RNA–Protein interactions for RNA: ENST00000393203.2

PTGFRN-201, Transcript of prostaglandin F2 receptor inhibitor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTGFRN, Length 6,178 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRN-201ENST00000393203 DCAF8L2P0C7V8 631 aa26.13■■□□□ 1.77
PTGFRN-201ENST00000393203 SUPT5HO00267 1087 aaKnown RBP25.26■■□□□ 1.63
PTGFRN-201ENST00000393203 EHMT2Q96KQ7 1210 aa24.8■■□□□ 1.56
PTGFRN-201ENST00000393203 SHROOM4Q9ULL8 1493 aa24.76■■□□□ 1.55
PTGFRN-201ENST00000393203 NISCHQ9Y2I1 1504 aa24.35■■□□□ 1.49
PTGFRN-201ENST00000393203 PELP1Q8IZL8 1130 aaKnown RBP24.09■■□□□ 1.45
PTGFRN-201ENST00000393203 PCGF6Q9BYE7 350 aa24.07■■□□□ 1.44
PTGFRN-201ENST00000393203 TTBK1Q5TCY1 1321 aaPredicted RBP23.99■■□□□ 1.43
PTGFRN-201ENST00000393203 FAM9AQ8IZU1 332 aaPredicted RBP23.92■■□□□ 1.42
PTGFRN-201ENST00000393203 APLP2Q06481 763 aa23.7■■□□□ 1.38
PTGFRN-201ENST00000393203 CENPBP07199 599 aaPredicted RBP23.46■■□□□ 1.35
PTGFRN-201ENST00000393203 RANGAP1P46060 587 aaPredicted RBP23.44■■□□□ 1.34
PTGFRN-201ENST00000393203 CCER1Q8TC90 406 aaPredicted RBP23.4■■□□□ 1.34
PTGFRN-201ENST00000393203 ERICH6Q7L0X2 663 aa23.38■■□□□ 1.33
PTGFRN-201ENST00000393203 YTHDC1Q96MU7 727 aaKnown RBP23.32■■□□□ 1.32
PTGFRN-201ENST00000393203 ZEB1P37275 1124 aaPredicted RBP23.25■■□□□ 1.31
PTGFRN-201ENST00000393203 TRIM41Q8WV44 630 aa23.16■■□□□ 1.3
PTGFRN-201ENST00000393203 PPARGC1BQ86YN6 1023 aaKnown RBP23.14■■□□□ 1.3
PTGFRN-201ENST00000393203 ATP1B4Q9UN42 357 aaPredicted RBP23.01■■□□□ 1.27
PTGFRN-201ENST00000393203 UBTFP17480 764 aaKnown RBP22.9■■□□□ 1.26
PTGFRN-201ENST00000393203 NEFLP07196 543 aa22.86■■□□□ 1.25
PTGFRN-201ENST00000393203 HRCP23327 699 aa22.81■■□□□ 1.24
PTGFRN-201ENST00000393203 MYT1Q01538 1121 aa22.76■■□□□ 1.23
PTGFRN-201ENST00000393203 TRIM26Q12899 539 aaPredicted RBP22.72■■□□□ 1.23
PTGFRN-201ENST00000393203 LOC105371045A0A1W2PR82 267 aa22.63■■□□□ 1.21
PTGFRN-201ENST00000393203 ITGAEP38570 1179 aa22.46■■□□□ 1.19
PTGFRN-201ENST00000393203 HNRNPUL2Q1KMD3 747 aaKnown RBP22.36■■□□□ 1.17
PTGFRN-201ENST00000393203 CNGB1Q14028 1251 aaPredicted RBP22.36■■□□□ 1.17
PTGFRN-201ENST00000393203 POLR3GLQ9BT43 218 aa22.34■■□□□ 1.17
PTGFRN-201ENST00000393203 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
PTGFRN-201ENST00000393203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.29■■□□□ 1.16
PTGFRN-201ENST00000393203 DAXXQ9UER7 740 aaPredicted RBP22.18■■□□□ 1.14
PTGFRN-201ENST00000393203 DIEXFQ68CQ4 756 aaKnown RBP22.17■■□□□ 1.14
PTGFRN-201ENST00000393203 GTF3C3Q9Y5Q9 886 aa22.01■■□□□ 1.11
PTGFRN-201ENST00000393203 BCANQ96GW7 911 aa22■■□□□ 1.11
PTGFRN-201ENST00000393203 MYT1LQ9UL68 1186 aa21.85■■□□□ 1.09
PTGFRN-201ENST00000393203 RTL5Q5HYW3 569 aaPredicted RBP21.85■■□□□ 1.09
PTGFRN-201ENST00000393203 ZNF316A6NFI3 1004 aaPredicted RBP21.75■■□□□ 1.07
PTGFRN-201ENST00000393203 NEUROD1Q13562 356 aa21.74■■□□□ 1.07
PTGFRN-201ENST00000393203 CLSPNQ9HAW4 1339 aa21.72■■□□□ 1.07
PTGFRN-201ENST00000393203 SLC4A1APQ9BWU0 796 aaKnown RBP21.7■■□□□ 1.06
PTGFRN-201ENST00000393203 FAM50AQ14320 339 aaKnown RBP21.7■■□□□ 1.06
PTGFRN-201ENST00000393203 ACIN1Q9UKV3 1341 aaKnown RBP21.56■■□□□ 1.04
PTGFRN-201ENST00000393203 TRIM52Q96A61 297 aa21.55■■□□□ 1.04
PTGFRN-201ENST00000393203 CDK11AQ9UQ88 783 aaPredicted RBP21.49■■□□□ 1.03
PTGFRN-201ENST00000393203 ANP32CO43423 234 aa21.47■■□□□ 1.03
PTGFRN-201ENST00000393203 ZNF326Q5BKZ1 582 aaKnown RBP21.45■■□□□ 1.02
PTGFRN-201ENST00000393203 BCL11AQ9H165 835 aa21.33■■□□□ 1
PTGFRN-201ENST00000393203 NPM2Q86SE8 214 aaKnown RBP21.25■□□□□ 0.99
PTGFRN-201ENST00000393203 FKBP8Q14318 412 aa21.2■□□□□ 0.98
PTGFRN-201ENST00000393203 PABPN1Q86U42 306 aaKnown RBP eCLIP21.2■□□□□ 0.98
PTGFRN-201ENST00000393203 P3H3Q8IVL6 736 aa21.13■□□□□ 0.97
PTGFRN-201ENST00000393203 ANP32AP39687 249 aaKnown RBP21.12■□□□□ 0.97
PTGFRN-201ENST00000393203 ARID3CA6NKF2 412 aa21.12■□□□□ 0.97
PTGFRN-201ENST00000393203 CANXP27824 592 aaKnown RBP21.11■□□□□ 0.97
PTGFRN-201ENST00000393203 SCAF1Q9H7N4 1312 aaKnown RBP21.1■□□□□ 0.97
PTGFRN-201ENST00000393203 EIF5BO60841 1220 aaKnown RBP21.07■□□□□ 0.96
PTGFRN-201ENST00000393203 ZBTB47Q9UFB7 747 aaPredicted RBP21.01■□□□□ 0.95
PTGFRN-201ENST00000393203 DDX10Q13206 875 aaKnown RBP20.97■□□□□ 0.95
PTGFRN-201ENST00000393203 SLC24A1O60721 1099 aa20.96■□□□□ 0.95
PTGFRN-201ENST00000393203 NBR1Q14596 966 aa20.96■□□□□ 0.95
PTGFRN-201ENST00000393203 HNRNPUQ00839 825 aaKnown RBP eCLIP20.96■□□□□ 0.95
PTGFRN-201ENST00000393203 ABCC9O60706 1549 aa20.93■□□□□ 0.94
PTGFRN-201ENST00000393203 CSRNP3Q8WYN3 585 aa20.92■□□□□ 0.94
PTGFRN-201ENST00000393203 FAM9BQ8IZU0 186 aa20.92■□□□□ 0.94
PTGFRN-201ENST00000393203 SALL2Q9Y467 1007 aaPredicted RBP20.91■□□□□ 0.94
PTGFRN-201ENST00000393203 FBLN2P98095 1184 aa20.89■□□□□ 0.94
PTGFRN-201ENST00000393203 IRX6P78412 446 aaPredicted RBP20.87■□□□□ 0.93
PTGFRN-201ENST00000393203 MIER1Q8N108 512 aa20.85■□□□□ 0.93
PTGFRN-201ENST00000393203 ZNF777Q9ULD5 760 aaPredicted RBP20.84■□□□□ 0.93
PTGFRN-201ENST00000393203 ARXQ96QS3 562 aa20.8■□□□□ 0.92
PTGFRN-201ENST00000393203 DCAF1Q9Y4B6 1507 aa20.79■□□□□ 0.92
PTGFRN-201ENST00000393203 HIRIP3Q9BW71 556 aaPredicted RBP20.78■□□□□ 0.92
PTGFRN-201ENST00000393203 TONSLQ96HA7 1378 aa20.76■□□□□ 0.91
PTGFRN-201ENST00000393203 CCDC136Q96JN2 1154 aa20.71■□□□□ 0.91
PTGFRN-201ENST00000393203 NEFMP07197 916 aa20.69■□□□□ 0.9
PTGFRN-201ENST00000393203 HSP90AA1P07900 732 aaKnown RBP20.68■□□□□ 0.9
PTGFRN-201ENST00000393203 CHIC2Q9UKJ5 165 aa20.63■□□□□ 0.89
PTGFRN-201ENST00000393203 ANP32BQ92688 251 aaKnown RBP20.61■□□□□ 0.89
PTGFRN-201ENST00000393203 SENP3-EIF4A1A0A087X0R7 540 aa20.61■□□□□ 0.89
PTGFRN-201ENST00000393203 MYO15BQ96JP2 1530 aa20.6■□□□□ 0.89
PTGFRN-201ENST00000393203 MRS2Q9HD23 443 aa20.58■□□□□ 0.88
PTGFRN-201ENST00000393203 TMC1Q8TDI8 760 aa20.57■□□□□ 0.88
PTGFRN-201ENST00000393203 UPF2Q9HAU5 1272 aaKnown RBP20.56■□□□□ 0.88
PTGFRN-201ENST00000393203 CHGAP10645 457 aaKnown RBP20.52■□□□□ 0.88
PTGFRN-201ENST00000393203 KDM2AQ9Y2K7 1162 aa20.47■□□□□ 0.87
PTGFRN-201ENST00000393203 GLIPR1L2Q4G1C9 344 aa20.43■□□□□ 0.86
PTGFRN-201ENST00000393203 SCRIBQ14160 1630 aa20.43■□□□□ 0.86
PTGFRN-201ENST00000393203 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.42■□□□□ 0.86
PTGFRN-201ENST00000393203 ANP32EQ9BTT0 268 aa20.41■□□□□ 0.86
PTGFRN-201ENST00000393203 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.38■□□□□ 0.85
PTGFRN-201ENST00000393203 WDR43Q15061 677 aaKnown RBP eCLIP20.38■□□□□ 0.85
PTGFRN-201ENST00000393203 SUPT16HQ9Y5B9 1047 aaKnown RBP20.35■□□□□ 0.85
PTGFRN-201ENST00000393203 RTN4Q9NQC3 1192 aaKnown RBP20.34■□□□□ 0.85
PTGFRN-201ENST00000393203 PLPPR3Q6T4P5 718 aa20.33■□□□□ 0.84
PTGFRN-201ENST00000393203 SENP3Q9H4L4 574 aaPredicted RBP20.32■□□□□ 0.84
PTGFRN-201ENST00000393203 RRP7BPQ9NSQ0 103 aa20.29■□□□□ 0.84
PTGFRN-201ENST00000393203 STAG3Q9UJ98 1225 aa20.26■□□□□ 0.83
PTGFRN-201ENST00000393203 EIF4G2P78344 907 aaKnown RBP eCLIP20.26■□□□□ 0.832e-6■■■□□ 15.2
PTGFRN-201ENST00000393203 LAS1LQ9Y4W2 734 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms