RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 LCE2AQ5TA79 106 aaPredicted RBP2.41□□□□□ -2.02
GAPVD1-206ENST00000394104 KRTAP8-1Q8IUC2 63 aa2.4□□□□□ -2.02
GAPVD1-206ENST00000394104 RYR1P21817 5038 aa2.4□□□□□ -2.02
GAPVD1-206ENST00000394104 FBN3Q75N90 2809 aa2.4□□□□□ -2.03
GAPVD1-206ENST00000394104 FBN1P35555 2871 aaKnown RBP2.39□□□□□ -2.03
GAPVD1-206ENST00000394104 DNAH7Q8WXX0 4024 aa2.39□□□□□ -2.03
GAPVD1-206ENST00000394104 ALMS1Q8TCU4 4167 aa2.39□□□□□ -2.03
GAPVD1-206ENST00000394104 KRTAP4-5Q9BYR2 181 aa2.38□□□□□ -2.03
GAPVD1-206ENST00000394104 LORP23490 312 aaPredicted RBP2.38□□□□□ -2.03
GAPVD1-206ENST00000394104 KRTAP23-1A1A580 65 aa2.37□□□□□ -2.03
GAPVD1-206ENST00000394104 HUWE1Q7Z6Z7 4374 aaKnown RBP2.36□□□□□ -2.03
GAPVD1-206ENST00000394104 COL7A1Q02388 2944 aa2.33□□□□□ -2.04
GAPVD1-206ENST00000394104 PKD1L1Q8TDX9 2849 aa2.32□□□□□ -2.04
GAPVD1-206ENST00000394104 PRKDCP78527 4128 aaKnown RBP2.31□□□□□ -2.04
GAPVD1-206ENST00000394104 FRAS1Q86XX4 4008 aa2.31□□□□□ -2.04
GAPVD1-206ENST00000394104 KRTAP10-4P60372 401 aaPredicted RBP2.29□□□□□ -2.04
GAPVD1-206ENST00000394104 DNAH1Q9P2D7 4330 aa2.28□□□□□ -2.04
GAPVD1-206ENST00000394104 RYR2Q92736 4967 aa2.26□□□□□ -2.05
GAPVD1-206ENST00000394104 DNAH6Q9C0G6 4158 aa2.25□□□□□ -2.05
GAPVD1-206ENST00000394104 SRRM2Q9UQ35 2752 aaKnown RBP2.25□□□□□ -2.05
GAPVD1-206ENST00000394104 DNHD1Q96M86 4753 aa2.24□□□□□ -2.05
GAPVD1-206ENST00000394104 MEGF8Q7Z7M0 2845 aa2.24□□□□□ -2.05
GAPVD1-206ENST00000394104 DNAH10Q8IVF4 4471 aa2.24□□□□□ -2.05
GAPVD1-206ENST00000394104 KRTAP10-7P60409 375 aaPredicted RBP2.24□□□□□ -2.05
GAPVD1-206ENST00000394104 PCLOQ9Y6V0 5065 aa2.23□□□□□ -2.05
GAPVD1-206ENST00000394104 DNAH9Q9NYC9 4486 aa2.22□□□□□ -2.05
GAPVD1-206ENST00000394104 SPRR2FQ96RM1 72 aa2.22□□□□□ -2.05
GAPVD1-206ENST00000394104 HECTD4Q9Y4D8 3996 aa2.21□□□□□ -2.06
GAPVD1-206ENST00000394104 KMT2AQ03164 3969 aa2.21□□□□□ -2.06
GAPVD1-206ENST00000394104 KIAA1109Q2LD37 5005 aa2.21□□□□□ -2.06
GAPVD1-206ENST00000394104 KRTAP19-5Q3LI72 72 aa2.21□□□□□ -2.06
GAPVD1-206ENST00000394104 DYNC2H1Q8NCM8 4307 aaKnown RBP2.2□□□□□ -2.06
GAPVD1-206ENST00000394104 DNAH3Q8TD57 4116 aa2.2□□□□□ -2.06
GAPVD1-206ENST00000394104 MT1HP80294 61 aa2.19□□□□□ -2.06
GAPVD1-206ENST00000394104 BIRC6Q9NR09 4857 aa2.18□□□□□ -2.06
GAPVD1-206ENST00000394104 LCE3CQ5T5A8 94 aa2.18□□□□□ -2.06
GAPVD1-206ENST00000394104 DNAH2Q9P225 4427 aa2.17□□□□□ -2.06
GAPVD1-206ENST00000394104 HYDINQ4G0P3 5121 aa2.17□□□□□ -2.06
GAPVD1-206ENST00000394104 KRTAP4-1Q9BYQ7 146 aa2.17□□□□□ -2.06
GAPVD1-206ENST00000394104 FAT2Q9NYQ8 4349 aa2.16□□□□□ -2.06
GAPVD1-206ENST00000394104 PLECQ15149 4684 aaKnown RBP2.16□□□□□ -2.06
GAPVD1-206ENST00000394104 DNAH5Q8TE73 4624 aa2.15□□□□□ -2.06
GAPVD1-206ENST00000394104 MYCBP2O75592 4640 aa2.15□□□□□ -2.07
GAPVD1-206ENST00000394104 RYR3Q15413 4870 aa2.14□□□□□ -2.07
GAPVD1-206ENST00000394104 MT2AP02795 61 aa2.13□□□□□ -2.07
GAPVD1-206ENST00000394104 LCE3BQ5TA77 95 aa2.13□□□□□ -2.07
GAPVD1-206ENST00000394104 SPRR2EP22531 72 aa2.12□□□□□ -2.07
GAPVD1-206ENST00000394104 SPRR2BP35325 72 aa2.12□□□□□ -2.07
GAPVD1-206ENST00000394104 SPRR2AP35326 72 aa2.12□□□□□ -2.07
GAPVD1-206ENST00000394104 DNAH8Q96JB1 4490 aa2.11□□□□□ -2.07
GAPVD1-206ENST00000394104 SPRR2GQ9BYE4 73 aa2.11□□□□□ -2.07
GAPVD1-206ENST00000394104 VPS13DQ5THJ4 4388 aa2.11□□□□□ -2.07
GAPVD1-206ENST00000394104 DYNC1H1Q14204 4646 aaKnown RBP2.1□□□□□ -2.07
GAPVD1-206ENST00000394104 DNAH11Q96DT5 4516 aa2.1□□□□□ -2.07
GAPVD1-206ENST00000394104 LOC100996750A0A140TA64 210 aa2.1□□□□□ -2.07
GAPVD1-206ENST00000394104 KRTAP4-6Q9BYQ5 205 aa2.1□□□□□ -2.07
GAPVD1-206ENST00000394104 MT1FP04733 61 aa2.1□□□□□ -2.07
GAPVD1-206ENST00000394104 VPS13BQ7Z7G8 4022 aa2.1□□□□□ -2.07
GAPVD1-206ENST00000394104 ABCA13Q86UQ4 5058 aa2.09□□□□□ -2.08
GAPVD1-206ENST00000394104 KMT2CQ8NEZ4 4911 aaKnown RBP2.08□□□□□ -2.08
GAPVD1-206ENST00000394104 PKHD1P08F94 4074 aa2.07□□□□□ -2.08
GAPVD1-206ENST00000394104 LRP1BQ9NZR2 4599 aa2.06□□□□□ -2.08
GAPVD1-206ENST00000394104 MT1GP13640 62 aa2.05□□□□□ -2.08
GAPVD1-206ENST00000394104 SPRR2DP22532 72 aa2.05□□□□□ -2.08
GAPVD1-206ENST00000394104 DNAH17Q9UFH2 4485 aa2.04□□□□□ -2.08
GAPVD1-206ENST00000394104 HERC1Q15751 4861 aa2.03□□□□□ -2.08
GAPVD1-206ENST00000394104 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
GAPVD1-206ENST00000394104 PKHD1L1Q86WI1 4243 aa2.03□□□□□ -2.08
GAPVD1-206ENST00000394104 STARD9Q9P2P6 4700 aa2.02□□□□□ -2.09
GAPVD1-206ENST00000394104 HERC2O95714 4834 aa2.02□□□□□ -2.09
GAPVD1-206ENST00000394104 FAT1Q14517 4588 aa2.01□□□□□ -2.09
GAPVD1-206ENST00000394104 KRTAP9-6A0A140TA67 174 aa2.01□□□□□ -2.09
GAPVD1-206ENST00000394104 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.01□□□□□ -2.09
GAPVD1-206ENST00000394104 PKD1P98161 4303 aa2□□□□□ -2.09
GAPVD1-206ENST00000394104 KRTAP9-2Q9BYQ4 174 aa1.99□□□□□ -2.09
GAPVD1-206ENST00000394104 SACSQ9NZJ4 4579 aa1.99□□□□□ -2.09
GAPVD1-206ENST00000394104 EPPK1P58107 5090 aaKnown RBP1.98□□□□□ -2.09
GAPVD1-206ENST00000394104 KRTAP4-8Q9BYQ9 185 aa1.96□□□□□ -2.1
GAPVD1-206ENST00000394104 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
GAPVD1-206ENST00000394104 APOBP04114 4563 aaKnown RBP1.95□□□□□ -2.1
GAPVD1-206ENST00000394104 KRTAP19-4Q3LI73 84 aa1.95□□□□□ -2.1
GAPVD1-206ENST00000394104 MT1XP80297 61 aa1.92□□□□□ -2.1
GAPVD1-206ENST00000394104 RNF213Q63HN8 5207 aa1.92□□□□□ -2.1
GAPVD1-206ENST00000394104 LPAP08519 4548 aa1.92□□□□□ -2.1
GAPVD1-206ENST00000394104 LCE4AQ5TA78 99 aa1.92□□□□□ -2.1
GAPVD1-206ENST00000394104 USH2AO75445 5202 aa1.92□□□□□ -2.1
GAPVD1-206ENST00000394104 TNXBP22105 4242 aa1.92□□□□□ -2.1
GAPVD1-206ENST00000394104 KRTAP4-8A0A0G2JLE6 195 aa1.92□□□□□ -2.1
GAPVD1-206ENST00000394104 UBR4Q5T4S7 5183 aa1.91□□□□□ -2.1
GAPVD1-206ENST00000394104 LCE3EQ5T5B0 92 aa1.9□□□□□ -2.1
GAPVD1-206ENST00000394104 HMCN2Q8NDA2 5059 aa1.9□□□□□ -2.11
GAPVD1-206ENST00000394104 KRTAP19-8Q3LI54 63 aa1.89□□□□□ -2.11
GAPVD1-206ENST00000394104 KRTAP19-1Q8IUB9 90 aa1.89□□□□□ -2.11
GAPVD1-206ENST00000394104 HSPG2P98160 4391 aa1.89□□□□□ -2.11
GAPVD1-206ENST00000394104 KRTAP9-9Q9BYP9 154 aa1.88□□□□□ -2.11
GAPVD1-206ENST00000394104 KRTAP9-4Q9BYQ2 154 aa1.88□□□□□ -2.11
GAPVD1-206ENST00000394104 KRTAP4-12Q9BQ66 201 aa1.85□□□□□ -2.11
GAPVD1-206ENST00000394104 MT1BP07438 61 aa1.85□□□□□ -2.11
GAPVD1-206ENST00000394104 MT4P47944 62 aa1.85□□□□□ -2.11
GAPVD1-206ENST00000394104 FAT3Q8TDW7 4589 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms