RNA–Protein interactions for RNA: ENST00000398896.5

USP19-204, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP19, Length 3,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-204ENST00000398896 DNHD1Q96M86 4753 aa5.13□□□□□ -1.59
USP19-204ENST00000398896 DNAH7Q8WXX0 4024 aa5.1□□□□□ -1.59
USP19-204ENST00000398896 PRO2289Q9P1D8 64 aa5.1□□□□□ -1.59
USP19-204ENST00000398896 DNAH2Q9P225 4427 aa5.07□□□□□ -1.6
USP19-204ENST00000398896 DNAH11Q96DT5 4516 aa5.06□□□□□ -1.6
USP19-204ENST00000398896 PRKDCP78527 4128 aaKnown RBP5.05□□□□□ -1.6
USP19-204ENST00000398896 HECTD4Q9Y4D8 3996 aa5.03□□□□□ -1.6
USP19-204ENST00000398896 TNP1P09430 55 aa5.03□□□□□ -1.6
USP19-204ENST00000398896 KRTAP21-3Q3LHN1 58 aa5.03□□□□□ -1.6
USP19-204ENST00000398896 LRP1BQ9NZR2 4599 aa5.01□□□□□ -1.61
USP19-204ENST00000398896 VPS13DQ5THJ4 4388 aa5□□□□□ -1.61
USP19-204ENST00000398896 DNAH6Q9C0G6 4158 aa4.97□□□□□ -1.61
USP19-204ENST00000398896 KMT2AQ03164 3969 aa4.92□□□□□ -1.62
USP19-204ENST00000398896 INE1O15225 51 aa4.91□□□□□ -1.62
USP19-204ENST00000398896 Q5VSD8 79 aa4.9□□□□□ -1.63
USP19-204ENST00000398896 STARD9Q9P2P6 4700 aa4.89□□□□□ -1.63
USP19-204ENST00000398896 VPS13BQ7Z7G8 4022 aa4.86□□□□□ -1.63
USP19-204ENST00000398896 DNAH5Q8TE73 4624 aa4.8□□□□□ -1.64
USP19-204ENST00000398896 PKHD1P08F94 4074 aa4.79□□□□□ -1.64
USP19-204ENST00000398896 KRTAP10-4P60372 401 aaPredicted RBP4.79□□□□□ -1.64
USP19-204ENST00000398896 LORP23490 312 aaPredicted RBP4.77□□□□□ -1.65
USP19-204ENST00000398896 APOBP04114 4563 aaKnown RBP4.74□□□□□ -1.65
USP19-204ENST00000398896 PKD1P98161 4303 aa4.72□□□□□ -1.65
USP19-204ENST00000398896 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
USP19-204ENST00000398896 SACSQ9NZJ4 4579 aa4.72□□□□□ -1.65
USP19-204ENST00000398896 FAT1Q14517 4588 aa4.7□□□□□ -1.66
USP19-204ENST00000398896 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
USP19-204ENST00000398896 A0A1B0GVY2 172 aa4.68□□□□□ -1.66
USP19-204ENST00000398896 M0R2T5 61 aa4.67□□□□□ -1.66
USP19-204ENST00000398896 MYCBP2O75592 4640 aa4.65□□□□□ -1.66
USP19-204ENST00000398896 PKHD1L1Q86WI1 4243 aa4.65□□□□□ -1.67
USP19-204ENST00000398896 DYNC1H1Q14204 4646 aaKnown RBP4.64□□□□□ -1.67
USP19-204ENST00000398896 HYDINQ4G0P3 5121 aa4.62□□□□□ -1.67
USP19-204ENST00000398896 KMT2CQ8NEZ4 4911 aaKnown RBP4.61□□□□□ -1.67
USP19-204ENST00000398896 FAT2Q9NYQ8 4349 aa4.6□□□□□ -1.67
USP19-204ENST00000398896 LRP1Q07954 4544 aaKnown RBP4.55□□□□□ -1.68
USP19-204ENST00000398896 HSPG2P98160 4391 aa4.54□□□□□ -1.68
USP19-204ENST00000398896 FAT3Q8TDW7 4589 aa4.54□□□□□ -1.68
USP19-204ENST00000398896 MT1HL1P0DM35 61 aa4.5□□□□□ -1.69
USP19-204ENST00000398896 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
USP19-204ENST00000398896 RYR3Q15413 4870 aa4.41□□□□□ -1.7
USP19-204ENST00000398896 LRP2P98164 4655 aa4.37□□□□□ -1.71
USP19-204ENST00000398896 TNXBP22105 4242 aa4.35□□□□□ -1.71
USP19-204ENST00000398896 KIAA1109Q2LD37 5005 aa4.34□□□□□ -1.71
USP19-204ENST00000398896 EPPK1P58107 5090 aaKnown RBP4.31□□□□□ -1.72
USP19-204ENST00000398896 KRTAP12-3P60328 96 aa4.3□□□□□ -1.72
USP19-204ENST00000398896 KRTAP4-1Q9BYQ7 146 aa4.28□□□□□ -1.72
USP19-204ENST00000398896 LPAP08519 4548 aa4.27□□□□□ -1.73
USP19-204ENST00000398896 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
USP19-204ENST00000398896 KRTAP10-10P60014 251 aa4.23□□□□□ -1.73
USP19-204ENST00000398896 KRTAP4-5Q9BYR2 181 aa4.21□□□□□ -1.74
USP19-204ENST00000398896 RYR2Q92736 4967 aa4.2□□□□□ -1.74
USP19-204ENST00000398896 KRTAP10-12P60413 245 aa4.19□□□□□ -1.74
USP19-204ENST00000398896 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
USP19-204ENST00000398896 RYR1P21817 5038 aa4.18□□□□□ -1.74
USP19-204ENST00000398896 MUC2Q02817 5179 aa4.14□□□□□ -1.75
USP19-204ENST00000398896 SPRR2GQ9BYE4 73 aa4.14□□□□□ -1.75
USP19-204ENST00000398896 KRTAP17-1Q9BYP8 105 aa4.14□□□□□ -1.75
USP19-204ENST00000398896 ABCA13Q86UQ4 5058 aa4.1□□□□□ -1.75
USP19-204ENST00000398896 HERC1Q15751 4861 aa4.07□□□□□ -1.76
USP19-204ENST00000398896 RNF213Q63HN8 5207 aa4.05□□□□□ -1.76
USP19-204ENST00000398896 KRTAP19-1Q8IUB9 90 aa4.03□□□□□ -1.76
USP19-204ENST00000398896 KRTAP19-2Q3LHN2 52 aa4.02□□□□□ -1.77
USP19-204ENST00000398896 PCLOQ9Y6V0 5065 aa4.01□□□□□ -1.77
USP19-204ENST00000398896 HERC2O95714 4834 aa3.99□□□□□ -1.77
USP19-204ENST00000398896 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
USP19-204ENST00000398896 MUC17Q685J3 4493 aa3.95□□□□□ -1.78
USP19-204ENST00000398896 FLGP20930 4061 aaPredicted RBP3.93□□□□□ -1.78
USP19-204ENST00000398896 UBR4Q5T4S7 5183 aa3.93□□□□□ -1.78
USP19-204ENST00000398896 FAT4Q6V0I7 4981 aa3.9□□□□□ -1.78
USP19-204ENST00000398896 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
USP19-204ENST00000398896 KRTAP19-5Q3LI72 72 aa3.86□□□□□ -1.79
USP19-204ENST00000398896 MT1XP80297 61 aa3.86□□□□□ -1.79
USP19-204ENST00000398896 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
USP19-204ENST00000398896 MT2AP02795 61 aa3.84□□□□□ -1.79
USP19-204ENST00000398896 MT1FP04733 61 aa3.84□□□□□ -1.79
USP19-204ENST00000398896 KRTAP19-8Q3LI54 63 aa3.83□□□□□ -1.8
USP19-204ENST00000398896 LCE2BO14633 110 aa3.8□□□□□ -1.8
USP19-204ENST00000398896 LCE2CQ5TA81 110 aa3.79□□□□□ -1.8
USP19-204ENST00000398896 MT1BP07438 61 aa3.75□□□□□ -1.81
USP19-204ENST00000398896 FSIP2Q5CZC0 6907 aa3.75□□□□□ -1.81
USP19-204ENST00000398896 MT1HP80294 61 aa3.75□□□□□ -1.81
USP19-204ENST00000398896 BIRC6Q9NR09 4857 aa3.73□□□□□ -1.81
USP19-204ENST00000398896 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
USP19-204ENST00000398896 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
USP19-204ENST00000398896 KRTAP2-1Q9BYU5 128 aa3.72□□□□□ -1.81
USP19-204ENST00000398896 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
USP19-204ENST00000398896 HMCN2Q8NDA2 5059 aa3.7□□□□□ -1.82
USP19-204ENST00000398896 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
USP19-204ENST00000398896 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
USP19-204ENST00000398896 KRTAP9-8Q9BYQ0 159 aa3.64□□□□□ -1.83
USP19-204ENST00000398896 LCE2AQ5TA79 106 aaPredicted RBP3.64□□□□□ -1.83
USP19-204ENST00000398896 CRCT1Q9UGL9 99 aa3.62□□□□□ -1.83
USP19-204ENST00000398896 KRTAP19-4Q3LI73 84 aa3.62□□□□□ -1.83
USP19-204ENST00000398896 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
USP19-204ENST00000398896 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
USP19-204ENST00000398896 USH2AO75445 5202 aa3.57□□□□□ -1.84
USP19-204ENST00000398896 KRTAP4-8A0A0G2JLE6 195 aa3.55□□□□□ -1.84
USP19-204ENST00000398896 KRTAP4-8Q9BYQ9 185 aa3.55□□□□□ -1.84
USP19-204ENST00000398896 KRTAP9-3Q9BYQ3 159 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms