RNA–Protein interactions for RNA: ENST00000393203.2

PTGFRN-201, Transcript of prostaglandin F2 receptor inhibitor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTGFRN, Length 6,178 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRN-201ENST00000393203 AKAP9Q99996 3911 aa6.51□□□□□ -1.37
PTGFRN-201ENST00000393203 ZNF469Q96JG9 3925 aaPredicted RBP6.49□□□□□ -1.37
PTGFRN-201ENST00000393203 DNAH9Q9NYC9 4486 aa6.4□□□□□ -1.38
PTGFRN-201ENST00000393203 ALMS1Q8TCU4 4167 aa6.4□□□□□ -1.39
PTGFRN-201ENST00000393203 DNAH1Q9P2D7 4330 aa6.4□□□□□ -1.39
PTGFRN-201ENST00000393203 DNAH10Q8IVF4 4471 aa6.37□□□□□ -1.39
PTGFRN-201ENST00000393203 DNAH5Q8TE73 4624 aa6.35□□□□□ -1.39
PTGFRN-201ENST00000393203 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
PTGFRN-201ENST00000393203 PLECQ15149 4684 aaKnown RBP6.29□□□□□ -1.4
PTGFRN-201ENST00000393203 DNAH11Q96DT5 4516 aa6.27□□□□□ -1.41
PTGFRN-201ENST00000393203 KRTAP10-5P60370 271 aa6.26□□□□□ -1.41
PTGFRN-201ENST00000393203 DNAH2Q9P225 4427 aa6.24□□□□□ -1.41
PTGFRN-201ENST00000393203 KRTAP4-1Q9BYQ7 146 aa6.21□□□□□ -1.42
PTGFRN-201ENST00000393203 DNAH17Q9UFH2 4485 aa6.12□□□□□ -1.43
PTGFRN-201ENST00000393203 DNAH8Q96JB1 4490 aa6.12□□□□□ -1.43
PTGFRN-201ENST00000393203 KRTAP8-1Q8IUC2 63 aa6.07□□□□□ -1.44
PTGFRN-201ENST00000393203 FAT1Q14517 4588 aa6.06□□□□□ -1.44
PTGFRN-201ENST00000393203 VPS13DQ5THJ4 4388 aa6.06□□□□□ -1.44
PTGFRN-201ENST00000393203 ANK2Q01484 3957 aa6.05□□□□□ -1.44
PTGFRN-201ENST00000393203 DNAH3Q8TD57 4116 aa6.01□□□□□ -1.45
PTGFRN-201ENST00000393203 STARD9Q9P2P6 4700 aa6□□□□□ -1.45
PTGFRN-201ENST00000393203 LRP1BQ9NZR2 4599 aa6□□□□□ -1.45
PTGFRN-201ENST00000393203 MT1HP80294 61 aa5.98□□□□□ -1.45
PTGFRN-201ENST00000393203 DYNC1H1Q14204 4646 aaKnown RBP5.97□□□□□ -1.45
PTGFRN-201ENST00000393203 FRAS1Q86XX4 4008 aa5.93□□□□□ -1.46
PTGFRN-201ENST00000393203 MT2AP02795 61 aa5.93□□□□□ -1.46
PTGFRN-201ENST00000393203 SACSQ9NZJ4 4579 aa5.91□□□□□ -1.46
PTGFRN-201ENST00000393203 KMT2AQ03164 3969 aa5.9□□□□□ -1.47
PTGFRN-201ENST00000393203 DNHD1Q96M86 4753 aa5.88□□□□□ -1.47
PTGFRN-201ENST00000393203 FAT2Q9NYQ8 4349 aa5.88□□□□□ -1.47
PTGFRN-201ENST00000393203 KRTAP19-5Q3LI72 72 aa5.87□□□□□ -1.47
PTGFRN-201ENST00000393203 SPRR2GQ9BYE4 73 aa5.87□□□□□ -1.47
PTGFRN-201ENST00000393203 MT1FP04733 61 aa5.86□□□□□ -1.47
PTGFRN-201ENST00000393203 VPS13BQ7Z7G8 4022 aa5.86□□□□□ -1.47
PTGFRN-201ENST00000393203 DYNC2H1Q8NCM8 4307 aaKnown RBP5.84□□□□□ -1.47
PTGFRN-201ENST00000393203 APOBP04114 4563 aaKnown RBP5.81□□□□□ -1.48
PTGFRN-201ENST00000393203 RYR1P21817 5038 aa5.81□□□□□ -1.48
PTGFRN-201ENST00000393203 LYSTQ99698 3801 aa5.8□□□□□ -1.48
PTGFRN-201ENST00000393203 LCE3CQ5T5A8 94 aa5.76□□□□□ -1.49
PTGFRN-201ENST00000393203 MYCBP2O75592 4640 aa5.72□□□□□ -1.49
PTGFRN-201ENST00000393203 PRKDCP78527 4128 aaKnown RBP5.72□□□□□ -1.49
PTGFRN-201ENST00000393203 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.5
PTGFRN-201ENST00000393203 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.51
PTGFRN-201ENST00000393203 CMYA5Q8N3K9 4069 aa5.62□□□□□ -1.51
PTGFRN-201ENST00000393203 DNAH6Q9C0G6 4158 aa5.61□□□□□ -1.51
PTGFRN-201ENST00000393203 DNAH7Q8WXX0 4024 aa5.57□□□□□ -1.52
PTGFRN-201ENST00000393203 KRTAP17-1Q9BYP8 105 aa5.55□□□□□ -1.52
PTGFRN-201ENST00000393203 HECTD4Q9Y4D8 3996 aa5.53□□□□□ -1.52
PTGFRN-201ENST00000393203 KRTAP19-1Q8IUB9 90 aa5.52□□□□□ -1.53
PTGFRN-201ENST00000393203 LRP1Q07954 4544 aaKnown RBP5.52□□□□□ -1.53
PTGFRN-201ENST00000393203 FAT3Q8TDW7 4589 aa5.51□□□□□ -1.53
PTGFRN-201ENST00000393203 RYR3Q15413 4870 aa5.48□□□□□ -1.53
PTGFRN-201ENST00000393203 LCE3BQ5TA77 95 aa5.46□□□□□ -1.54
PTGFRN-201ENST00000393203 MT1XP80297 61 aa5.43□□□□□ -1.54
PTGFRN-201ENST00000393203 MT1GP13640 62 aa5.38□□□□□ -1.55
PTGFRN-201ENST00000393203 KRTAP19-8Q3LI54 63 aa5.38□□□□□ -1.55
PTGFRN-201ENST00000393203 KRTAP4-8A0A0G2JLE6 195 aa5.35□□□□□ -1.55
PTGFRN-201ENST00000393203 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
PTGFRN-201ENST00000393203 KRTAP12-4P60329 112 aa5.35□□□□□ -1.55
PTGFRN-201ENST00000393203 MT1BP07438 61 aa5.32□□□□□ -1.56
PTGFRN-201ENST00000393203 KIAA1109Q2LD37 5005 aa5.3□□□□□ -1.56
PTGFRN-201ENST00000393203 LPAP08519 4548 aa5.28□□□□□ -1.56
PTGFRN-201ENST00000393203 SPRR5A0A1B0GTR4 108 aa5.27□□□□□ -1.57
PTGFRN-201ENST00000393203 LRP2P98164 4655 aa5.24□□□□□ -1.57
PTGFRN-201ENST00000393203 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
PTGFRN-201ENST00000393203 SPRR2EP22531 72 aa5.23□□□□□ -1.57
PTGFRN-201ENST00000393203 SPRR2BP35325 72 aa5.23□□□□□ -1.57
PTGFRN-201ENST00000393203 SPRR2AP35326 72 aa5.23□□□□□ -1.57
PTGFRN-201ENST00000393203 HYDINQ4G0P3 5121 aa5.22□□□□□ -1.57
PTGFRN-201ENST00000393203 KRTAP19-4Q3LI73 84 aa5.18□□□□□ -1.58
PTGFRN-201ENST00000393203 HSPG2P98160 4391 aa5.18□□□□□ -1.58
PTGFRN-201ENST00000393203 RYR2Q92736 4967 aa5.18□□□□□ -1.58
PTGFRN-201ENST00000393203 KRTAP4-7Q9BYR0 210 aa5.17□□□□□ -1.58
PTGFRN-201ENST00000393203 PKHD1P08F94 4074 aa5.17□□□□□ -1.58
PTGFRN-201ENST00000393203 PKD1P98161 4303 aa5.12□□□□□ -1.59
PTGFRN-201ENST00000393203 LCE2CQ5TA81 110 aa5.11□□□□□ -1.59
PTGFRN-201ENST00000393203 KRTAP9-3Q9BYQ3 159 aa5.09□□□□□ -1.6
PTGFRN-201ENST00000393203 LCE3DQ9BYE3 92 aa5.05□□□□□ -1.6
PTGFRN-201ENST00000393203 SPRR2DP22532 72 aa5.03□□□□□ -1.6
PTGFRN-201ENST00000393203 LCE2BO14633 110 aa5.01□□□□□ -1.61
PTGFRN-201ENST00000393203 KMT2CQ8NEZ4 4911 aaKnown RBP5□□□□□ -1.61
PTGFRN-201ENST00000393203 HERC2O95714 4834 aa4.99□□□□□ -1.61
PTGFRN-201ENST00000393203 TNXBP22105 4242 aa4.97□□□□□ -1.61
PTGFRN-201ENST00000393203 LCE3EQ5T5B0 92 aa4.96□□□□□ -1.62
PTGFRN-201ENST00000393203 PKHD1L1Q86WI1 4243 aa4.92□□□□□ -1.62
PTGFRN-201ENST00000393203 MT1LQ93083 61 aa4.91□□□□□ -1.62
PTGFRN-201ENST00000393203 HERC1Q15751 4861 aa4.89□□□□□ -1.63
PTGFRN-201ENST00000393203 PCLOQ9Y6V0 5065 aa4.87□□□□□ -1.63
PTGFRN-201ENST00000393203 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
PTGFRN-201ENST00000393203 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
PTGFRN-201ENST00000393203 KRTAP19-2Q3LHN2 52 aa4.85□□□□□ -1.63
PTGFRN-201ENST00000393203 MT1EP04732 61 aa4.84□□□□□ -1.63
PTGFRN-201ENST00000393203 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
PTGFRN-201ENST00000393203 FLGP20930 4061 aaPredicted RBP4.79□□□□□ -1.64
PTGFRN-201ENST00000393203 PRM1P04553 51 aa4.76□□□□□ -1.65
PTGFRN-201ENST00000393203 MUC17Q685J3 4493 aa4.76□□□□□ -1.65
PTGFRN-201ENST00000393203 MT1MQ8N339 61 aa4.69□□□□□ -1.66
PTGFRN-201ENST00000393203 BIRC6Q9NR09 4857 aa4.69□□□□□ -1.66
PTGFRN-201ENST00000393203 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
PTGFRN-201ENST00000393203 LCE2DQ5TA82 110 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 420 ms