RNA–Protein interactions for RNA: ENST00000380665.3

CDCA2-202, Transcript of cell division cycle associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCA2, Length 3,565 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA2-202ENST00000380665 H0YAA0 97 aa6.82□□□□□ -1.32
CDCA2-202ENST00000380665 RPS29P62273 56 aaKnown RBP6.82□□□□□ -1.32
CDCA2-202ENST00000380665 KRTAP21-3Q3LHN1 58 aa6.8□□□□□ -1.32
CDCA2-202ENST00000380665 XP32Q5T750 250 aa6.79□□□□□ -1.32
CDCA2-202ENST00000380665 RYR3Q15413 4870 aa6.78□□□□□ -1.32
CDCA2-202ENST00000380665 KRTAP10-8P60410 259 aa6.78□□□□□ -1.32
CDCA2-202ENST00000380665 RYR1P21817 5038 aa6.77□□□□□ -1.33
CDCA2-202ENST00000380665 KRTAP10-4P60372 401 aaPredicted RBP6.76□□□□□ -1.33
CDCA2-202ENST00000380665 PKD1P98161 4303 aa6.76□□□□□ -1.33
CDCA2-202ENST00000380665 RPL37P61927 97 aaKnown RBP6.75□□□□□ -1.33
CDCA2-202ENST00000380665 P0C880 135 aa6.69□□□□□ -1.34
CDCA2-202ENST00000380665 RYR2Q92736 4967 aa6.67□□□□□ -1.34
CDCA2-202ENST00000380665 KRTAP4-5Q9BYR2 181 aa6.62□□□□□ -1.35
CDCA2-202ENST00000380665 EPPK1P58107 5090 aaKnown RBP6.62□□□□□ -1.35
CDCA2-202ENST00000380665 C10orf95Q9H7T3 257 aa6.62□□□□□ -1.35
CDCA2-202ENST00000380665 KRTAP17-1Q9BYP8 105 aa6.61□□□□□ -1.35
CDCA2-202ENST00000380665 M0QZ58 72 aa6.58□□□□□ -1.36
CDCA2-202ENST00000380665 KRTAP13-4Q3LI77 160 aa6.56□□□□□ -1.36
CDCA2-202ENST00000380665 LRP2P98164 4655 aa6.56□□□□□ -1.36
CDCA2-202ENST00000380665 R4GN34 69 aa6.56□□□□□ -1.36
CDCA2-202ENST00000380665 ROMO1P60602 79 aa6.54□□□□□ -1.36
CDCA2-202ENST00000380665 MT1HL1P0DM35 61 aa6.53□□□□□ -1.36
CDCA2-202ENST00000380665 HSPG2P98160 4391 aa6.53□□□□□ -1.36
CDCA2-202ENST00000380665 KRTAP25-1Q3LHN0 102 aa6.51□□□□□ -1.37
CDCA2-202ENST00000380665 KRTAP3-3Q9BYR6 98 aa6.47□□□□□ -1.37
CDCA2-202ENST00000380665 KRTAP10-6P60371 365 aaPredicted RBP6.47□□□□□ -1.37
CDCA2-202ENST00000380665 LPAP08519 4548 aa6.45□□□□□ -1.38
CDCA2-202ENST00000380665 SEC61BP60468 96 aaKnown RBP6.45□□□□□ -1.38
CDCA2-202ENST00000380665 PKHD1L1Q86WI1 4243 aa6.42□□□□□ -1.38
CDCA2-202ENST00000380665 KRTAP12-2P59991 146 aa6.41□□□□□ -1.38
CDCA2-202ENST00000380665 CAMK2N1Q7Z7J9 78 aa6.41□□□□□ -1.38
CDCA2-202ENST00000380665 M0R2T5 61 aa6.37□□□□□ -1.39
CDCA2-202ENST00000380665 TPRXLQ17RH7 258 aa6.37□□□□□ -1.39
CDCA2-202ENST00000380665 ABCA13Q86UQ4 5058 aa6.37□□□□□ -1.39
CDCA2-202ENST00000380665 KRTAP3-2Q9BYR7 98 aa6.37□□□□□ -1.39
CDCA2-202ENST00000380665 MUC2Q02817 5179 aa6.36□□□□□ -1.39
CDCA2-202ENST00000380665 HERC2O95714 4834 aa6.33□□□□□ -1.4
CDCA2-202ENST00000380665 KRTAP12-1P59990 96 aa6.25□□□□□ -1.41
CDCA2-202ENST00000380665 TNXBP22105 4242 aa6.24□□□□□ -1.41
CDCA2-202ENST00000380665 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
CDCA2-202ENST00000380665 HERC1Q15751 4861 aa6.22□□□□□ -1.41
CDCA2-202ENST00000380665 LCE2DQ5TA82 110 aaPredicted RBP6.22□□□□□ -1.41
CDCA2-202ENST00000380665 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
CDCA2-202ENST00000380665 RNF213Q63HN8 5207 aa6.19□□□□□ -1.42
CDCA2-202ENST00000380665 KRTAP4-1Q9BYQ7 146 aa6.17□□□□□ -1.42
CDCA2-202ENST00000380665 FAT4Q6V0I7 4981 aa6.06□□□□□ -1.44
CDCA2-202ENST00000380665 PCLOQ9Y6V0 5065 aa6.02□□□□□ -1.44
CDCA2-202ENST00000380665 A0A0A0MQY5 61 aa6.02□□□□□ -1.45
CDCA2-202ENST00000380665 UBR4Q5T4S7 5183 aa6.01□□□□□ -1.45
CDCA2-202ENST00000380665 PLAC4Q8WY50 150 aa5.91□□□□□ -1.46
CDCA2-202ENST00000380665 BIRC6Q9NR09 4857 aa5.9□□□□□ -1.46
CDCA2-202ENST00000380665 KRTAP10-10P60014 251 aa5.9□□□□□ -1.47
CDCA2-202ENST00000380665 LUZP6Q538Z0 58 aa5.88□□□□□ -1.47
CDCA2-202ENST00000380665 TNP1P09430 55 aa5.83□□□□□ -1.48
CDCA2-202ENST00000380665 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
CDCA2-202ENST00000380665 FSIP2Q5CZC0 6907 aa5.77□□□□□ -1.49
CDCA2-202ENST00000380665 HMCN2Q8NDA2 5059 aa5.7□□□□□ -1.5
CDCA2-202ENST00000380665 MUC17Q685J3 4493 aa5.66□□□□□ -1.5
CDCA2-202ENST00000380665 PP632Q6XCG6 107 aa5.59□□□□□ -1.52
CDCA2-202ENST00000380665 KRTAP19-2Q3LHN2 52 aa5.56□□□□□ -1.52
CDCA2-202ENST00000380665 FLGP20930 4061 aaPredicted RBP5.51□□□□□ -1.53
CDCA2-202ENST00000380665 MT1HP80294 61 aa5.51□□□□□ -1.53
CDCA2-202ENST00000380665 USH2AO75445 5202 aa5.49□□□□□ -1.53
CDCA2-202ENST00000380665 MT1FP04733 61 aa5.48□□□□□ -1.53
CDCA2-202ENST00000380665 LCE3AQ5TA76 89 aa5.45□□□□□ -1.54
CDCA2-202ENST00000380665 LCE2CQ5TA81 110 aa5.45□□□□□ -1.54
CDCA2-202ENST00000380665 MT2AP02795 61 aa5.44□□□□□ -1.54
CDCA2-202ENST00000380665 KRTAP19-1Q8IUB9 90 aa5.41□□□□□ -1.54
CDCA2-202ENST00000380665 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
CDCA2-202ENST00000380665 KRTAP10-12P60413 245 aa5.25□□□□□ -1.57
CDCA2-202ENST00000380665 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
CDCA2-202ENST00000380665 KMT2DO14686 5537 aa5.23□□□□□ -1.57
CDCA2-202ENST00000380665 PRO2289Q9P1D8 64 aa5.22□□□□□ -1.57
CDCA2-202ENST00000380665 KRTAP12-3P60328 96 aa5.19□□□□□ -1.58
CDCA2-202ENST00000380665 KRTAP10-7P60409 375 aaPredicted RBP5.16□□□□□ -1.58
CDCA2-202ENST00000380665 MT1BP07438 61 aa5.14□□□□□ -1.59
CDCA2-202ENST00000380665 LCE2BO14633 110 aa5.1□□□□□ -1.59
CDCA2-202ENST00000380665 MT1XP80297 61 aa5.1□□□□□ -1.59
CDCA2-202ENST00000380665 KRTAP10-5P60370 271 aa5.09□□□□□ -1.6
CDCA2-202ENST00000380665 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
CDCA2-202ENST00000380665 KRTAP4-8Q9BYQ9 185 aa5.04□□□□□ -1.6
CDCA2-202ENST00000380665 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
CDCA2-202ENST00000380665 KRTAP19-8Q3LI54 63 aa5□□□□□ -1.61
CDCA2-202ENST00000380665 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
CDCA2-202ENST00000380665 KRTAP19-5Q3LI72 72 aa4.97□□□□□ -1.61
CDCA2-202ENST00000380665 OBSCNQ5VST9 7968 aa4.96□□□□□ -1.62
CDCA2-202ENST00000380665 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.62
CDCA2-202ENST00000380665 KRTAP8-1Q8IUC2 63 aa4.95□□□□□ -1.62
CDCA2-202ENST00000380665 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
CDCA2-202ENST00000380665 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
CDCA2-202ENST00000380665 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
CDCA2-202ENST00000380665 LCE2AQ5TA79 106 aaPredicted RBP4.83□□□□□ -1.64
CDCA2-202ENST00000380665 FCGBPQ9Y6R7 5405 aaPredicted RBP4.8□□□□□ -1.64
CDCA2-202ENST00000380665 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
CDCA2-202ENST00000380665 SSPOA2VEC9 5147 aa4.71□□□□□ -1.65
CDCA2-202ENST00000380665 MUC12Q9UKN1 5478 aa4.71□□□□□ -1.66
CDCA2-202ENST00000380665 LCE3CQ5T5A8 94 aa4.71□□□□□ -1.66
CDCA2-202ENST00000380665 INE1O15225 51 aa4.59□□□□□ -1.68
CDCA2-202ENST00000380665 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
CDCA2-202ENST00000380665 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms