RBP11.71□□□□□ -0.53
KCNMA1-212ENST00000406533 ZNF316A6NFI3 1004 aaPredicted RBP11.69□□□□□ -0.54
KCNMA1-212ENST00000406533 CLSPNQ9HAW4 1339 aa11.68□□□□□ -0.54
KCNMA1-212ENST00000406533 BCL11AQ9H165 835 aa11.65□□□□□ -0.54
KCNMA1-212ENST00000406533 CDK11AQ9UQ88 783 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-212ENST00000406533 SCRIBQ14160 1630 aa11.63□□□□□ -0.55
KCNMA1-212ENST00000406533 ANP32EQ9BTT0 268 aa11.57□□□□□ -0.56
KCNMA1-212ENST00000406533 SCAF1Q9H7N4 1312 aaKnown RBP11.53□□□□□ -0.56
KCNMA1-212ENST00000406533 DCAF1Q9Y4B6 1507 aa11.53□□□□□ -0.56
KCNMA1-212ENST00000406533 RANGAP1P46060 587 aaPredicted RBP11.51□□□□□ -0.57
KCNMA1-212ENST00000406533 ANP32AP39687 249 aaKnown RBP11.48□□□□□ -0.57
KCNMA1-212ENST00000406533 BCANQ96GW7 911 aa11.48□□□□□ -0.57
KCNMA1-212ENST00000406533 TRIM41Q8WV44 630 aa11.46□□□□□ -0.58
KCNMA1-212ENST00000406533 MYO15BQ96JP2 1530 aa11.45□□□□□ -0.58
KCNMA1-212ENST00000406533 NEUROD1Q13562 356 aa11.36□□□□□ -0.59
KCNMA1-212ENST00000406533 TNNT2P45379 298 aaPredicted RBP11.34□□□□□ -0.59
KCNMA1-212ENST00000406533 ANP32BQ92688 251 aaKnown RBP11.31□□□□□ -0.6
KCNMA1-212ENST00000406533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.28□□□□□ -0.6
KCNMA1-212ENST00000406533 SLC24A1O60721 1099 aa11.27□□□□□ -0.6
KCNMA1-212ENST00000406533 UBTFP17480 764 aaKnown RBP11.27□□□□□ -0.61
KCNMA1-212ENST00000406533 NBR1Q14596 966 aa11.26□□□□□ -0.61
KCNMA1-212ENST00000406533 ERICH6BQ5W0A0 696 aa11.26□□□□□ -0.61
KCNMA1-212ENST00000406533 ATP1B4Q9UN42 357 aaPredicted RBP11.25□□□□□ -0.61
KCNMA1-212ENST00000406533 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
KCNMA1-212ENST00000406533 BAZ1BQ9UIG0 1483 aaKnown RBP11.24□□□□□ -0.61
KCNMA1-212ENST00000406533 NCLP19338 710 aaKnown RBP11.24□□□□□ -0.61
KCNMA1-212ENST00000406533 ERCC6Q03468 1493 aa11.23□□□□□ -0.61
KCNMA1-212ENST00000406533 FKBP8Q14318 412 aa11.21□□□□□ -0.61
KCNMA1-212ENST00000406533 BAZ1AQ9NRL2 1556 aaPredicted RBP11.2□□□□□ -0.62
KCNMA1-212ENST00000406533 CDK11BP21127 795 aaKnown RBP11.18□□□□□ -0.62
KCNMA1-212ENST00000406533 FBLN2P98095 1184 aa11.18□□□□□ -0.62
KCNMA1-212ENST00000406533 ANP32CO43423 234 aa11.17□□□□□ -0.62
KCNMA1-212ENST00000406533 TRIM44Q96DX7 344 aaPredicted RBP11.17□□□□□ -0.62
KCNMA1-212ENST00000406533 SMARCA2P51531 1590 aa11.16□□□□□ -0.62
KCNMA1-212ENST00000406533 HNRNPUL2Q1KMD3 747 aaKnown RBP11.15□□□□□ -0.62
KCNMA1-212ENST00000406533 PRKCSHP14314 528 aaPredicted RBP11.15□□□□□ -0.62
KCNMA1-212ENST00000406533 CHIC1Q5VXU3 224 aa11.15□□□□□ -0.62
KCNMA1-212ENST00000406533 NPM2Q86SE8 214 aaKnown RBP11.15□□□□□ -0.63
KCNMA1-212ENST00000406533 LOC105371045A0A1W2PR82 267 aa11.12□□□□□ -0.63
KCNMA1-212ENST00000406533 CECR2Q9BXF3 1484 aa11.11□□□□□ -0.63
KCNMA1-212ENST00000406533 NEFMP07197 916 aa11.11□□□□□ -0.63
KCNMA1-212ENST00000406533 RTN4Q9NQC3 1192 aaKnown RBP11.08□□□□□ -0.64
KCNMA1-212ENST00000406533 DEKP35659 375 aaKnown RBP11.08□□□□□ -0.64
KCNMA1-212ENST00000406533 NAP1L5Q96NT1 182 aaPredicted RBP11.07□□□□□ -0.64
KCNMA1-212ENST00000406533 PDS5BQ9NTI5 1447 aa11.05□□□□□ -0.64
KCNMA1-212ENST00000406533 PPM1GO15355 546 aaPredicted RBP11.05□□□□□ -0.64
KCNMA1-212ENST00000406533 CSRNP3Q8WYN3 585 aa11.05□□□□□ -0.64
KCNMA1-212ENST00000406533 NPM1P06748 294 aaKnown RBP eCLIP11.04□□□□□ -0.64
KCNMA1-212ENST00000406533 POLR3GLQ9BT43 218 aa11.03□□□□□ -0.64
KCNMA1-212ENST00000406533 DDRGK1Q96HY6 314 aa10.99□□□□□ -0.65
KCNMA1-212ENST00000406533 UPF2Q9HAU5 1272 aaKnown RBP10.98□□□□□ -0.65
KCNMA1-212ENST00000406533 HSP90AA1P07900 732 aaKnown RBP10.98□□□□□ -0.65
KCNMA1-212ENST00000406533 CHMP7Q8WUX9 453 aaPredicted RBP10.97□□□□□ -0.65
KCNMA1-212ENST00000406533 NOP58Q9Y2X3 529 aaKnown RBP10.95□□□□□ -0.66
KCNMA1-212ENST00000406533 RSF1Q96T23 1441 aaPredicted RBP10.95□□□□□ -0.66
KCNMA1-212ENST00000406533 PODXL2Q9NZ53 605 aa10.95□□□□□ -0.66
KCNMA1-212ENST00000406533 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.94□□□□□ -0.66
KCNMA1-212ENST00000406533 CCDC136Q96JN2 1154 aa10.93□□□□□ -0.66
KCNMA1-212ENST00000406533 CNGB1Q14028 1251 aaPredicted RBP10.92□□□□□ -0.66
KCNMA1-212ENST00000406533 PKNOX2Q96KN3 472 aa10.92□□□□□ -0.66
KCNMA1-212ENST00000406533 ZNF326Q5BKZ1 582 aaKnown RBP10.91□□□□□ -0.66
KCNMA1-212ENST00000406533 VSIG10Q8N0Z9 540 aa10.91□□□□□ -0.66
KCNMA1-212ENST00000406533 ITGAEP38570 1179 aa10.91□□□□□ -0.66
KCNMA1-212ENST00000406533 RSPH6AQ9H0K4 717 aa10.91□□□□□ -0.66
KCNMA1-212ENST00000406533 ARXQ96QS3 562 aa10.91□□□□□ -0.66
KCNMA1-212ENST00000406533 EIF4G1Q04637 1599 aaKnown RBP10.88□□□□□ -0.67
KCNMA1-212ENST00000406533 ATAD2BQ9ULI0 1458 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms