RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 NISCHQ9Y2I1 1504 aa33.52■■■□□ 2.96
TRAF3IP1-201ENST00000373327 DCAF8L2P0C7V8 631 aa31.52■■■□□ 2.64
TRAF3IP1-201ENST00000373327 SHROOM4Q9ULL8 1493 aa31.07■■■□□ 2.56
TRAF3IP1-201ENST00000373327 SUPT5HO00267 1087 aaKnown RBP30.87■■■□□ 2.53
TRAF3IP1-201ENST00000373327 EHMT2Q96KQ7 1210 aa29.45■■■□□ 2.31
TRAF3IP1-201ENST00000373327 FAM9AQ8IZU1 332 aaPredicted RBP28.93■■■□□ 2.22
TRAF3IP1-201ENST00000373327 PCGF6Q9BYE7 350 aa28.9■■■□□ 2.22
TRAF3IP1-201ENST00000373327 CHIC1Q5VXU3 224 aa28.6■■■□□ 2.17
TRAF3IP1-201ENST00000373327 LOC105371045A0A1W2PR82 267 aa28.51■■■□□ 2.15
TRAF3IP1-201ENST00000373327 TTBK1Q5TCY1 1321 aaPredicted RBP28.37■■■□□ 2.13
TRAF3IP1-201ENST00000373327 TRIM41Q8WV44 630 aa28.32■■■□□ 2.12
TRAF3IP1-201ENST00000373327 PPARGC1BQ86YN6 1023 aaKnown RBP28.17■■■□□ 2.1
TRAF3IP1-201ENST00000373327 ZCCHC6Q5VYS8 1495 aaKnown RBP28.02■■■□□ 2.08
TRAF3IP1-201ENST00000373327 ABCC9O60706 1549 aa27.87■■■□□ 2.05
TRAF3IP1-201ENST00000373327 HRCP23327 699 aa27.87■■■□□ 2.05
TRAF3IP1-201ENST00000373327 RANGAP1P46060 587 aaPredicted RBP27.85■■■□□ 2.05
TRAF3IP1-201ENST00000373327 MYO15BQ96JP2 1530 aa27.64■■■□□ 2.01
TRAF3IP1-201ENST00000373327 TRIM26Q12899 539 aaPredicted RBP27.58■■■□□ 2.01
TRAF3IP1-201ENST00000373327 CCDC180Q9P1Z9 1646 aa27.51■■■□□ 2
TRAF3IP1-201ENST00000373327 UBTFP17480 764 aaKnown RBP27.5■■□□□ 1.99
TRAF3IP1-201ENST00000373327 CCER1Q8TC90 406 aaPredicted RBP27.43■■□□□ 1.98
TRAF3IP1-201ENST00000373327 PABPN1Q86U42 306 aaKnown RBP eCLIP27.41■■□□□ 1.98
TRAF3IP1-201ENST00000373327 SCRIBQ14160 1630 aa27.39■■□□□ 1.97
TRAF3IP1-201ENST00000373327 APLP2Q06481 763 aa27.27■■□□□ 1.96
TRAF3IP1-201ENST00000373327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.14■■□□□ 1.94
TRAF3IP1-201ENST00000373327 ZEB1P37275 1124 aaPredicted RBP27.11■■□□□ 1.93
TRAF3IP1-201ENST00000373327 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
TRAF3IP1-201ENST00000373327 HNRNPUL2Q1KMD3 747 aaKnown RBP26.9■■□□□ 1.9
TRAF3IP1-201ENST00000373327 ATP1B4Q9UN42 357 aaPredicted RBP26.87■■□□□ 1.89
TRAF3IP1-201ENST00000373327 YTHDC1Q96MU7 727 aaKnown RBP26.82■■□□□ 1.88
TRAF3IP1-201ENST00000373327 ITGAEP38570 1179 aa26.69■■□□□ 1.86
TRAF3IP1-201ENST00000373327 CECR2Q9BXF3 1484 aa26.68■■□□□ 1.86
TRAF3IP1-201ENST00000373327 DCAF1Q9Y4B6 1507 aa26.67■■□□□ 1.86
TRAF3IP1-201ENST00000373327 CSRNP3Q8WYN3 585 aa26.47■■□□□ 1.83
TRAF3IP1-201ENST00000373327 RB1CC1Q8TDY2 1594 aa26.46■■□□□ 1.83
TRAF3IP1-201ENST00000373327 CENPBP07199 599 aaPredicted RBP26.44■■□□□ 1.82
TRAF3IP1-201ENST00000373327 DIEXFQ68CQ4 756 aaKnown RBP26.36■■□□□ 1.81
TRAF3IP1-201ENST00000373327 MROH2BQ7Z745 1585 aa26.3■■□□□ 1.8
TRAF3IP1-201ENST00000373327 NACADO15069 1562 aa26.17■■□□□ 1.78
TRAF3IP1-201ENST00000373327 P3H3Q8IVL6 736 aa26.07■■□□□ 1.76
TRAF3IP1-201ENST00000373327 WIZO95785 1651 aa26.05■■□□□ 1.76
TRAF3IP1-201ENST00000373327 ABCC8Q09428 1581 aa26■■□□□ 1.75
TRAF3IP1-201ENST00000373327 SOGA1O94964 1423 aa25.99■■□□□ 1.75
TRAF3IP1-201ENST00000373327 FAM50AQ14320 339 aaKnown RBP25.96■■□□□ 1.75
TRAF3IP1-201ENST00000373327 GTF3C3Q9Y5Q9 886 aa25.94■■□□□ 1.74
TRAF3IP1-201ENST00000373327 CEP162Q5TB80 1403 aa25.94■■□□□ 1.74
TRAF3IP1-201ENST00000373327 CCDC88BA6NC98 1476 aa25.89■■□□□ 1.73
TRAF3IP1-201ENST00000373327 BAZ1AQ9NRL2 1556 aaPredicted RBP25.87■■□□□ 1.73
TRAF3IP1-201ENST00000373327 ZNF316A6NFI3 1004 aaPredicted RBP25.86■■□□□ 1.73
TRAF3IP1-201ENST00000373327 NEUROD1Q13562 356 aa25.86■■□□□ 1.73
TRAF3IP1-201ENST00000373327 WRNQ14191 1432 aaPredicted RBP eCLIP25.78■■□□□ 1.72
TRAF3IP1-201ENST00000373327 SCAF1Q9H7N4 1312 aaKnown RBP25.77■■□□□ 1.72
TRAF3IP1-201ENST00000373327 CNGB1Q14028 1251 aaPredicted RBP25.76■■□□□ 1.71
TRAF3IP1-201ENST00000373327 ARID3CA6NKF2 412 aa25.76■■□□□ 1.71
TRAF3IP1-201ENST00000373327 ACIN1Q9UKV3 1341 aaKnown RBP25.73■■□□□ 1.71
TRAF3IP1-201ENST00000373327 CLIP1P30622 1438 aa25.72■■□□□ 1.71
TRAF3IP1-201ENST00000373327 PELP1Q8IZL8 1130 aaKnown RBP25.66■■□□□ 1.7
TRAF3IP1-201ENST00000373327 RUSC2Q8N2Y8 1516 aa25.66■■□□□ 1.7
TRAF3IP1-201ENST00000373327 TNIKQ9UKE5 1360 aa25.62■■□□□ 1.69
TRAF3IP1-201ENST00000373327 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
TRAF3IP1-201ENST00000373327 GOLGA3Q08378 1498 aa25.59■■□□□ 1.69
TRAF3IP1-201ENST00000373327 MIER1Q8N108 512 aa25.55■■□□□ 1.68
TRAF3IP1-201ENST00000373327 POLR3GLQ9BT43 218 aa25.53■■□□□ 1.68
TRAF3IP1-201ENST00000373327 BCANQ96GW7 911 aa25.44■■□□□ 1.66
TRAF3IP1-201ENST00000373327 HIRIP3Q9BW71 556 aaPredicted RBP25.43■■□□□ 1.66
TRAF3IP1-201ENST00000373327 EEA1Q15075 1411 aa25.42■■□□□ 1.66
TRAF3IP1-201ENST00000373327 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
TRAF3IP1-201ENST00000373327 TRIM52Q96A61 297 aa25.41■■□□□ 1.66
TRAF3IP1-201ENST00000373327 SMARCA4P51532 1647 aa25.37■■□□□ 1.65
TRAF3IP1-201ENST00000373327 CEP164Q9UPV0 1460 aa25.36■■□□□ 1.65
TRAF3IP1-201ENST00000373327 NEFLP07196 543 aa25.34■■□□□ 1.65
TRAF3IP1-201ENST00000373327 KANK4Q5T7N3 995 aaPredicted RBP25.33■■□□□ 1.65
TRAF3IP1-201ENST00000373327 FBLN2P98095 1184 aa25.33■■□□□ 1.64
TRAF3IP1-201ENST00000373327 DDX10Q13206 875 aaKnown RBP25.25■■□□□ 1.63
TRAF3IP1-201ENST00000373327 SMARCA2P51531 1590 aa25.23■■□□□ 1.63
TRAF3IP1-201ENST00000373327 CHIC2Q9UKJ5 165 aa25.23■■□□□ 1.63
TRAF3IP1-201ENST00000373327 RAPGEF2Q9Y4G8 1499 aa25.19■■□□□ 1.62
TRAF3IP1-201ENST00000373327 ZNF326Q5BKZ1 582 aaKnown RBP25.17■■□□□ 1.62
TRAF3IP1-201ENST00000373327 ATAD2BQ9ULI0 1458 aa25.15■■□□□ 1.62
TRAF3IP1-201ENST00000373327 KIF27Q86VH2 1401 aa25.14■■□□□ 1.62
TRAF3IP1-201ENST00000373327 SIN3AQ96ST3 1273 aa25.12■■□□□ 1.61
TRAF3IP1-201ENST00000373327 VPS8Q8N3P4 1428 aa25.11■■□□□ 1.61
TRAF3IP1-201ENST00000373327 ZNF777Q9ULD5 760 aaPredicted RBP25.05■■□□□ 1.6
TRAF3IP1-201ENST00000373327 CUX2O14529 1486 aa25.03■■□□□ 1.6
TRAF3IP1-201ENST00000373327 ANP32CO43423 234 aa25.02■■□□□ 1.6
TRAF3IP1-201ENST00000373327 RRP7BPQ9NSQ0 103 aa24.98■■□□□ 1.59
TRAF3IP1-201ENST00000373327 MTUS2Q5JR59 1369 aa24.94■■□□□ 1.58
TRAF3IP1-201ENST00000373327 MYT1LQ9UL68 1186 aa24.93■■□□□ 1.58
TRAF3IP1-201ENST00000373327 CARMIL1Q5VZK9 1371 aa24.92■■□□□ 1.58
TRAF3IP1-201ENST00000373327 TONSLQ96HA7 1378 aa24.91■■□□□ 1.58
TRAF3IP1-201ENST00000373327 CCNB3Q8WWL7 1395 aa24.89■■□□□ 1.57
TRAF3IP1-201ENST00000373327 ERICH6Q7L0X2 663 aa24.88■■□□□ 1.57
TRAF3IP1-201ENST00000373327 FKBP8Q14318 412 aa24.85■■□□□ 1.57
TRAF3IP1-201ENST00000373327 SYNJ1O43426 1573 aa24.84■■□□□ 1.57
TRAF3IP1-201ENST00000373327 SENP3-EIF4A1A0A087X0R7 540 aa24.83■■□□□ 1.57
TRAF3IP1-201ENST00000373327 TDRD9Q8NDG6 1382 aaKnown RBP24.76■■□□□ 1.55
TRAF3IP1-201ENST00000373327 IRX6P78412 446 aaPredicted RBP24.73■■□□□ 1.55
TRAF3IP1-201ENST00000373327 HNRNPUQ00839 825 aaKnown RBP eCLIP24.72■■□□□ 1.55
TRAF3IP1-201ENST00000373327 KCNH8Q96L42 1107 aa24.69■■□□□ 1.54
TRAF3IP1-201ENST00000373327 RAB3GAP2Q9H2M9 1393 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms