RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 HYDINQ4G0P3 5121 aa9.08□□□□□ -0.96
TRAF3IP1-201ENST00000373327 DYNC2H1Q8NCM8 4307 aaKnown RBP9.08□□□□□ -0.96
TRAF3IP1-201ENST00000373327 LUZP6Q538Z0 58 aa9.07□□□□□ -0.96
TRAF3IP1-201ENST00000373327 MYCBP2O75592 4640 aa9.07□□□□□ -0.96
TRAF3IP1-201ENST00000373327 KRTAP25-1Q3LHN0 102 aa9.03□□□□□ -0.96
TRAF3IP1-201ENST00000373327 C10orf95Q9H7T3 257 aa9.01□□□□□ -0.97
TRAF3IP1-201ENST00000373327 KRTAP10-4P60372 401 aaPredicted RBP9□□□□□ -0.97
TRAF3IP1-201ENST00000373327 PKHD1P08F94 4074 aa8.98□□□□□ -0.97
TRAF3IP1-201ENST00000373327 M0R2T5 61 aa8.97□□□□□ -0.97
TRAF3IP1-201ENST00000373327 LRP1Q07954 4544 aaKnown RBP8.88□□□□□ -0.99
TRAF3IP1-201ENST00000373327 ALMS1Q8TCU4 4167 aa8.85□□□□□ -0.99
TRAF3IP1-201ENST00000373327 KIAA1109Q2LD37 5005 aa8.84□□□□□ -0.99
TRAF3IP1-201ENST00000373327 FAT3Q8TDW7 4589 aa8.83□□□□□ -1
TRAF3IP1-201ENST00000373327 KRTAP13-4Q3LI77 160 aa8.82□□□□□ -1
TRAF3IP1-201ENST00000373327 SACSQ9NZJ4 4579 aa8.81□□□□□ -1
TRAF3IP1-201ENST00000373327 TPRXLQ17RH7 258 aa8.8□□□□□ -1
TRAF3IP1-201ENST00000373327 KRTAP4-5Q9BYR2 181 aa8.78□□□□□ -1
TRAF3IP1-201ENST00000373327 APOBP04114 4563 aaKnown RBP8.78□□□□□ -1
TRAF3IP1-201ENST00000373327 RYR1P21817 5038 aa8.78□□□□□ -1
TRAF3IP1-201ENST00000373327 MT1HL1P0DM35 61 aa8.77□□□□□ -1.01
TRAF3IP1-201ENST00000373327 NDUFAF8A1L188 74 aa8.76□□□□□ -1.01
TRAF3IP1-201ENST00000373327 KRTAP10-6P60371 365 aaPredicted RBP8.74□□□□□ -1.01
TRAF3IP1-201ENST00000373327 KRTAP12-2P59991 146 aa8.71□□□□□ -1.01
TRAF3IP1-201ENST00000373327 FAT2Q9NYQ8 4349 aa8.7□□□□□ -1.02
TRAF3IP1-201ENST00000373327 KRTAP3-3Q9BYR6 98 aa8.68□□□□□ -1.02
TRAF3IP1-201ENST00000373327 KMT2CQ8NEZ4 4911 aaKnown RBP8.66□□□□□ -1.02
TRAF3IP1-201ENST00000373327 RYR3Q15413 4870 aa8.65□□□□□ -1.02
TRAF3IP1-201ENST00000373327 A0A0A0MQY5 61 aa8.63□□□□□ -1.03
TRAF3IP1-201ENST00000373327 KRTAP3-2Q9BYR7 98 aa8.57□□□□□ -1.04
TRAF3IP1-201ENST00000373327 PKD1P98161 4303 aa8.55□□□□□ -1.04
TRAF3IP1-201ENST00000373327 KRTAP12-1P59990 96 aa8.53□□□□□ -1.04
TRAF3IP1-201ENST00000373327 KRTAP17-1Q9BYP8 105 aa8.53□□□□□ -1.04
TRAF3IP1-201ENST00000373327 RYR2Q92736 4967 aa8.48□□□□□ -1.05
TRAF3IP1-201ENST00000373327 LRP2P98164 4655 aa8.42□□□□□ -1.06
TRAF3IP1-201ENST00000373327 PLAC4Q8WY50 150 aa8.38□□□□□ -1.07
TRAF3IP1-201ENST00000373327 LORP23490 312 aaPredicted RBP8.28□□□□□ -1.08
TRAF3IP1-201ENST00000373327 HSPG2P98160 4391 aa8.26□□□□□ -1.09
TRAF3IP1-201ENST00000373327 TNP1P09430 55 aa8.22□□□□□ -1.09
TRAF3IP1-201ENST00000373327 LPAP08519 4548 aa8.2□□□□□ -1.1
TRAF3IP1-201ENST00000373327 KRTAP10-10P60014 251 aa8.19□□□□□ -1.1
TRAF3IP1-201ENST00000373327 KRTAP4-1Q9BYQ7 146 aa8.18□□□□□ -1.1
TRAF3IP1-201ENST00000373327 PKHD1L1Q86WI1 4243 aa8.1□□□□□ -1.11
TRAF3IP1-201ENST00000373327 EPPK1P58107 5090 aaKnown RBP8.1□□□□□ -1.11
TRAF3IP1-201ENST00000373327 HERC2O95714 4834 aa8.08□□□□□ -1.12
TRAF3IP1-201ENST00000373327 TNXBP22105 4242 aa7.95□□□□□ -1.14
TRAF3IP1-201ENST00000373327 PP632Q6XCG6 107 aa7.93□□□□□ -1.14
TRAF3IP1-201ENST00000373327 ABCA13Q86UQ4 5058 aa7.91□□□□□ -1.14
TRAF3IP1-201ENST00000373327 MUC2Q02817 5179 aa7.82□□□□□ -1.16
TRAF3IP1-201ENST00000373327 KRTAP15-1Q3LI76 137 aa7.8□□□□□ -1.16
TRAF3IP1-201ENST00000373327 HERC1Q15751 4861 aa7.62□□□□□ -1.19
TRAF3IP1-201ENST00000373327 RNF213Q63HN8 5207 aa7.57□□□□□ -1.2
TRAF3IP1-201ENST00000373327 FAT4Q6V0I7 4981 aa7.53□□□□□ -1.2
TRAF3IP1-201ENST00000373327 BIRC6Q9NR09 4857 aa7.48□□□□□ -1.21
TRAF3IP1-201ENST00000373327 PCLOQ9Y6V0 5065 aa7.46□□□□□ -1.22
TRAF3IP1-201ENST00000373327 MT1HP80294 61 aa7.43□□□□□ -1.22
TRAF3IP1-201ENST00000373327 LCE3AQ5TA76 89 aa7.43□□□□□ -1.22
TRAF3IP1-201ENST00000373327 PRO2289Q9P1D8 64 aa7.43□□□□□ -1.22
TRAF3IP1-201ENST00000373327 MT1FP04733 61 aa7.35□□□□□ -1.23
TRAF3IP1-201ENST00000373327 MT2AP02795 61 aa7.35□□□□□ -1.23
TRAF3IP1-201ENST00000373327 UBR4Q5T4S7 5183 aa7.34□□□□□ -1.23
TRAF3IP1-201ENST00000373327 MUC17Q685J3 4493 aa7.28□□□□□ -1.24
TRAF3IP1-201ENST00000373327 KRTAP10-12P60413 245 aa7.27□□□□□ -1.25
TRAF3IP1-201ENST00000373327 KRTAP19-2Q3LHN2 52 aa7.27□□□□□ -1.25
TRAF3IP1-201ENST00000373327 KRTAP19-1Q8IUB9 90 aa7.23□□□□□ -1.25
TRAF3IP1-201ENST00000373327 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
TRAF3IP1-201ENST00000373327 FLGP20930 4061 aaPredicted RBP7.2□□□□□ -1.26
TRAF3IP1-201ENST00000373327 LCE2CQ5TA81 110 aa7.2□□□□□ -1.26
TRAF3IP1-201ENST00000373327 KRTAP12-3P60328 96 aa7.16□□□□□ -1.26
TRAF3IP1-201ENST00000373327 FSIP2Q5CZC0 6907 aa7.11□□□□□ -1.27
TRAF3IP1-201ENST00000373327 HMCN2Q8NDA2 5059 aa7.07□□□□□ -1.28
TRAF3IP1-201ENST00000373327 KRTAP9-8Q9BYQ0 159 aa6.99□□□□□ -1.29
TRAF3IP1-201ENST00000373327 KRTAP23-1A1A580 65 aa6.97□□□□□ -1.29
TRAF3IP1-201ENST00000373327 KRTAP10-7P60409 375 aaPredicted RBP6.91□□□□□ -1.3
TRAF3IP1-201ENST00000373327 MT1BP07438 61 aa6.87□□□□□ -1.31
TRAF3IP1-201ENST00000373327 MT1XP80297 61 aa6.85□□□□□ -1.31
TRAF3IP1-201ENST00000373327 CRCT1Q9UGL9 99 aa6.84□□□□□ -1.31
TRAF3IP1-201ENST00000373327 KRTAP10-5P60370 271 aa6.82□□□□□ -1.32
TRAF3IP1-201ENST00000373327 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
TRAF3IP1-201ENST00000373327 KRTAP8-1Q8IUC2 63 aa6.76□□□□□ -1.33
TRAF3IP1-201ENST00000373327 KRTAP19-5Q3LI72 72 aa6.76□□□□□ -1.33
TRAF3IP1-201ENST00000373327 USH2AO75445 5202 aa6.74□□□□□ -1.33
TRAF3IP1-201ENST00000373327 KRTAP4-8A0A0G2JLE6 195 aa6.7□□□□□ -1.34
TRAF3IP1-201ENST00000373327 KRTAP9-3Q9BYQ3 159 aa6.7□□□□□ -1.34
TRAF3IP1-201ENST00000373327 KRTAP4-8Q9BYQ9 185 aa6.7□□□□□ -1.34
TRAF3IP1-201ENST00000373327 LCE2BO14633 110 aa6.59□□□□□ -1.35
TRAF3IP1-201ENST00000373327 KMT2DO14686 5537 aa6.56□□□□□ -1.36
TRAF3IP1-201ENST00000373327 INE1O15225 51 aa6.56□□□□□ -1.36
TRAF3IP1-201ENST00000373327 SPRR5A0A1B0GTR4 108 aa6.48□□□□□ -1.37
TRAF3IP1-201ENST00000373327 LCE3CQ5T5A8 94 aa6.47□□□□□ -1.37
TRAF3IP1-201ENST00000373327 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
TRAF3IP1-201ENST00000373327 OBSCNQ5VST9 7968 aa6.34□□□□□ -1.4
TRAF3IP1-201ENST00000373327 DSTQ03001 7570 aaKnown RBP6.3□□□□□ -1.4
TRAF3IP1-201ENST00000373327 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
TRAF3IP1-201ENST00000373327 SPRR2FQ96RM1 72 aa6.2□□□□□ -1.42
TRAF3IP1-201ENST00000373327 LCE2AQ5TA79 106 aaPredicted RBP6.16□□□□□ -1.42
TRAF3IP1-201ENST00000373327 FCGBPQ9Y6R7 5405 aaPredicted RBP6.16□□□□□ -1.42
TRAF3IP1-201ENST00000373327 MT1GP13640 62 aa6.1□□□□□ -1.43
TRAF3IP1-201ENST00000373327 KRTAP4-3Q9BYR4 195 aa6.02□□□□□ -1.45
TRAF3IP1-201ENST00000373327 KRTAP19-7Q3SYF9 63 aa5.99□□□□□ -1.45
TRAF3IP1-201ENST00000373327 MT1LQ93083 61 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms