RNA–Protein interactions for RNA: ENST00000378863.8

CRLS1-201, Transcript of cardiolipin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLS1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLS1-201ENST00000378863 FAT3Q8TDW7 4589 aa7.65□□□□□ -1.19
CRLS1-201ENST00000378863 KRTAP10-4P60372 401 aaPredicted RBP7.63□□□□□ -1.19
CRLS1-201ENST00000378863 KRTAP3-1Q9BYR8 98 aa7.61□□□□□ -1.19
CRLS1-201ENST00000378863 RYR1P21817 5038 aa7.61□□□□□ -1.19
CRLS1-201ENST00000378863 SACSQ9NZJ4 4579 aa7.6□□□□□ -1.19
CRLS1-201ENST00000378863 SEC61BP60468 96 aaKnown RBP7.6□□□□□ -1.19
CRLS1-201ENST00000378863 KRTAP4-5Q9BYR2 181 aa7.6□□□□□ -1.19
CRLS1-201ENST00000378863 R4GN34 69 aa7.58□□□□□ -1.2
CRLS1-201ENST00000378863 APOBP04114 4563 aaKnown RBP7.57□□□□□ -1.2
CRLS1-201ENST00000378863 ROMO1P60602 79 aa7.56□□□□□ -1.2
CRLS1-201ENST00000378863 RYR3Q15413 4870 aa7.56□□□□□ -1.2
CRLS1-201ENST00000378863 M0QZ58 72 aa7.55□□□□□ -1.2
CRLS1-201ENST00000378863 M0R2T5 61 aa7.55□□□□□ -1.2
CRLS1-201ENST00000378863 ALMS1Q8TCU4 4167 aa7.52□□□□□ -1.2
CRLS1-201ENST00000378863 P0C880 135 aa7.51□□□□□ -1.21
CRLS1-201ENST00000378863 KRTAP25-1Q3LHN0 102 aa7.49□□□□□ -1.21
CRLS1-201ENST00000378863 CAMK2N1Q7Z7J9 78 aa7.46□□□□□ -1.21
CRLS1-201ENST00000378863 MT1HL1P0DM35 61 aa7.45□□□□□ -1.22
CRLS1-201ENST00000378863 C10orf95Q9H7T3 257 aa7.45□□□□□ -1.22
CRLS1-201ENST00000378863 FAT2Q9NYQ8 4349 aa7.44□□□□□ -1.22
CRLS1-201ENST00000378863 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
CRLS1-201ENST00000378863 KRTAP17-1Q9BYP8 105 aa7.38□□□□□ -1.23
CRLS1-201ENST00000378863 RYR2Q92736 4967 aa7.37□□□□□ -1.23
CRLS1-201ENST00000378863 PKD1P98161 4303 aa7.33□□□□□ -1.24
CRLS1-201ENST00000378863 NDUFAF8A1L188 74 aa7.31□□□□□ -1.24
CRLS1-201ENST00000378863 KRTAP13-4Q3LI77 160 aa7.3□□□□□ -1.24
CRLS1-201ENST00000378863 A0A0A0MQY5 61 aa7.24□□□□□ -1.25
CRLS1-201ENST00000378863 LRP2P98164 4655 aa7.24□□□□□ -1.25
CRLS1-201ENST00000378863 KRTAP10-6P60371 365 aaPredicted RBP7.24□□□□□ -1.25
CRLS1-201ENST00000378863 KRTAP12-2P59991 146 aa7.2□□□□□ -1.26
CRLS1-201ENST00000378863 KRTAP3-3Q9BYR6 98 aa7.18□□□□□ -1.26
CRLS1-201ENST00000378863 EPPK1P58107 5090 aaKnown RBP7.16□□□□□ -1.26
CRLS1-201ENST00000378863 HSPG2P98160 4391 aa7.13□□□□□ -1.27
CRLS1-201ENST00000378863 KRTAP3-2Q9BYR7 98 aa7.1□□□□□ -1.27
CRLS1-201ENST00000378863 HERC2O95714 4834 aa7.09□□□□□ -1.27
CRLS1-201ENST00000378863 LUZP6Q538Z0 58 aa7.07□□□□□ -1.28
CRLS1-201ENST00000378863 KRTAP12-1P59990 96 aa7.06□□□□□ -1.28
CRLS1-201ENST00000378863 LPAP08519 4548 aa7.05□□□□□ -1.28
CRLS1-201ENST00000378863 KRTAP4-1Q9BYQ7 146 aa6.94□□□□□ -1.3
CRLS1-201ENST00000378863 PKHD1L1Q86WI1 4243 aa6.91□□□□□ -1.3
CRLS1-201ENST00000378863 PLAC4Q8WY50 150 aa6.91□□□□□ -1.3
CRLS1-201ENST00000378863 LORP23490 312 aaPredicted RBP6.89□□□□□ -1.31
CRLS1-201ENST00000378863 KRTAP10-10P60014 251 aa6.89□□□□□ -1.31
CRLS1-201ENST00000378863 ABCA13Q86UQ4 5058 aa6.88□□□□□ -1.31
CRLS1-201ENST00000378863 MUC2Q02817 5179 aa6.87□□□□□ -1.31
CRLS1-201ENST00000378863 TNP1P09430 55 aa6.79□□□□□ -1.32
CRLS1-201ENST00000378863 TNXBP22105 4242 aa6.77□□□□□ -1.33
CRLS1-201ENST00000378863 HERC1Q15751 4861 aa6.75□□□□□ -1.33
CRLS1-201ENST00000378863 RNF213Q63HN8 5207 aa6.7□□□□□ -1.34
CRLS1-201ENST00000378863 PCLOQ9Y6V0 5065 aa6.65□□□□□ -1.34
CRLS1-201ENST00000378863 BIRC6Q9NR09 4857 aa6.6□□□□□ -1.35
CRLS1-201ENST00000378863 FAT4Q6V0I7 4981 aa6.6□□□□□ -1.35
CRLS1-201ENST00000378863 PP632Q6XCG6 107 aa6.56□□□□□ -1.36
CRLS1-201ENST00000378863 UBR4Q5T4S7 5183 aa6.5□□□□□ -1.37
CRLS1-201ENST00000378863 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
CRLS1-201ENST00000378863 MT1HP80294 61 aa6.32□□□□□ -1.4
CRLS1-201ENST00000378863 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
CRLS1-201ENST00000378863 MT1FP04733 61 aa6.23□□□□□ -1.41
CRLS1-201ENST00000378863 MT2AP02795 61 aa6.21□□□□□ -1.41
CRLS1-201ENST00000378863 HMCN2Q8NDA2 5059 aa6.2□□□□□ -1.42
CRLS1-201ENST00000378863 MUC17Q685J3 4493 aa6.18□□□□□ -1.42
CRLS1-201ENST00000378863 PRO2289Q9P1D8 64 aa6.16□□□□□ -1.42
CRLS1-201ENST00000378863 KRTAP19-2Q3LHN2 52 aa6.16□□□□□ -1.42
CRLS1-201ENST00000378863 LCE2CQ5TA81 110 aa6.15□□□□□ -1.43
CRLS1-201ENST00000378863 LCE3AQ5TA76 89 aa6.12□□□□□ -1.43
CRLS1-201ENST00000378863 FLGP20930 4061 aaPredicted RBP6.11□□□□□ -1.43
CRLS1-201ENST00000378863 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
CRLS1-201ENST00000378863 SPRR2GQ9BYE4 73 aa6.02□□□□□ -1.45
CRLS1-201ENST00000378863 KRTAP10-12P60413 245 aa6□□□□□ -1.45
CRLS1-201ENST00000378863 KRTAP9-8Q9BYQ0 159 aa5.95□□□□□ -1.46
CRLS1-201ENST00000378863 USH2AO75445 5202 aa5.94□□□□□ -1.46
CRLS1-201ENST00000378863 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
CRLS1-201ENST00000378863 MT1BP07438 61 aa5.79□□□□□ -1.48
CRLS1-201ENST00000378863 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
CRLS1-201ENST00000378863 KRTAP23-1A1A580 65 aa5.78□□□□□ -1.48
CRLS1-201ENST00000378863 MT1XP80297 61 aa5.73□□□□□ -1.49
CRLS1-201ENST00000378863 CRCT1Q9UGL9 99 aa5.7□□□□□ -1.5
CRLS1-201ENST00000378863 KRTAP10-5P60370 271 aa5.7□□□□□ -1.5
CRLS1-201ENST00000378863 KRTAP9-3Q9BYQ3 159 aa5.7□□□□□ -1.5
CRLS1-201ENST00000378863 KRTAP19-8Q3LI54 63 aa5.68□□□□□ -1.5
CRLS1-201ENST00000378863 KMT2DO14686 5537 aa5.67□□□□□ -1.5
CRLS1-201ENST00000378863 KRTAP4-8A0A0G2JLE6 195 aa5.66□□□□□ -1.5
CRLS1-201ENST00000378863 KRTAP4-8Q9BYQ9 185 aa5.66□□□□□ -1.5
CRLS1-201ENST00000378863 LCE2BO14633 110 aa5.64□□□□□ -1.51
CRLS1-201ENST00000378863 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
CRLS1-201ENST00000378863 KRTAP8-1Q8IUC2 63 aa5.6□□□□□ -1.51
CRLS1-201ENST00000378863 OBSCNQ5VST9 7968 aa5.55□□□□□ -1.52
CRLS1-201ENST00000378863 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
CRLS1-201ENST00000378863 SYNE1Q8NF91 8797 aaKnown RBP5.41□□□□□ -1.54
CRLS1-201ENST00000378863 SPRR5A0A1B0GTR4 108 aa5.39□□□□□ -1.55
CRLS1-201ENST00000378863 LCE2AQ5TA79 106 aaPredicted RBP5.38□□□□□ -1.55
CRLS1-201ENST00000378863 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
CRLS1-201ENST00000378863 LCE3CQ5T5A8 94 aa5.34□□□□□ -1.55
CRLS1-201ENST00000378863 FCGBPQ9Y6R7 5405 aaPredicted RBP5.34□□□□□ -1.56
CRLS1-201ENST00000378863 INE1O15225 51 aa5.3□□□□□ -1.56
CRLS1-201ENST00000378863 SPRR2FQ96RM1 72 aa5.28□□□□□ -1.56
CRLS1-201ENST00000378863 MUC12Q9UKN1 5478 aa5.19□□□□□ -1.58
CRLS1-201ENST00000378863 SSPOA2VEC9 5147 aa5.16□□□□□ -1.58
CRLS1-201ENST00000378863 MT1GP13640 62 aa5.08□□□□□ -1.6
CRLS1-201ENST00000378863 KRTAP4-3Q9BYR4 195 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms