RNA–Protein interactions for RNA: ENST00000382203.5

SMARCA2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-209ENST00000382203 PLECQ15149 4684 aaKnown RBP5.38□□□□□ -1.55
SMARCA2-209ENST00000382203 DNAH3Q8TD57 4116 aa5.38□□□□□ -1.55
SMARCA2-209ENST00000382203 DNAH10Q8IVF4 4471 aa5.37□□□□□ -1.55
SMARCA2-209ENST00000382203 KRTAP3-2Q9BYR7 98 aa5.35□□□□□ -1.55
SMARCA2-209ENST00000382203 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
SMARCA2-209ENST00000382203 DNHD1Q96M86 4753 aa5.31□□□□□ -1.56
SMARCA2-209ENST00000382203 STARD9Q9P2P6 4700 aa5.29□□□□□ -1.56
SMARCA2-209ENST00000382203 PRKDCP78527 4128 aaKnown RBP5.27□□□□□ -1.57
SMARCA2-209ENST00000382203 LYSTQ99698 3801 aa5.26□□□□□ -1.57
SMARCA2-209ENST00000382203 DNAH1Q9P2D7 4330 aa5.24□□□□□ -1.57
SMARCA2-209ENST00000382203 VPS13DQ5THJ4 4388 aa5.22□□□□□ -1.57
SMARCA2-209ENST00000382203 MT1HL1P0DM35 61 aa5.21□□□□□ -1.58
SMARCA2-209ENST00000382203 KRTAP3-3Q9BYR6 98 aa5.2□□□□□ -1.58
SMARCA2-209ENST00000382203 DNAH7Q8WXX0 4024 aa5.16□□□□□ -1.58
SMARCA2-209ENST00000382203 DNAH11Q96DT5 4516 aa5.14□□□□□ -1.59
SMARCA2-209ENST00000382203 KMT2AQ03164 3969 aa5.14□□□□□ -1.59
SMARCA2-209ENST00000382203 DNAH17Q9UFH2 4485 aa5.13□□□□□ -1.59
SMARCA2-209ENST00000382203 DYNC2H1Q8NCM8 4307 aaKnown RBP5.13□□□□□ -1.59
SMARCA2-209ENST00000382203 KRTAP8-1Q8IUC2 63 aa5.1□□□□□ -1.59
SMARCA2-209ENST00000382203 DNAH2Q9P225 4427 aa5.07□□□□□ -1.6
SMARCA2-209ENST00000382203 DNAH8Q96JB1 4490 aa5.05□□□□□ -1.6
SMARCA2-209ENST00000382203 LRP1BQ9NZR2 4599 aa5.03□□□□□ -1.6
SMARCA2-209ENST00000382203 DNAH5Q8TE73 4624 aa5.03□□□□□ -1.6
SMARCA2-209ENST00000382203 HECTD4Q9Y4D8 3996 aa5.01□□□□□ -1.61
SMARCA2-209ENST00000382203 ALMS1Q8TCU4 4167 aa5□□□□□ -1.61
SMARCA2-209ENST00000382203 DNAH6Q9C0G6 4158 aa4.97□□□□□ -1.61
SMARCA2-209ENST00000382203 FRAS1Q86XX4 4008 aa4.96□□□□□ -1.61
SMARCA2-209ENST00000382203 KRTAP4-5Q9BYR2 181 aa4.96□□□□□ -1.61
SMARCA2-209ENST00000382203 KRTAP10-7P60409 375 aaPredicted RBP4.95□□□□□ -1.62
SMARCA2-209ENST00000382203 HYDINQ4G0P3 5121 aa4.95□□□□□ -1.62
SMARCA2-209ENST00000382203 DYNC1H1Q14204 4646 aaKnown RBP4.94□□□□□ -1.62
SMARCA2-209ENST00000382203 KRTAP10-4P60372 401 aaPredicted RBP4.93□□□□□ -1.62
SMARCA2-209ENST00000382203 FAT1Q14517 4588 aa4.92□□□□□ -1.62
SMARCA2-209ENST00000382203 LORP23490 312 aaPredicted RBP4.9□□□□□ -1.62
SMARCA2-209ENST00000382203 VPS13BQ7Z7G8 4022 aa4.87□□□□□ -1.63
SMARCA2-209ENST00000382203 SACSQ9NZJ4 4579 aa4.85□□□□□ -1.63
SMARCA2-209ENST00000382203 FAT2Q9NYQ8 4349 aa4.83□□□□□ -1.64
SMARCA2-209ENST00000382203 PKHD1P08F94 4074 aa4.81□□□□□ -1.64
SMARCA2-209ENST00000382203 RYR2Q92736 4967 aa4.78□□□□□ -1.64
SMARCA2-209ENST00000382203 PKD1P98161 4303 aa4.77□□□□□ -1.65
SMARCA2-209ENST00000382203 APOBP04114 4563 aaKnown RBP4.74□□□□□ -1.65
SMARCA2-209ENST00000382203 KMT2CQ8NEZ4 4911 aaKnown RBP4.74□□□□□ -1.65
SMARCA2-209ENST00000382203 KIAA1109Q2LD37 5005 aa4.72□□□□□ -1.65
SMARCA2-209ENST00000382203 MT1HP80294 61 aa4.69□□□□□ -1.66
SMARCA2-209ENST00000382203 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
SMARCA2-209ENST00000382203 LRP1Q07954 4544 aaKnown RBP4.68□□□□□ -1.66
SMARCA2-209ENST00000382203 RYR3Q15413 4870 aa4.67□□□□□ -1.66
SMARCA2-209ENST00000382203 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
SMARCA2-209ENST00000382203 SPRR2FQ96RM1 72 aa4.67□□□□□ -1.66
SMARCA2-209ENST00000382203 MYCBP2O75592 4640 aa4.65□□□□□ -1.67
SMARCA2-209ENST00000382203 RYR1P21817 5038 aa4.65□□□□□ -1.67
SMARCA2-209ENST00000382203 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
SMARCA2-209ENST00000382203 MT2AP02795 61 aa4.59□□□□□ -1.67
SMARCA2-209ENST00000382203 SPRR2GQ9BYE4 73 aa4.59□□□□□ -1.67
SMARCA2-209ENST00000382203 KRTAP17-1Q9BYP8 105 aa4.59□□□□□ -1.67
SMARCA2-209ENST00000382203 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
SMARCA2-209ENST00000382203 KRTAP4-1Q9BYQ7 146 aa4.54□□□□□ -1.68
SMARCA2-209ENST00000382203 HSPG2P98160 4391 aa4.54□□□□□ -1.68
SMARCA2-209ENST00000382203 FAT3Q8TDW7 4589 aa4.54□□□□□ -1.68
SMARCA2-209ENST00000382203 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
SMARCA2-209ENST00000382203 SPRR2EP22531 72 aa4.47□□□□□ -1.69
SMARCA2-209ENST00000382203 SPRR2BP35325 72 aa4.47□□□□□ -1.69
SMARCA2-209ENST00000382203 SPRR2AP35326 72 aa4.47□□□□□ -1.69
SMARCA2-209ENST00000382203 PKHD1L1Q86WI1 4243 aa4.47□□□□□ -1.69
SMARCA2-209ENST00000382203 MT1FP04733 61 aa4.46□□□□□ -1.7
SMARCA2-209ENST00000382203 EPPK1P58107 5090 aaKnown RBP4.46□□□□□ -1.7
SMARCA2-209ENST00000382203 TNXBP22105 4242 aa4.41□□□□□ -1.7
SMARCA2-209ENST00000382203 LRP2P98164 4655 aa4.41□□□□□ -1.7
SMARCA2-209ENST00000382203 MT3P25713 68 aa4.39□□□□□ -1.71
SMARCA2-209ENST00000382203 HERC2O95714 4834 aa4.38□□□□□ -1.71
SMARCA2-209ENST00000382203 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
SMARCA2-209ENST00000382203 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
SMARCA2-209ENST00000382203 SPRR2DP22532 72 aa4.34□□□□□ -1.71
SMARCA2-209ENST00000382203 ABCA13Q86UQ4 5058 aa4.32□□□□□ -1.72
SMARCA2-209ENST00000382203 LPAP08519 4548 aa4.29□□□□□ -1.72
SMARCA2-209ENST00000382203 LCE2BO14633 110 aa4.27□□□□□ -1.73
SMARCA2-209ENST00000382203 BIRC6Q9NR09 4857 aa4.26□□□□□ -1.73
SMARCA2-209ENST00000382203 MT1GP13640 62 aa4.23□□□□□ -1.73
SMARCA2-209ENST00000382203 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
SMARCA2-209ENST00000382203 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
SMARCA2-209ENST00000382203 PRM1P04553 51 aa4.13□□□□□ -1.75
SMARCA2-209ENST00000382203 MT1XP80297 61 aa4.1□□□□□ -1.75
SMARCA2-209ENST00000382203 HERC1Q15751 4861 aa4.09□□□□□ -1.76
SMARCA2-209ENST00000382203 MUC2Q02817 5179 aa4.05□□□□□ -1.76
SMARCA2-209ENST00000382203 KRTAP19-1Q8IUB9 90 aa4.05□□□□□ -1.76
SMARCA2-209ENST00000382203 PCLOQ9Y6V0 5065 aa4.04□□□□□ -1.76
SMARCA2-209ENST00000382203 KRTAP19-2Q3LHN2 52 aa4.03□□□□□ -1.76
SMARCA2-209ENST00000382203 LCE2CQ5TA81 110 aa4.02□□□□□ -1.77
SMARCA2-209ENST00000382203 HMCN2Q8NDA2 5059 aa3.99□□□□□ -1.77
SMARCA2-209ENST00000382203 MT1BP07438 61 aa3.98□□□□□ -1.77
SMARCA2-209ENST00000382203 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
SMARCA2-209ENST00000382203 MUC17Q685J3 4493 aa3.98□□□□□ -1.77
SMARCA2-209ENST00000382203 LCE2DQ5TA82 110 aaPredicted RBP3.96□□□□□ -1.78
SMARCA2-209ENST00000382203 RNF213Q63HN8 5207 aa3.94□□□□□ -1.78
SMARCA2-209ENST00000382203 FLGP20930 4061 aaPredicted RBP3.93□□□□□ -1.78
SMARCA2-209ENST00000382203 KRTAP4-8A0A0G2JLE6 195 aa3.93□□□□□ -1.78
SMARCA2-209ENST00000382203 KRTAP4-8Q9BYQ9 185 aa3.93□□□□□ -1.78
SMARCA2-209ENST00000382203 FAT4Q6V0I7 4981 aa3.93□□□□□ -1.78
SMARCA2-209ENST00000382203 UBR4Q5T4S7 5183 aa3.92□□□□□ -1.78
SMARCA2-209ENST00000382203 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms