RNA–Protein interactions for RNA: ENST00000369983.3

GBF1-201, Transcript of golgi brefeldin A resistant guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBF1, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1-201ENST00000369983 COL7A1Q02388 2944 aa5.08□□□□□ -1.6
GBF1-201ENST00000369983 MT1FP04733 61 aa5.05□□□□□ -1.6
GBF1-201ENST00000369983 ZFHX3Q15911 3703 aa5.05□□□□□ -1.6
GBF1-201ENST00000369983 LOC400499M0QZD8 3231 aa5.05□□□□□ -1.6
GBF1-201ENST00000369983 ASPMQ8IZT6 3477 aa5.05□□□□□ -1.6
GBF1-201ENST00000369983 DCHS1Q96JQ0 3298 aa5.03□□□□□ -1.6
GBF1-201ENST00000369983 DNAH10Q8IVF4 4471 aa5.01□□□□□ -1.61
GBF1-201ENST00000369983 SPRR2DP22532 72 aa5□□□□□ -1.61
GBF1-201ENST00000369983 DNAH11Q96DT5 4516 aa4.99□□□□□ -1.61
GBF1-201ENST00000369983 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
GBF1-201ENST00000369983 RELNP78509 3460 aa4.99□□□□□ -1.61
GBF1-201ENST00000369983 DNAH5Q8TE73 4624 aa4.95□□□□□ -1.62
GBF1-201ENST00000369983 DNAH9Q9NYC9 4486 aa4.93□□□□□ -1.62
GBF1-201ENST00000369983 LAMA5O15230 3695 aa4.93□□□□□ -1.62
GBF1-201ENST00000369983 LCE2BO14633 110 aa4.9□□□□□ -1.62
GBF1-201ENST00000369983 PLECQ15149 4684 aaKnown RBP4.89□□□□□ -1.63
GBF1-201ENST00000369983 TRRAPQ9Y4A5 3859 aa4.85□□□□□ -1.63
GBF1-201ENST00000369983 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
GBF1-201ENST00000369983 SPENQ96T58 3664 aaKnown RBP4.83□□□□□ -1.64
GBF1-201ENST00000369983 BSNQ9UPA5 3926 aa4.83□□□□□ -1.64
GBF1-201ENST00000369983 KRTAP19-8Q3LI54 63 aa4.78□□□□□ -1.64
GBF1-201ENST00000369983 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
GBF1-201ENST00000369983 CUBNO60494 3623 aa4.76□□□□□ -1.65
GBF1-201ENST00000369983 DNAH17Q9UFH2 4485 aa4.74□□□□□ -1.65
GBF1-201ENST00000369983 DYNC1H1Q14204 4646 aaKnown RBP4.73□□□□□ -1.65
GBF1-201ENST00000369983 HERC1Q15751 4861 aa4.69□□□□□ -1.66
GBF1-201ENST00000369983 CSMD1Q96PZ7 3565 aa4.69□□□□□ -1.66
GBF1-201ENST00000369983 FAT2Q9NYQ8 4349 aa4.68□□□□□ -1.66
GBF1-201ENST00000369983 MT1GP13640 62 aa4.67□□□□□ -1.66
GBF1-201ENST00000369983 SMG1Q96Q15 3661 aaKnown RBP4.67□□□□□ -1.66
GBF1-201ENST00000369983 VPS13DQ5THJ4 4388 aa4.65□□□□□ -1.66
GBF1-201ENST00000369983 CSMD2Q7Z408 3487 aa4.65□□□□□ -1.67
GBF1-201ENST00000369983 LCE2CQ5TA81 110 aa4.63□□□□□ -1.67
GBF1-201ENST00000369983 KRTAP19-1Q8IUB9 90 aa4.62□□□□□ -1.67
GBF1-201ENST00000369983 FAT1Q14517 4588 aa4.61□□□□□ -1.67
GBF1-201ENST00000369983 DYNC2H1Q8NCM8 4307 aaKnown RBP4.6□□□□□ -1.67
GBF1-201ENST00000369983 SACSQ9NZJ4 4579 aa4.6□□□□□ -1.67
GBF1-201ENST00000369983 LRP1BQ9NZR2 4599 aa4.58□□□□□ -1.68
GBF1-201ENST00000369983 LRP1Q07954 4544 aaKnown RBP4.58□□□□□ -1.68
GBF1-201ENST00000369983 LCE2DQ5TA82 110 aaPredicted RBP4.58□□□□□ -1.68
GBF1-201ENST00000369983 MT1XP80297 61 aa4.57□□□□□ -1.68
GBF1-201ENST00000369983 DNAH3Q8TD57 4116 aa4.55□□□□□ -1.68
GBF1-201ENST00000369983 SVEP1Q4LDE5 3571 aa4.52□□□□□ -1.69
GBF1-201ENST00000369983 AKAP9Q99996 3911 aa4.52□□□□□ -1.69
GBF1-201ENST00000369983 MT1BP07438 61 aa4.52□□□□□ -1.69
GBF1-201ENST00000369983 DNAH8Q96JB1 4490 aa4.5□□□□□ -1.69
GBF1-201ENST00000369983 RYR1P21817 5038 aa4.5□□□□□ -1.69
GBF1-201ENST00000369983 VPS13CQ709C8 3753 aa4.49□□□□□ -1.69
GBF1-201ENST00000369983 KRTAP9-8Q9BYQ0 159 aa4.49□□□□□ -1.69
GBF1-201ENST00000369983 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
GBF1-201ENST00000369983 HSPG2P98160 4391 aa4.47□□□□□ -1.69
GBF1-201ENST00000369983 APOBP04114 4563 aaKnown RBP4.47□□□□□ -1.69
GBF1-201ENST00000369983 FAT3Q8TDW7 4589 aa4.46□□□□□ -1.7
GBF1-201ENST00000369983 DNAH6Q9C0G6 4158 aa4.45□□□□□ -1.7
GBF1-201ENST00000369983 KRTAP9-3Q9BYQ3 159 aa4.45□□□□□ -1.7
GBF1-201ENST00000369983 MYCBP2O75592 4640 aa4.45□□□□□ -1.7
GBF1-201ENST00000369983 DNHD1Q96M86 4753 aa4.43□□□□□ -1.7
GBF1-201ENST00000369983 KRTAP4-8A0A0G2JLE6 195 aa4.42□□□□□ -1.7
GBF1-201ENST00000369983 KRTAP4-8Q9BYQ9 185 aa4.42□□□□□ -1.7
GBF1-201ENST00000369983 DNAH7Q8WXX0 4024 aa4.42□□□□□ -1.7
GBF1-201ENST00000369983 RYR3Q15413 4870 aa4.41□□□□□ -1.7
GBF1-201ENST00000369983 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
GBF1-201ENST00000369983 CMYA5Q8N3K9 4069 aa4.39□□□□□ -1.71
GBF1-201ENST00000369983 KRTAP17-1Q9BYP8 105 aa4.39□□□□□ -1.71
GBF1-201ENST00000369983 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
GBF1-201ENST00000369983 MT4P47944 62 aa4.38□□□□□ -1.71
GBF1-201ENST00000369983 CSMD3Q7Z407 3707 aa4.36□□□□□ -1.71
GBF1-201ENST00000369983 PRKDCP78527 4128 aaKnown RBP4.34□□□□□ -1.71
GBF1-201ENST00000369983 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
GBF1-201ENST00000369983 STARD9Q9P2P6 4700 aa4.31□□□□□ -1.72
GBF1-201ENST00000369983 KRTAP9-2Q9BYQ4 174 aa4.3□□□□□ -1.72
GBF1-201ENST00000369983 PKHD1L1Q86WI1 4243 aa4.29□□□□□ -1.72
GBF1-201ENST00000369983 MT1LQ93083 61 aa4.26□□□□□ -1.73
GBF1-201ENST00000369983 MT3P25713 68 aa4.26□□□□□ -1.73
GBF1-201ENST00000369983 RYR2Q92736 4967 aa4.25□□□□□ -1.73
GBF1-201ENST00000369983 VPS13BQ7Z7G8 4022 aa4.25□□□□□ -1.73
GBF1-201ENST00000369983 ZNF469Q96JG9 3925 aaPredicted RBP4.24□□□□□ -1.73
GBF1-201ENST00000369983 ANK2Q01484 3957 aa4.23□□□□□ -1.73
GBF1-201ENST00000369983 KRTAP9-6A0A140TA67 174 aa4.21□□□□□ -1.74
GBF1-201ENST00000369983 MT1EP04732 61 aa4.2□□□□□ -1.74
GBF1-201ENST00000369983 PKD1P98161 4303 aa4.19□□□□□ -1.74
GBF1-201ENST00000369983 KRTAP19-6Q3LI70 58 aa4.19□□□□□ -1.74
GBF1-201ENST00000369983 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
GBF1-201ENST00000369983 FRAS1Q86XX4 4008 aa4.18□□□□□ -1.74
GBF1-201ENST00000369983 BIRC6Q9NR09 4857 aa4.17□□□□□ -1.74
GBF1-201ENST00000369983 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
GBF1-201ENST00000369983 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
GBF1-201ENST00000369983 HERC2O95714 4834 aa4.12□□□□□ -1.75
GBF1-201ENST00000369983 MT1MQ8N339 61 aa4.12□□□□□ -1.75
GBF1-201ENST00000369983 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.76
GBF1-201ENST00000369983 KMT2AQ03164 3969 aa4.07□□□□□ -1.76
GBF1-201ENST00000369983 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
GBF1-201ENST00000369983 PCLOQ9Y6V0 5065 aa3.98□□□□□ -1.77
GBF1-201ENST00000369983 PRM1P04553 51 aa3.97□□□□□ -1.77
GBF1-201ENST00000369983 KRTAP19-2Q3LHN2 52 aa3.96□□□□□ -1.78
GBF1-201ENST00000369983 LRP2P98164 4655 aa3.94□□□□□ -1.78
GBF1-201ENST00000369983 KRTAP9-7A8MTY7 169 aa3.94□□□□□ -1.78
GBF1-201ENST00000369983 KIAA1109Q2LD37 5005 aa3.94□□□□□ -1.78
GBF1-201ENST00000369983 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
GBF1-201ENST00000369983 MUC17Q685J3 4493 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms