RNA–Protein interactions for RNA: ENST00000399598.6

UBXN2B-201, Transcript of UBX domain protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2B, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-201ENST00000399598 CSMD3Q7Z407 3707 aa6.54□□□□□ -1.36
UBXN2B-201ENST00000399598 HUWE1Q7Z6Z7 4374 aaKnown RBP6.53□□□□□ -1.36
UBXN2B-201ENST00000399598 CMYA5Q8N3K9 4069 aa6.53□□□□□ -1.36
UBXN2B-201ENST00000399598 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
UBXN2B-201ENST00000399598 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
UBXN2B-201ENST00000399598 DNAH1Q9P2D7 4330 aa6.38□□□□□ -1.39
UBXN2B-201ENST00000399598 DNAH3Q8TD57 4116 aa6.36□□□□□ -1.39
UBXN2B-201ENST00000399598 DNAH5Q8TE73 4624 aa6.36□□□□□ -1.39
UBXN2B-201ENST00000399598 LYSTQ99698 3801 aa6.31□□□□□ -1.4
UBXN2B-201ENST00000399598 PLECQ15149 4684 aaKnown RBP6.27□□□□□ -1.41
UBXN2B-201ENST00000399598 FAT1Q14517 4588 aa6.22□□□□□ -1.41
UBXN2B-201ENST00000399598 KRTAP4-1Q9BYQ7 146 aa6.2□□□□□ -1.42
UBXN2B-201ENST00000399598 DNAH9Q9NYC9 4486 aa6.18□□□□□ -1.42
UBXN2B-201ENST00000399598 DNAH11Q96DT5 4516 aa6.17□□□□□ -1.42
UBXN2B-201ENST00000399598 KRTAP10-5P60370 271 aa6.16□□□□□ -1.42
UBXN2B-201ENST00000399598 DNAH7Q8WXX0 4024 aa6.16□□□□□ -1.42
UBXN2B-201ENST00000399598 DNAH10Q8IVF4 4471 aa6.16□□□□□ -1.42
UBXN2B-201ENST00000399598 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
UBXN2B-201ENST00000399598 DNHD1Q96M86 4753 aa6.12□□□□□ -1.43
UBXN2B-201ENST00000399598 ALMS1Q8TCU4 4167 aa6.12□□□□□ -1.43
UBXN2B-201ENST00000399598 DYNC2H1Q8NCM8 4307 aaKnown RBP6.06□□□□□ -1.44
UBXN2B-201ENST00000399598 DNAH8Q96JB1 4490 aa6.05□□□□□ -1.44
UBXN2B-201ENST00000399598 MT1HP80294 61 aa6.03□□□□□ -1.44
UBXN2B-201ENST00000399598 MT2AP02795 61 aa6.01□□□□□ -1.45
UBXN2B-201ENST00000399598 RYR1P21817 5038 aa6□□□□□ -1.45
UBXN2B-201ENST00000399598 SPRR2GQ9BYE4 73 aa5.97□□□□□ -1.45
UBXN2B-201ENST00000399598 DYNC1H1Q14204 4646 aaKnown RBP5.96□□□□□ -1.45
UBXN2B-201ENST00000399598 PRKDCP78527 4128 aaKnown RBP5.93□□□□□ -1.46
UBXN2B-201ENST00000399598 DNAH2Q9P225 4427 aa5.92□□□□□ -1.46
UBXN2B-201ENST00000399598 FRAS1Q86XX4 4008 aa5.91□□□□□ -1.46
UBXN2B-201ENST00000399598 LRP1BQ9NZR2 4599 aa5.9□□□□□ -1.47
UBXN2B-201ENST00000399598 MT1FP04733 61 aa5.89□□□□□ -1.47
UBXN2B-201ENST00000399598 HECTD4Q9Y4D8 3996 aa5.89□□□□□ -1.47
UBXN2B-201ENST00000399598 DNAH17Q9UFH2 4485 aa5.89□□□□□ -1.47
UBXN2B-201ENST00000399598 SACSQ9NZJ4 4579 aa5.88□□□□□ -1.47
UBXN2B-201ENST00000399598 VPS13DQ5THJ4 4388 aa5.87□□□□□ -1.47
UBXN2B-201ENST00000399598 STARD9Q9P2P6 4700 aa5.86□□□□□ -1.47
UBXN2B-201ENST00000399598 KMT2AQ03164 3969 aa5.83□□□□□ -1.48
UBXN2B-201ENST00000399598 KRTAP19-5Q3LI72 72 aa5.81□□□□□ -1.48
UBXN2B-201ENST00000399598 MYCBP2O75592 4640 aa5.77□□□□□ -1.49
UBXN2B-201ENST00000399598 APOBP04114 4563 aaKnown RBP5.75□□□□□ -1.49
UBXN2B-201ENST00000399598 DNAH6Q9C0G6 4158 aa5.73□□□□□ -1.49
UBXN2B-201ENST00000399598 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
UBXN2B-201ENST00000399598 SPRR2FQ96RM1 72 aa5.72□□□□□ -1.49
UBXN2B-201ENST00000399598 KIAA1109Q2LD37 5005 aa5.67□□□□□ -1.5
UBXN2B-201ENST00000399598 FAT2Q9NYQ8 4349 aa5.66□□□□□ -1.5
UBXN2B-201ENST00000399598 KRTAP10-7P60409 375 aaPredicted RBP5.66□□□□□ -1.5
UBXN2B-201ENST00000399598 VPS13BQ7Z7G8 4022 aa5.65□□□□□ -1.5
UBXN2B-201ENST00000399598 PKD1P98161 4303 aa5.64□□□□□ -1.51
UBXN2B-201ENST00000399598 HYDINQ4G0P3 5121 aa5.61□□□□□ -1.51
UBXN2B-201ENST00000399598 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
UBXN2B-201ENST00000399598 RYR3Q15413 4870 aa5.57□□□□□ -1.52
UBXN2B-201ENST00000399598 KRTAP17-1Q9BYP8 105 aa5.52□□□□□ -1.53
UBXN2B-201ENST00000399598 FAT3Q8TDW7 4589 aa5.52□□□□□ -1.53
UBXN2B-201ENST00000399598 KRTAP19-8Q3LI54 63 aa5.51□□□□□ -1.53
UBXN2B-201ENST00000399598 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.53
UBXN2B-201ENST00000399598 LRP1Q07954 4544 aaKnown RBP5.46□□□□□ -1.54
UBXN2B-201ENST00000399598 MT1XP80297 61 aa5.43□□□□□ -1.54
UBXN2B-201ENST00000399598 PKHD1P08F94 4074 aa5.43□□□□□ -1.54
UBXN2B-201ENST00000399598 MT1BP07438 61 aa5.37□□□□□ -1.55
UBXN2B-201ENST00000399598 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
UBXN2B-201ENST00000399598 PKHD1L1Q86WI1 4243 aa5.32□□□□□ -1.56
UBXN2B-201ENST00000399598 RYR2Q92736 4967 aa5.32□□□□□ -1.56
UBXN2B-201ENST00000399598 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
UBXN2B-201ENST00000399598 LRP2P98164 4655 aa5.3□□□□□ -1.56
UBXN2B-201ENST00000399598 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
UBXN2B-201ENST00000399598 MT1GP13640 62 aa5.3□□□□□ -1.56
UBXN2B-201ENST00000399598 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
UBXN2B-201ENST00000399598 KRTAP12-4P60329 112 aa5.28□□□□□ -1.56
UBXN2B-201ENST00000399598 HERC2O95714 4834 aa5.27□□□□□ -1.57
UBXN2B-201ENST00000399598 SPRR2EP22531 72 aa5.27□□□□□ -1.57
UBXN2B-201ENST00000399598 SPRR2BP35325 72 aa5.27□□□□□ -1.57
UBXN2B-201ENST00000399598 SPRR2AP35326 72 aa5.27□□□□□ -1.57
UBXN2B-201ENST00000399598 SPRR5A0A1B0GTR4 108 aa5.22□□□□□ -1.57
UBXN2B-201ENST00000399598 PCLOQ9Y6V0 5065 aa5.22□□□□□ -1.57
UBXN2B-201ENST00000399598 LCE2CQ5TA81 110 aa5.2□□□□□ -1.58
UBXN2B-201ENST00000399598 SYNE1Q8NF91 8797 aaKnown RBP5.2□□□□□ -1.58
UBXN2B-201ENST00000399598 KRTAP9-3Q9BYQ3 159 aa5.17□□□□□ -1.58
UBXN2B-201ENST00000399598 TNXBP22105 4242 aa5.12□□□□□ -1.59
UBXN2B-201ENST00000399598 KMT2CQ8NEZ4 4911 aaKnown RBP5.11□□□□□ -1.59
UBXN2B-201ENST00000399598 LCE2BO14633 110 aa5.09□□□□□ -1.59
UBXN2B-201ENST00000399598 SPRR2DP22532 72 aa5.08□□□□□ -1.6
UBXN2B-201ENST00000399598 EPPK1P58107 5090 aaKnown RBP5.08□□□□□ -1.6
UBXN2B-201ENST00000399598 HSPG2P98160 4391 aa5.06□□□□□ -1.6
UBXN2B-201ENST00000399598 LCE3DQ9BYE3 92 aa5.05□□□□□ -1.6
UBXN2B-201ENST00000399598 KRTAP4-7Q9BYR0 210 aa5.04□□□□□ -1.6
UBXN2B-201ENST00000399598 HERC1Q15751 4861 aa5.02□□□□□ -1.61
UBXN2B-201ENST00000399598 BIRC6Q9NR09 4857 aa4.97□□□□□ -1.61
UBXN2B-201ENST00000399598 LCE3EQ5T5B0 92 aa4.97□□□□□ -1.61
UBXN2B-201ENST00000399598 LPAP08519 4548 aa4.95□□□□□ -1.62
UBXN2B-201ENST00000399598 KRTAP19-3Q7Z4W3 81 aa4.95□□□□□ -1.62
UBXN2B-201ENST00000399598 MT1LQ93083 61 aa4.94□□□□□ -1.62
UBXN2B-201ENST00000399598 KRTAP19-2Q3LHN2 52 aa4.94□□□□□ -1.62
UBXN2B-201ENST00000399598 MT1EP04732 61 aa4.89□□□□□ -1.63
UBXN2B-201ENST00000399598 MUC17Q685J3 4493 aa4.86□□□□□ -1.63
UBXN2B-201ENST00000399598 ABCA13Q86UQ4 5058 aa4.85□□□□□ -1.63
UBXN2B-201ENST00000399598 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
UBXN2B-201ENST00000399598 UBR4Q5T4S7 5183 aa4.8□□□□□ -1.64
UBXN2B-201ENST00000399598 MT1MQ8N339 61 aa4.74□□□□□ -1.65
UBXN2B-201ENST00000399598 FLGP20930 4061 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms