RNA–Protein interactions for RNA: ENST00000371187.7

NFIA-204, Transcript of nuclear factor I A, humanhuman

TSL 1 (best) BASIC

Gene NFIA, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-204ENST00000371187 PKHD1P08F94 4074 aa3.78□□□□□ -1.8
NFIA-204ENST00000371187 IGKV2-30P06310 120 aa3.78□□□□□ -1.8
NFIA-204ENST00000371187 KRTAP13-1Q8IUC0 172 aa3.78□□□□□ -1.8
NFIA-204ENST00000371187 IGLV9-49A0A0B4J1Y8 123 aa3.78□□□□□ -1.8
NFIA-204ENST00000371187 SPACA4Q8TDM5 124 aa3.78□□□□□ -1.8
NFIA-204ENST00000371187 KIAA1109Q2LD37 5005 aa3.78□□□□□ -1.8
NFIA-204ENST00000371187 ANAPC11Q9NYG5 84 aa3.77□□□□□ -1.81
NFIA-204ENST00000371187 DNAH2Q9P225 4427 aa3.77□□□□□ -1.81
NFIA-204ENST00000371187 KRTAP10-1P60331 282 aa3.77□□□□□ -1.81
NFIA-204ENST00000371187 DNAH17Q9UFH2 4485 aa3.75□□□□□ -1.81
NFIA-204ENST00000371187 IGKV2D-30A0A075B6S6 120 aa3.74□□□□□ -1.81
NFIA-204ENST00000371187 TPRXLQ17RH7 258 aa3.74□□□□□ -1.81
NFIA-204ENST00000371187 A0A1B0GU33 70 aa3.73□□□□□ -1.81
NFIA-204ENST00000371187 RYR1P21817 5038 aa3.73□□□□□ -1.81
NFIA-204ENST00000371187 HECTD4Q9Y4D8 3996 aa3.72□□□□□ -1.81
NFIA-204ENST00000371187 CIRBP-AS1Q8TBR5 109 aa3.72□□□□□ -1.81
NFIA-204ENST00000371187 PCLOQ9Y6V0 5065 aa3.72□□□□□ -1.81
NFIA-204ENST00000371187 H1FX-AS1Q4G0G2 97 aa3.72□□□□□ -1.81
NFIA-204ENST00000371187 FAT2Q9NYQ8 4349 aa3.72□□□□□ -1.81
NFIA-204ENST00000371187 PKD1P98161 4303 aa3.7□□□□□ -1.82
NFIA-204ENST00000371187 KRTAP4-5Q9BYR2 181 aa3.69□□□□□ -1.82
NFIA-204ENST00000371187 DNAH11Q96DT5 4516 aa3.69□□□□□ -1.82
NFIA-204ENST00000371187 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
NFIA-204ENST00000371187 HERC2O95714 4834 aa3.67□□□□□ -1.82
NFIA-204ENST00000371187 ABCA13Q86UQ4 5058 aa3.66□□□□□ -1.82
NFIA-204ENST00000371187 SPINK1P00995 79 aa3.66□□□□□ -1.82
NFIA-204ENST00000371187 DYNC1H1Q14204 4646 aaKnown RBP3.66□□□□□ -1.82
NFIA-204ENST00000371187 FLG2Q5D862 2391 aaPredicted RBP3.66□□□□□ -1.82
NFIA-204ENST00000371187 DNAH5Q8TE73 4624 aa3.65□□□□□ -1.82
NFIA-204ENST00000371187 TYMSOSQ8TAI1 123 aa3.65□□□□□ -1.82
NFIA-204ENST00000371187 SMR3BP02814 79 aaPredicted RBP3.65□□□□□ -1.83
NFIA-204ENST00000371187 LRP1BQ9NZR2 4599 aa3.64□□□□□ -1.83
NFIA-204ENST00000371187 SPINK6Q6UWN8 80 aa3.63□□□□□ -1.83
NFIA-204ENST00000371187 APOBP04114 4563 aaKnown RBP3.62□□□□□ -1.83
NFIA-204ENST00000371187 DNAH8Q96JB1 4490 aa3.62□□□□□ -1.83
NFIA-204ENST00000371187 C10orf95Q9H7T3 257 aa3.61□□□□□ -1.83
NFIA-204ENST00000371187 HSPG2P98160 4391 aa3.61□□□□□ -1.83
NFIA-204ENST00000371187 FAT1Q14517 4588 aa3.6□□□□□ -1.83
NFIA-204ENST00000371187 Q5VSD8 79 aa3.6□□□□□ -1.83
NFIA-204ENST00000371187 RPL37P61927 97 aaKnown RBP3.6□□□□□ -1.83
NFIA-204ENST00000371187 KRTAP10-4P60372 401 aaPredicted RBP3.59□□□□□ -1.83
NFIA-204ENST00000371187 COX6B2Q6YFQ2 88 aa3.58□□□□□ -1.84
NFIA-204ENST00000371187 Q8N1X5 172 aa3.58□□□□□ -1.84
NFIA-204ENST00000371187 MYCBP2O75592 4640 aa3.58□□□□□ -1.84
NFIA-204ENST00000371187 DMBT1Q9UGM3 2413 aaPredicted RBP3.57□□□□□ -1.84
NFIA-204ENST00000371187 HERC1Q15751 4861 aa3.57□□□□□ -1.84
NFIA-204ENST00000371187 KRTAP1-4P0C5Y4 121 aa3.54□□□□□ -1.84
NFIA-204ENST00000371187 CAMK2N1Q7Z7J9 78 aa3.52□□□□□ -1.85
NFIA-204ENST00000371187 KRTAP13-2Q52LG2 175 aa3.52□□□□□ -1.85
NFIA-204ENST00000371187 KRTAP19-4Q3LI73 84 aa3.51□□□□□ -1.85
NFIA-204ENST00000371187 VPS13BQ7Z7G8 4022 aa3.5□□□□□ -1.85
NFIA-204ENST00000371187 LRP1Q07954 4544 aaKnown RBP3.48□□□□□ -1.85
NFIA-204ENST00000371187 PKHD1L1Q86WI1 4243 aa3.48□□□□□ -1.85
NFIA-204ENST00000371187 KRTAP3-1Q9BYR8 98 aa3.46□□□□□ -1.86
NFIA-204ENST00000371187 KRTAP10-8P60410 259 aa3.45□□□□□ -1.86
NFIA-204ENST00000371187 S4R3F8 94 aa3.44□□□□□ -1.86
NFIA-204ENST00000371187 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
NFIA-204ENST00000371187 PLAC4Q8WY50 150 aa3.44□□□□□ -1.86
NFIA-204ENST00000371187 MT1HL1P0DM35 61 aa3.43□□□□□ -1.86
NFIA-204ENST00000371187 A0A0D9SG42 100 aa3.43□□□□□ -1.86
NFIA-204ENST00000371187 KRTAP10-6P60371 365 aaPredicted RBP3.43□□□□□ -1.86
NFIA-204ENST00000371187 RPS29P62273 56 aaKnown RBP3.42□□□□□ -1.86
NFIA-204ENST00000371187 UBR4Q5T4S7 5183 aa3.41□□□□□ -1.86
NFIA-204ENST00000371187 FAT3Q8TDW7 4589 aa3.4□□□□□ -1.87
NFIA-204ENST00000371187 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
NFIA-204ENST00000371187 KRTAP12-2P59991 146 aa3.37□□□□□ -1.87
NFIA-204ENST00000371187 KRTAP23-1A1A580 65 aa3.37□□□□□ -1.87
NFIA-204ENST00000371187 PRO2289Q9P1D8 64 aa3.37□□□□□ -1.87
NFIA-204ENST00000371187 RNF213Q63HN8 5207 aa3.34□□□□□ -1.88
NFIA-204ENST00000371187 KRTAP12-1P59990 96 aa3.34□□□□□ -1.88
NFIA-204ENST00000371187 LRP2P98164 4655 aa3.33□□□□□ -1.88
NFIA-204ENST00000371187 C9orf92A6NGG3 77 aa3.33□□□□□ -1.88
NFIA-204ENST00000371187 TNXBP22105 4242 aa3.33□□□□□ -1.88
NFIA-204ENST00000371187 HMCN2Q8NDA2 5059 aa3.32□□□□□ -1.88
NFIA-204ENST00000371187 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
NFIA-204ENST00000371187 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
NFIA-204ENST00000371187 LPAP08519 4548 aa3.27□□□□□ -1.89
NFIA-204ENST00000371187 MUC2Q02817 5179 aa3.24□□□□□ -1.89
NFIA-204ENST00000371187 KRTAP9-7A8MTY7 169 aa3.24□□□□□ -1.89
NFIA-204ENST00000371187 KRTAP9-3Q9BYQ3 159 aa3.21□□□□□ -1.9
NFIA-204ENST00000371187 INE1O15225 51 aa3.21□□□□□ -1.9
NFIA-204ENST00000371187 R4GN34 69 aa3.21□□□□□ -1.9
NFIA-204ENST00000371187 M0QZ58 72 aa3.19□□□□□ -1.9
NFIA-204ENST00000371187 PP632Q6XCG6 107 aa3.19□□□□□ -1.9
NFIA-204ENST00000371187 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
NFIA-204ENST00000371187 FAT4Q6V0I7 4981 aa3.1□□□□□ -1.91
NFIA-204ENST00000371187 KRTAP4-1Q9BYQ7 146 aa3.07□□□□□ -1.92
NFIA-204ENST00000371187 MUC17Q685J3 4493 aa3.05□□□□□ -1.92
NFIA-204ENST00000371187 FSIP2Q5CZC0 6907 aa3.01□□□□□ -1.93
NFIA-204ENST00000371187 KRTAP19-2Q3LHN2 52 aa2.96□□□□□ -1.93
NFIA-204ENST00000371187 MT1HP80294 61 aa2.9□□□□□ -1.95
NFIA-204ENST00000371187 M0R2T5 61 aa2.88□□□□□ -1.95
NFIA-204ENST00000371187 TNP1P09430 55 aa2.85□□□□□ -1.95
NFIA-204ENST00000371187 FLGP20930 4061 aaPredicted RBP2.83□□□□□ -1.96
NFIA-204ENST00000371187 USH2AO75445 5202 aa2.77□□□□□ -1.97
NFIA-204ENST00000371187 MT2AP02795 61 aa2.76□□□□□ -1.97
NFIA-204ENST00000371187 MT1FP04733 61 aa2.75□□□□□ -1.97
NFIA-204ENST00000371187 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
NFIA-204ENST00000371187 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
NFIA-204ENST00000371187 CRCT1Q9UGL9 99 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms