RNA–Protein interactions for RNA: ENST00000404816.6

LTBP1-203, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene LTBP1, Length 6,333 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-203ENST00000404816 COL7A1Q02388 2944 aa7.87□□□□□ -1.15
LTBP1-203ENST00000404816 ZNF469Q96JG9 3925 aaPredicted RBP7.87□□□□□ -1.15
LTBP1-203ENST00000404816 KRTAP12-3P60328 96 aa7.86□□□□□ -1.15
LTBP1-203ENST00000404816 KRTAP4-5Q9BYR2 181 aa7.81□□□□□ -1.16
LTBP1-203ENST00000404816 DNAH9Q9NYC9 4486 aa7.8□□□□□ -1.16
LTBP1-203ENST00000404816 DNAH1Q9P2D7 4330 aa7.69□□□□□ -1.18
LTBP1-203ENST00000404816 KRTAP8-1Q8IUC2 63 aa7.66□□□□□ -1.18
LTBP1-203ENST00000404816 DNAH10Q8IVF4 4471 aa7.57□□□□□ -1.2
LTBP1-203ENST00000404816 PLECQ15149 4684 aaKnown RBP7.56□□□□□ -1.2
LTBP1-203ENST00000404816 KRTAP23-1A1A580 65 aa7.52□□□□□ -1.21
LTBP1-203ENST00000404816 DNAH5Q8TE73 4624 aa7.51□□□□□ -1.21
LTBP1-203ENST00000404816 DNAH17Q9UFH2 4485 aa7.43□□□□□ -1.22
LTBP1-203ENST00000404816 DNAH3Q8TD57 4116 aa7.42□□□□□ -1.22
LTBP1-203ENST00000404816 VPS13DQ5THJ4 4388 aa7.41□□□□□ -1.22
LTBP1-203ENST00000404816 DNAH11Q96DT5 4516 aa7.41□□□□□ -1.22
LTBP1-203ENST00000404816 DNAH2Q9P225 4427 aa7.38□□□□□ -1.23
LTBP1-203ENST00000404816 STARD9Q9P2P6 4700 aa7.24□□□□□ -1.25
LTBP1-203ENST00000404816 KRTAP4-1Q9BYQ7 146 aa7.23□□□□□ -1.25
LTBP1-203ENST00000404816 ANK2Q01484 3957 aa7.22□□□□□ -1.25
LTBP1-203ENST00000404816 DNAH8Q96JB1 4490 aa7.21□□□□□ -1.26
LTBP1-203ENST00000404816 LRP1BQ9NZR2 4599 aa7.18□□□□□ -1.26
LTBP1-203ENST00000404816 KRTAP10-7P60409 375 aaPredicted RBP7.16□□□□□ -1.26
LTBP1-203ENST00000404816 SPRR2FQ96RM1 72 aa7.15□□□□□ -1.26
LTBP1-203ENST00000404816 DYNC2H1Q8NCM8 4307 aaKnown RBP7.15□□□□□ -1.26
LTBP1-203ENST00000404816 FAT2Q9NYQ8 4349 aa7.14□□□□□ -1.27
LTBP1-203ENST00000404816 DYNC1H1Q14204 4646 aaKnown RBP7.13□□□□□ -1.27
LTBP1-203ENST00000404816 KMT2AQ03164 3969 aa7.11□□□□□ -1.27
LTBP1-203ENST00000404816 SACSQ9NZJ4 4579 aa7.1□□□□□ -1.27
LTBP1-203ENST00000404816 FRAS1Q86XX4 4008 aa7.07□□□□□ -1.28
LTBP1-203ENST00000404816 CMYA5Q8N3K9 4069 aa7.06□□□□□ -1.28
LTBP1-203ENST00000404816 FAT1Q14517 4588 aa7.06□□□□□ -1.28
LTBP1-203ENST00000404816 VPS13BQ7Z7G8 4022 aa7.03□□□□□ -1.28
LTBP1-203ENST00000404816 MT1HP80294 61 aa7.02□□□□□ -1.29
LTBP1-203ENST00000404816 KRTAP19-5Q3LI72 72 aa6.99□□□□□ -1.29
LTBP1-203ENST00000404816 PRKDCP78527 4128 aaKnown RBP6.99□□□□□ -1.29
LTBP1-203ENST00000404816 DNHD1Q96M86 4753 aa6.98□□□□□ -1.29
LTBP1-203ENST00000404816 MT2AP02795 61 aa6.9□□□□□ -1.3
LTBP1-203ENST00000404816 LCE3CQ5T5A8 94 aa6.89□□□□□ -1.31
LTBP1-203ENST00000404816 SPRR2GQ9BYE4 73 aa6.87□□□□□ -1.31
LTBP1-203ENST00000404816 DNAH7Q8WXX0 4024 aa6.86□□□□□ -1.31
LTBP1-203ENST00000404816 DNAH6Q9C0G6 4158 aa6.86□□□□□ -1.31
LTBP1-203ENST00000404816 LYSTQ99698 3801 aa6.85□□□□□ -1.31
LTBP1-203ENST00000404816 APOBP04114 4563 aaKnown RBP6.84□□□□□ -1.31
LTBP1-203ENST00000404816 SPRR2EP22531 72 aa6.81□□□□□ -1.32
LTBP1-203ENST00000404816 SPRR2BP35325 72 aa6.81□□□□□ -1.32
LTBP1-203ENST00000404816 SPRR2AP35326 72 aa6.81□□□□□ -1.32
LTBP1-203ENST00000404816 HECTD4Q9Y4D8 3996 aa6.81□□□□□ -1.32
LTBP1-203ENST00000404816 MT1FP04733 61 aa6.8□□□□□ -1.32
LTBP1-203ENST00000404816 RYR1P21817 5038 aa6.77□□□□□ -1.33
LTBP1-203ENST00000404816 LCE3BQ5TA77 95 aa6.67□□□□□ -1.34
LTBP1-203ENST00000404816 KRTAP17-1Q9BYP8 105 aa6.64□□□□□ -1.35
LTBP1-203ENST00000404816 SPRR2DP22532 72 aa6.6□□□□□ -1.35
LTBP1-203ENST00000404816 FAT3Q8TDW7 4589 aa6.57□□□□□ -1.36
LTBP1-203ENST00000404816 MYCBP2O75592 4640 aa6.55□□□□□ -1.36
LTBP1-203ENST00000404816 RYR3Q15413 4870 aa6.52□□□□□ -1.37
LTBP1-203ENST00000404816 KRTAP12-4P60329 112 aa6.51□□□□□ -1.37
LTBP1-203ENST00000404816 LRP1Q07954 4544 aaKnown RBP6.5□□□□□ -1.37
LTBP1-203ENST00000404816 MT1GP13640 62 aa6.43□□□□□ -1.38
LTBP1-203ENST00000404816 KRTAP19-1Q8IUB9 90 aa6.43□□□□□ -1.38
LTBP1-203ENST00000404816 LCE2BO14633 110 aa6.42□□□□□ -1.38
LTBP1-203ENST00000404816 KRTAP19-8Q3LI54 63 aa6.35□□□□□ -1.39
LTBP1-203ENST00000404816 HSPG2P98160 4391 aa6.35□□□□□ -1.39
LTBP1-203ENST00000404816 HYDINQ4G0P3 5121 aa6.35□□□□□ -1.39
LTBP1-203ENST00000404816 MT1XP80297 61 aa6.31□□□□□ -1.4
LTBP1-203ENST00000404816 RYR2Q92736 4967 aa6.3□□□□□ -1.4
LTBP1-203ENST00000404816 SPRR5A0A1B0GTR4 108 aa6.27□□□□□ -1.41
LTBP1-203ENST00000404816 PKHD1P08F94 4074 aa6.27□□□□□ -1.41
LTBP1-203ENST00000404816 KRTAP4-8A0A0G2JLE6 195 aa6.26□□□□□ -1.41
LTBP1-203ENST00000404816 KRTAP4-8Q9BYQ9 185 aa6.26□□□□□ -1.41
LTBP1-203ENST00000404816 KIAA1109Q2LD37 5005 aa6.24□□□□□ -1.41
LTBP1-203ENST00000404816 LPAP08519 4548 aa6.23□□□□□ -1.41
LTBP1-203ENST00000404816 MT1BP07438 61 aa6.21□□□□□ -1.41
LTBP1-203ENST00000404816 PKD1P98161 4303 aa6.21□□□□□ -1.42
LTBP1-203ENST00000404816 KRTAP9-8Q9BYQ0 159 aa6.19□□□□□ -1.42
LTBP1-203ENST00000404816 PKHD1L1Q86WI1 4243 aa6.15□□□□□ -1.42
LTBP1-203ENST00000404816 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
LTBP1-203ENST00000404816 TNXBP22105 4242 aa6.15□□□□□ -1.43
LTBP1-203ENST00000404816 LCE2CQ5TA81 110 aa6.14□□□□□ -1.43
LTBP1-203ENST00000404816 LCE3DQ9BYE3 92 aa6.14□□□□□ -1.43
LTBP1-203ENST00000404816 LRP2P98164 4655 aa6.13□□□□□ -1.43
LTBP1-203ENST00000404816 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
LTBP1-203ENST00000404816 LCE2DQ5TA82 110 aaPredicted RBP6.1□□□□□ -1.43
LTBP1-203ENST00000404816 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
LTBP1-203ENST00000404816 LCE3EQ5T5B0 92 aa6□□□□□ -1.45
LTBP1-203ENST00000404816 HERC1Q15751 4861 aa5.97□□□□□ -1.45
LTBP1-203ENST00000404816 HERC2O95714 4834 aa5.96□□□□□ -1.46
LTBP1-203ENST00000404816 MT4P47944 62 aa5.95□□□□□ -1.46
LTBP1-203ENST00000404816 KMT2CQ8NEZ4 4911 aaKnown RBP5.93□□□□□ -1.46
LTBP1-203ENST00000404816 PRM1P04553 51 aa5.86□□□□□ -1.47
LTBP1-203ENST00000404816 KRTAP19-2Q3LHN2 52 aa5.84□□□□□ -1.47
LTBP1-203ENST00000404816 LCE1BQ5T7P3 118 aa5.83□□□□□ -1.48
LTBP1-203ENST00000404816 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
LTBP1-203ENST00000404816 BIRC6Q9NR09 4857 aa5.79□□□□□ -1.48
LTBP1-203ENST00000404816 FLGP20930 4061 aaPredicted RBP5.79□□□□□ -1.48
LTBP1-203ENST00000404816 MUC17Q685J3 4493 aa5.75□□□□□ -1.49
LTBP1-203ENST00000404816 MT1LQ93083 61 aa5.73□□□□□ -1.49
LTBP1-203ENST00000404816 LCE1DQ5T752 114 aa5.72□□□□□ -1.49
LTBP1-203ENST00000404816 KRTAP19-3Q7Z4W3 81 aa5.69□□□□□ -1.5
LTBP1-203ENST00000404816 PCLOQ9Y6V0 5065 aa5.68□□□□□ -1.5
LTBP1-203ENST00000404816 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms