RNA–Protein interactions for RNA: ENST00000399598.6

UBXN2B-201, Transcript of UBX domain protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2B, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-201ENST00000399598 DCAF8L2P0C7V8 631 aa26.28■■□□□ 1.8
UBXN2B-201ENST00000399598 SUPT5HO00267 1087 aaKnown RBP25.18■■□□□ 1.62
UBXN2B-201ENST00000399598 SHROOM4Q9ULL8 1493 aa24.6■■□□□ 1.53
UBXN2B-201ENST00000399598 NISCHQ9Y2I1 1504 aa24.6■■□□□ 1.53
UBXN2B-201ENST00000399598 EHMT2Q96KQ7 1210 aa24.46■■□□□ 1.51
UBXN2B-201ENST00000399598 PELP1Q8IZL8 1130 aaKnown RBP23.92■■□□□ 1.42
UBXN2B-201ENST00000399598 APLP2Q06481 763 aa23.81■■□□□ 1.4
UBXN2B-201ENST00000399598 FAM9AQ8IZU1 332 aaPredicted RBP23.79■■□□□ 1.4
UBXN2B-201ENST00000399598 PCGF6Q9BYE7 350 aa23.73■■□□□ 1.39
UBXN2B-201ENST00000399598 TTBK1Q5TCY1 1321 aaPredicted RBP23.66■■□□□ 1.38
UBXN2B-201ENST00000399598 RANGAP1P46060 587 aaPredicted RBP23.29■■□□□ 1.32
UBXN2B-201ENST00000399598 CENPBP07199 599 aaPredicted RBP23.23■■□□□ 1.31
UBXN2B-201ENST00000399598 CCER1Q8TC90 406 aaPredicted RBP23.21■■□□□ 1.31
UBXN2B-201ENST00000399598 TRIM41Q8WV44 630 aa23.21■■□□□ 1.31
UBXN2B-201ENST00000399598 ZEB1P37275 1124 aaPredicted RBP23.16■■□□□ 1.3
UBXN2B-201ENST00000399598 ERICH6Q7L0X2 663 aa23■■□□□ 1.27
UBXN2B-201ENST00000399598 ATP1B4Q9UN42 357 aaPredicted RBP22.99■■□□□ 1.27
UBXN2B-201ENST00000399598 UBTFP17480 764 aaKnown RBP22.96■■□□□ 1.27
UBXN2B-201ENST00000399598 YTHDC1Q96MU7 727 aaKnown RBP22.85■■□□□ 1.25
UBXN2B-201ENST00000399598 PPARGC1BQ86YN6 1023 aaKnown RBP22.8■■□□□ 1.24
UBXN2B-201ENST00000399598 NEFLP07196 543 aa22.7■■□□□ 1.22
UBXN2B-201ENST00000399598 TRIM26Q12899 539 aaPredicted RBP22.57■■□□□ 1.2
UBXN2B-201ENST00000399598 HRCP23327 699 aa22.46■■□□□ 1.19
UBXN2B-201ENST00000399598 LOC105371045A0A1W2PR82 267 aa22.4■■□□□ 1.18
UBXN2B-201ENST00000399598 ITGAEP38570 1179 aa22.35■■□□□ 1.17
UBXN2B-201ENST00000399598 MYT1Q01538 1121 aa22.32■■□□□ 1.16
UBXN2B-201ENST00000399598 CHIC1Q5VXU3 224 aa22.28■■□□□ 1.16
UBXN2B-201ENST00000399598 HNRNPUL2Q1KMD3 747 aaKnown RBP22.22■■□□□ 1.15
UBXN2B-201ENST00000399598 POLR3GLQ9BT43 218 aa22.18■■□□□ 1.14
UBXN2B-201ENST00000399598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.1■■□□□ 1.13
UBXN2B-201ENST00000399598 CNGB1Q14028 1251 aaPredicted RBP22.07■■□□□ 1.12
UBXN2B-201ENST00000399598 DAXXQ9UER7 740 aaPredicted RBP22■■□□□ 1.11
UBXN2B-201ENST00000399598 MYT1LQ9UL68 1186 aa21.98■■□□□ 1.11
UBXN2B-201ENST00000399598 DIEXFQ68CQ4 756 aaKnown RBP21.9■■□□□ 1.1
UBXN2B-201ENST00000399598 FAM50AQ14320 339 aaKnown RBP21.67■■□□□ 1.06
UBXN2B-201ENST00000399598 SLC4A1APQ9BWU0 796 aaKnown RBP21.64■■□□□ 1.06
UBXN2B-201ENST00000399598 NEUROD1Q13562 356 aa21.58■■□□□ 1.05
UBXN2B-201ENST00000399598 CLSPNQ9HAW4 1339 aa21.58■■□□□ 1.04
UBXN2B-201ENST00000399598 RTL5Q5HYW3 569 aaPredicted RBP21.57■■□□□ 1.04
UBXN2B-201ENST00000399598 TRIM52Q96A61 297 aa21.55■■□□□ 1.04
UBXN2B-201ENST00000399598 BCANQ96GW7 911 aa21.54■■□□□ 1.04
UBXN2B-201ENST00000399598 GTF3C3Q9Y5Q9 886 aa21.54■■□□□ 1.04
UBXN2B-201ENST00000399598 ZNF316A6NFI3 1004 aaPredicted RBP21.5■■□□□ 1.03
UBXN2B-201ENST00000399598 PABPN1Q86U42 306 aaKnown RBP eCLIP21.43■■□□□ 1.02
UBXN2B-201ENST00000399598 ZNF326Q5BKZ1 582 aaKnown RBP21.38■■□□□ 1.01
UBXN2B-201ENST00000399598 ANP32CO43423 234 aa21.36■■□□□ 1.01
UBXN2B-201ENST00000399598 CDK11AQ9UQ88 783 aaPredicted RBP21.25■□□□□ 0.99
UBXN2B-201ENST00000399598 ABCC9O60706 1549 aa21.23■□□□□ 0.99
UBXN2B-201ENST00000399598 ACIN1Q9UKV3 1341 aaKnown RBP21.18■□□□□ 0.98
UBXN2B-201ENST00000399598 P3H3Q8IVL6 736 aa21.13■□□□□ 0.97
UBXN2B-201ENST00000399598 CSRNP3Q8WYN3 585 aa21.11■□□□□ 0.97
UBXN2B-201ENST00000399598 FBLN2P98095 1184 aa21.11■□□□□ 0.97
UBXN2B-201ENST00000399598 ARID3CA6NKF2 412 aa21.08■□□□□ 0.97
UBXN2B-201ENST00000399598 BCL11AQ9H165 835 aa21.05■□□□□ 0.96
UBXN2B-201ENST00000399598 ZBTB47Q9UFB7 747 aaPredicted RBP21.03■□□□□ 0.96
UBXN2B-201ENST00000399598 CANXP27824 592 aaKnown RBP21.01■□□□□ 0.95
UBXN2B-201ENST00000399598 ZNF777Q9ULD5 760 aaPredicted RBP20.91■□□□□ 0.94
UBXN2B-201ENST00000399598 SLC24A1O60721 1099 aa20.9■□□□□ 0.94
UBXN2B-201ENST00000399598 ANP32AP39687 249 aaKnown RBP20.89■□□□□ 0.94
UBXN2B-201ENST00000399598 FKBP8Q14318 412 aa20.87■□□□□ 0.93
UBXN2B-201ENST00000399598 NPM2Q86SE8 214 aaKnown RBP20.87■□□□□ 0.93
UBXN2B-201ENST00000399598 NEFMP07197 916 aa20.83■□□□□ 0.93
UBXN2B-201ENST00000399598 DDX10Q13206 875 aaKnown RBP20.81■□□□□ 0.92
UBXN2B-201ENST00000399598 HNRNPUQ00839 825 aaKnown RBP eCLIP20.79■□□□□ 0.92
UBXN2B-201ENST00000399598 TONSLQ96HA7 1378 aa20.77■□□□□ 0.92
UBXN2B-201ENST00000399598 FAM9BQ8IZU0 186 aa20.73■□□□□ 0.91
UBXN2B-201ENST00000399598 SALL2Q9Y467 1007 aaPredicted RBP20.68■□□□□ 0.9
UBXN2B-201ENST00000399598 DCAF1Q9Y4B6 1507 aa20.64■□□□□ 0.9
UBXN2B-201ENST00000399598 CHIC2Q9UKJ5 165 aa20.61■□□□□ 0.89
UBXN2B-201ENST00000399598 CHGAP10645 457 aaKnown RBP20.6■□□□□ 0.89
UBXN2B-201ENST00000399598 EIF5BO60841 1220 aaKnown RBP20.57■□□□□ 0.88
UBXN2B-201ENST00000399598 HSP90AA1P07900 732 aaKnown RBP20.56■□□□□ 0.88
UBXN2B-201ENST00000399598 TMC1Q8TDI8 760 aa20.55■□□□□ 0.88
UBXN2B-201ENST00000399598 MIER1Q8N108 512 aa20.55■□□□□ 0.88
UBXN2B-201ENST00000399598 CCDC136Q96JN2 1154 aa20.55■□□□□ 0.88
UBXN2B-201ENST00000399598 HIRIP3Q9BW71 556 aaPredicted RBP20.51■□□□□ 0.87
UBXN2B-201ENST00000399598 SCAF1Q9H7N4 1312 aaKnown RBP20.51■□□□□ 0.87
UBXN2B-201ENST00000399598 UPF2Q9HAU5 1272 aaKnown RBP20.51■□□□□ 0.87
UBXN2B-201ENST00000399598 MRS2Q9HD23 443 aa20.5■□□□□ 0.87
UBXN2B-201ENST00000399598 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
UBXN2B-201ENST00000399598 NBR1Q14596 966 aa20.47■□□□□ 0.87
UBXN2B-201ENST00000399598 ANP32BQ92688 251 aaKnown RBP20.47■□□□□ 0.87
UBXN2B-201ENST00000399598 IRX6P78412 446 aaPredicted RBP20.47■□□□□ 0.87
UBXN2B-201ENST00000399598 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.46■□□□□ 0.87
UBXN2B-201ENST00000399598 STAG3Q9UJ98 1225 aa20.45■□□□□ 0.86
UBXN2B-201ENST00000399598 KDM2AQ9Y2K7 1162 aa20.44■□□□□ 0.86
UBXN2B-201ENST00000399598 ESF1Q9H501 851 aaKnown RBP20.44■□□□□ 0.86
UBXN2B-201ENST00000399598 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.39■□□□□ 0.86
UBXN2B-201ENST00000399598 WDR43Q15061 677 aaKnown RBP eCLIP20.37■□□□□ 0.85
UBXN2B-201ENST00000399598 ARXQ96QS3 562 aa20.35■□□□□ 0.85
UBXN2B-201ENST00000399598 TSPY4P0CV99 314 aa20.35■□□□□ 0.85
UBXN2B-201ENST00000399598 TSPY10P0CW01 314 aa20.35■□□□□ 0.85
UBXN2B-201ENST00000399598 MTUS2Q5JR59 1369 aa20.34■□□□□ 0.85
UBXN2B-201ENST00000399598 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
UBXN2B-201ENST00000399598 ZCCHC6Q5VYS8 1495 aaKnown RBP20.32■□□□□ 0.84
UBXN2B-201ENST00000399598 CLIP1P30622 1438 aa20.31■□□□□ 0.84
UBXN2B-201ENST00000399598 EIF4G2P78344 907 aaKnown RBP eCLIP20.29■□□□□ 0.84
UBXN2B-201ENST00000399598 RRP7BPQ9NSQ0 103 aa20.28■□□□□ 0.84
UBXN2B-201ENST00000399598 NPM1P06748 294 aaKnown RBP eCLIP20.28■□□□□ 0.84
UBXN2B-201ENST00000399598 SENP3-EIF4A1A0A087X0R7 540 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms