RNA–Protein interactions for RNA: ENST00000382203.5

SMARCA2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-209ENST00000382203 PELP1Q8IZL8 1130 aaKnown RBP20.75■□□□□ 0.91
SMARCA2-209ENST00000382203 DCAF8L2P0C7V8 631 aa20.33■□□□□ 0.85
SMARCA2-209ENST00000382203 MYT1Q01538 1121 aa20.28■□□□□ 0.84
SMARCA2-209ENST00000382203 ERICH6Q7L0X2 663 aa20.01■□□□□ 0.79
SMARCA2-209ENST00000382203 CCER1Q8TC90 406 aaPredicted RBP19.73■□□□□ 0.75
SMARCA2-209ENST00000382203 CENPBP07199 599 aaPredicted RBP19.34■□□□□ 0.69
SMARCA2-209ENST00000382203 TTBK1Q5TCY1 1321 aaPredicted RBP19.29■□□□□ 0.68
SMARCA2-209ENST00000382203 SUPT5HO00267 1087 aaKnown RBP19.15■□□□□ 0.66
SMARCA2-209ENST00000382203 YTHDC1Q96MU7 727 aaKnown RBP19.07■□□□□ 0.64
SMARCA2-209ENST00000382203 NEFLP07196 543 aa18.9■□□□□ 0.62
SMARCA2-209ENST00000382203 APLP2Q06481 763 aa18.87■□□□□ 0.61
SMARCA2-209ENST00000382203 EHMT2Q96KQ7 1210 aa18.84■□□□□ 0.61
SMARCA2-209ENST00000382203 FAM9AQ8IZU1 332 aaPredicted RBP18.8■□□□□ 0.6
SMARCA2-209ENST00000382203 DAXXQ9UER7 740 aaPredicted RBP18.71■□□□□ 0.59
SMARCA2-209ENST00000382203 SHROOM4Q9ULL8 1493 aa18.6■□□□□ 0.57
SMARCA2-209ENST00000382203 ZEB1P37275 1124 aaPredicted RBP18.53■□□□□ 0.56
SMARCA2-209ENST00000382203 NISCHQ9Y2I1 1504 aa18.53■□□□□ 0.56
SMARCA2-209ENST00000382203 PCGF6Q9BYE7 350 aa18.51■□□□□ 0.55
SMARCA2-209ENST00000382203 RTL5Q5HYW3 569 aaPredicted RBP18.51■□□□□ 0.55
SMARCA2-209ENST00000382203 ZNF316A6NFI3 1004 aaPredicted RBP18.18■□□□□ 0.5
SMARCA2-209ENST00000382203 GLIPR1L2Q4G1C9 344 aa18.13■□□□□ 0.49
SMARCA2-209ENST00000382203 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
SMARCA2-209ENST00000382203 ATP1B4Q9UN42 357 aaPredicted RBP18.09■□□□□ 0.49
SMARCA2-209ENST00000382203 RANGAP1P46060 587 aaPredicted RBP18.05■□□□□ 0.48
SMARCA2-209ENST00000382203 CLSPNQ9HAW4 1339 aa17.86■□□□□ 0.45
SMARCA2-209ENST00000382203 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
SMARCA2-209ENST00000382203 UBTFP17480 764 aaKnown RBP17.75■□□□□ 0.43
SMARCA2-209ENST00000382203 HRCP23327 699 aa17.68■□□□□ 0.42
SMARCA2-209ENST00000382203 MYT1LQ9UL68 1186 aa17.61■□□□□ 0.41
SMARCA2-209ENST00000382203 CDK11AQ9UQ88 783 aaPredicted RBP17.53■□□□□ 0.4
SMARCA2-209ENST00000382203 POLR3GLQ9BT43 218 aa17.51■□□□□ 0.39
SMARCA2-209ENST00000382203 BCANQ96GW7 911 aa17.47■□□□□ 0.39
SMARCA2-209ENST00000382203 GTF3C3Q9Y5Q9 886 aa17.47■□□□□ 0.39
SMARCA2-209ENST00000382203 ANP32BQ92688 251 aaKnown RBP17.47■□□□□ 0.39
SMARCA2-209ENST00000382203 CNGB1Q14028 1251 aaPredicted RBP17.4■□□□□ 0.38
SMARCA2-209ENST00000382203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.4■□□□□ 0.38
SMARCA2-209ENST00000382203 HNRNPUL2Q1KMD3 747 aaKnown RBP17.4■□□□□ 0.38
SMARCA2-209ENST00000382203 ANP32AP39687 249 aaKnown RBP17.36■□□□□ 0.37
SMARCA2-209ENST00000382203 SLC4A1APQ9BWU0 796 aaKnown RBP17.32■□□□□ 0.36
SMARCA2-209ENST00000382203 TNNT2P45379 298 aaPredicted RBP17.31■□□□□ 0.36
SMARCA2-209ENST00000382203 DIEXFQ68CQ4 756 aaKnown RBP17.29■□□□□ 0.36
SMARCA2-209ENST00000382203 TRIM26Q12899 539 aaPredicted RBP17.28■□□□□ 0.36
SMARCA2-209ENST00000382203 ITGAEP38570 1179 aa17.27■□□□□ 0.36
SMARCA2-209ENST00000382203 PPARGC1BQ86YN6 1023 aaKnown RBP17.26■□□□□ 0.35
SMARCA2-209ENST00000382203 ZBTB47Q9UFB7 747 aaPredicted RBP17.25■□□□□ 0.35
SMARCA2-209ENST00000382203 CHIC1Q5VXU3 224 aa17.23■□□□□ 0.35
SMARCA2-209ENST00000382203 CDK11BP21127 795 aaKnown RBP17.18■□□□□ 0.34
SMARCA2-209ENST00000382203 NPM2Q86SE8 214 aaKnown RBP17.15■□□□□ 0.34
SMARCA2-209ENST00000382203 NBR1Q14596 966 aa17.04■□□□□ 0.32
SMARCA2-209ENST00000382203 HSP90AA1P07900 732 aaKnown RBP17.01■□□□□ 0.31
SMARCA2-209ENST00000382203 BCL11AQ9H165 835 aa17■□□□□ 0.31
SMARCA2-209ENST00000382203 ARXQ96QS3 562 aa17■□□□□ 0.31
SMARCA2-209ENST00000382203 ACIN1Q9UKV3 1341 aaKnown RBP16.98■□□□□ 0.31
SMARCA2-209ENST00000382203 TRIM44Q96DX7 344 aaPredicted RBP16.97■□□□□ 0.31
SMARCA2-209ENST00000382203 AMER1Q5JTC6 1135 aaPredicted RBP16.94■□□□□ 0.3
SMARCA2-209ENST00000382203 CANXP27824 592 aaKnown RBP16.93■□□□□ 0.3
SMARCA2-209ENST00000382203 TRIM52Q96A61 297 aa16.87■□□□□ 0.29
SMARCA2-209ENST00000382203 ANP32CO43423 234 aa16.85■□□□□ 0.29
SMARCA2-209ENST00000382203 UPF2Q9HAU5 1272 aaKnown RBP16.84■□□□□ 0.29
SMARCA2-209ENST00000382203 NCLP19338 710 aaKnown RBP16.83■□□□□ 0.29
SMARCA2-209ENST00000382203 FAM50AQ14320 339 aaKnown RBP16.83■□□□□ 0.28
SMARCA2-209ENST00000382203 SLC24A1O60721 1099 aa16.81■□□□□ 0.28
SMARCA2-209ENST00000382203 ERICH6BQ5W0A0 696 aa16.8■□□□□ 0.28
SMARCA2-209ENST00000382203 NAP1L5Q96NT1 182 aaPredicted RBP16.8■□□□□ 0.28
SMARCA2-209ENST00000382203 NEFMP07197 916 aa16.76■□□□□ 0.27
SMARCA2-209ENST00000382203 RTN4Q9NQC3 1192 aaKnown RBP16.73■□□□□ 0.27
SMARCA2-209ENST00000382203 FKBP8Q14318 412 aa16.72■□□□□ 0.27
SMARCA2-209ENST00000382203 NEUROD1Q13562 356 aa16.7■□□□□ 0.26
SMARCA2-209ENST00000382203 ANP32EQ9BTT0 268 aa16.68■□□□□ 0.26
SMARCA2-209ENST00000382203 DNTTIP2Q5QJE6 756 aaKnown RBP16.68■□□□□ 0.26
SMARCA2-209ENST00000382203 ZNF326Q5BKZ1 582 aaKnown RBP16.68■□□□□ 0.26
SMARCA2-209ENST00000382203 LOC105371045A0A1W2PR82 267 aa16.64■□□□□ 0.25
SMARCA2-209ENST00000382203 PTMAP06454 111 aaKnown RBP16.61■□□□□ 0.25
SMARCA2-209ENST00000382203 TNNT3P45378 269 aaPredicted RBP16.56■□□□□ 0.24
SMARCA2-209ENST00000382203 CALRP27797 417 aaKnown RBP16.52■□□□□ 0.24
SMARCA2-209ENST00000382203 CCDC136Q96JN2 1154 aa16.48■□□□□ 0.23
SMARCA2-209ENST00000382203 GOLGA6L22H0YM25 854 aa16.48■□□□□ 0.23
SMARCA2-209ENST00000382203 DDRGK1Q96HY6 314 aa16.44■□□□□ 0.22
SMARCA2-209ENST00000382203 FBLN2P98095 1184 aa16.42■□□□□ 0.22
SMARCA2-209ENST00000382203 BECN1Q14457 450 aa16.42■□□□□ 0.22
SMARCA2-209ENST00000382203 PPM1GO15355 546 aaPredicted RBP16.38■□□□□ 0.21
SMARCA2-209ENST00000382203 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.38■□□□□ 0.21
SMARCA2-209ENST00000382203 ESF1Q9H501 851 aaKnown RBP16.38■□□□□ 0.21
SMARCA2-209ENST00000382203 ARID4BQ4LE39 1312 aaPredicted RBP16.37■□□□□ 0.21
SMARCA2-209ENST00000382203 ZRSR1Q15695 479 aaKnown RBP16.36■□□□□ 0.21
SMARCA2-209ENST00000382203 CHAF1AQ13111 956 aaPredicted RBP16.34■□□□□ 0.21
SMARCA2-209ENST00000382203 SCAF1Q9H7N4 1312 aaKnown RBP16.33■□□□□ 0.2
SMARCA2-209ENST00000382203 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.33■□□□□ 0.2
SMARCA2-209ENST00000382203 HNRNPUQ00839 825 aaKnown RBP eCLIP16.32■□□□□ 0.2
SMARCA2-209ENST00000382203 STAG3Q9UJ98 1225 aa16.29■□□□□ 0.2
SMARCA2-209ENST00000382203 PTMSP20962 102 aa16.27■□□□□ 0.19
SMARCA2-209ENST00000382203 PLCB2Q00722 1185 aa16.27■□□□□ 0.19
SMARCA2-209ENST00000382203 MSNP26038 577 aaKnown RBP16.25■□□□□ 0.19
SMARCA2-209ENST00000382203 DEKP35659 375 aaKnown RBP16.25■□□□□ 0.19
SMARCA2-209ENST00000382203 NRDCO43847 1150 aa16.24■□□□□ 0.19
SMARCA2-209ENST00000382203 ZNF777Q9ULD5 760 aaPredicted RBP16.24■□□□□ 0.19
SMARCA2-209ENST00000382203 GOLGA6L6A8MZA4 724 aa16.24■□□□□ 0.19
SMARCA2-209ENST00000382203 ARID3AQ99856 593 aa16.23■□□□□ 0.19
SMARCA2-209ENST00000382203 VSIG10Q8N0Z9 540 aa16.21■□□□□ 0.19
SMARCA2-209ENST00000382203 LAS1LQ9Y4W2 734 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms