RNA–Protein interactions for RNA: ENST00000369558.5

HIPK1-205, Transcript of homeodomain interacting protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK1, Length 8,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-205ENST00000369558 DNAH2Q9P225 4427 aa6.26□□□□□ -1.41
HIPK1-205ENST00000369558 KRTAP4-5Q9BYR2 181 aa6.26□□□□□ -1.41
HIPK1-205ENST00000369558 DNAH9Q9NYC9 4486 aa6.25□□□□□ -1.41
HIPK1-205ENST00000369558 VPS13BQ7Z7G8 4022 aa6.23□□□□□ -1.41
HIPK1-205ENST00000369558 CMYA5Q8N3K9 4069 aa6.22□□□□□ -1.41
HIPK1-205ENST00000369558 PRKDCP78527 4128 aaKnown RBP6.17□□□□□ -1.42
HIPK1-205ENST00000369558 KRTAP10-4P60372 401 aaPredicted RBP6.15□□□□□ -1.42
HIPK1-205ENST00000369558 ALMS1Q8TCU4 4167 aa6.14□□□□□ -1.43
HIPK1-205ENST00000369558 DNAH3Q8TD57 4116 aa6.13□□□□□ -1.43
HIPK1-205ENST00000369558 CRCT1Q9UGL9 99 aa6.12□□□□□ -1.43
HIPK1-205ENST00000369558 PLECQ15149 4684 aaKnown RBP6.11□□□□□ -1.43
HIPK1-205ENST00000369558 KRTAP10-12P60413 245 aa6.08□□□□□ -1.44
HIPK1-205ENST00000369558 DNAH7Q8WXX0 4024 aa6.08□□□□□ -1.44
HIPK1-205ENST00000369558 DNAH11Q96DT5 4516 aa6.07□□□□□ -1.44
HIPK1-205ENST00000369558 HECTD4Q9Y4D8 3996 aa6.06□□□□□ -1.44
HIPK1-205ENST00000369558 LORP23490 312 aaPredicted RBP6.03□□□□□ -1.44
HIPK1-205ENST00000369558 STARD9Q9P2P6 4700 aa6□□□□□ -1.45
HIPK1-205ENST00000369558 DNAH6Q9C0G6 4158 aa5.99□□□□□ -1.45
HIPK1-205ENST00000369558 DNAH5Q8TE73 4624 aa5.97□□□□□ -1.45
HIPK1-205ENST00000369558 DNAH8Q96JB1 4490 aa5.94□□□□□ -1.46
HIPK1-205ENST00000369558 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
HIPK1-205ENST00000369558 KRTAP12-3P60328 96 aa5.92□□□□□ -1.46
HIPK1-205ENST00000369558 VPS13DQ5THJ4 4388 aa5.85□□□□□ -1.47
HIPK1-205ENST00000369558 FAT2Q9NYQ8 4349 aa5.82□□□□□ -1.48
HIPK1-205ENST00000369558 INE1O15225 51 aa5.82□□□□□ -1.48
HIPK1-205ENST00000369558 DNAH17Q9UFH2 4485 aa5.79□□□□□ -1.48
HIPK1-205ENST00000369558 FAT1Q14517 4588 aa5.77□□□□□ -1.49
HIPK1-205ENST00000369558 LRP1BQ9NZR2 4599 aa5.77□□□□□ -1.49
HIPK1-205ENST00000369558 DNHD1Q96M86 4753 aa5.73□□□□□ -1.49
HIPK1-205ENST00000369558 DYNC2H1Q8NCM8 4307 aaKnown RBP5.72□□□□□ -1.49
HIPK1-205ENST00000369558 KRTAP4-1Q9BYQ7 146 aa5.72□□□□□ -1.49
HIPK1-205ENST00000369558 MYCBP2O75592 4640 aa5.71□□□□□ -1.49
HIPK1-205ENST00000369558 PKHD1P08F94 4074 aa5.69□□□□□ -1.5
HIPK1-205ENST00000369558 FAT3Q8TDW7 4589 aa5.67□□□□□ -1.5
HIPK1-205ENST00000369558 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
HIPK1-205ENST00000369558 KRTAP10-5P60370 271 aa5.59□□□□□ -1.51
HIPK1-205ENST00000369558 APOBP04114 4563 aaKnown RBP5.56□□□□□ -1.52
HIPK1-205ENST00000369558 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
HIPK1-205ENST00000369558 MT1HP80294 61 aa5.51□□□□□ -1.53
HIPK1-205ENST00000369558 DYNC1H1Q14204 4646 aaKnown RBP5.51□□□□□ -1.53
HIPK1-205ENST00000369558 SACSQ9NZJ4 4579 aa5.5□□□□□ -1.53
HIPK1-205ENST00000369558 LRP1Q07954 4544 aaKnown RBP5.49□□□□□ -1.53
HIPK1-205ENST00000369558 MT2AP02795 61 aa5.42□□□□□ -1.54
HIPK1-205ENST00000369558 RYR1P21817 5038 aa5.41□□□□□ -1.54
HIPK1-205ENST00000369558 SPRR2GQ9BYE4 73 aa5.39□□□□□ -1.55
HIPK1-205ENST00000369558 MT1FP04733 61 aa5.37□□□□□ -1.55
HIPK1-205ENST00000369558 KRTAP19-5Q3LI72 72 aa5.32□□□□□ -1.56
HIPK1-205ENST00000369558 LPAP08519 4548 aa5.24□□□□□ -1.57
HIPK1-205ENST00000369558 KRTAP17-1Q9BYP8 105 aa5.23□□□□□ -1.57
HIPK1-205ENST00000369558 LRP2P98164 4655 aa5.22□□□□□ -1.57
HIPK1-205ENST00000369558 SPRR2FQ96RM1 72 aa5.21□□□□□ -1.57
HIPK1-205ENST00000369558 LCE3CQ5T5A8 94 aa5.19□□□□□ -1.58
HIPK1-205ENST00000369558 HSPG2P98160 4391 aa5.18□□□□□ -1.58
HIPK1-205ENST00000369558 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.59
HIPK1-205ENST00000369558 PKD1P98161 4303 aa5.15□□□□□ -1.59
HIPK1-205ENST00000369558 PKHD1L1Q86WI1 4243 aa5.14□□□□□ -1.59
HIPK1-205ENST00000369558 RYR3Q15413 4870 aa5.09□□□□□ -1.59
HIPK1-205ENST00000369558 KRTAP19-1Q8IUB9 90 aa5.08□□□□□ -1.6
HIPK1-205ENST00000369558 HYDINQ4G0P3 5121 aa5.08□□□□□ -1.6
HIPK1-205ENST00000369558 FLGP20930 4061 aaPredicted RBP5.08□□□□□ -1.6
HIPK1-205ENST00000369558 TNXBP22105 4242 aa5.07□□□□□ -1.6
HIPK1-205ENST00000369558 MT1XP80297 61 aa4.97□□□□□ -1.61
HIPK1-205ENST00000369558 KIAA1109Q2LD37 5005 aa4.95□□□□□ -1.62
HIPK1-205ENST00000369558 LCE3BQ5TA77 95 aa4.94□□□□□ -1.62
HIPK1-205ENST00000369558 KRTAP4-8A0A0G2JLE6 195 aa4.92□□□□□ -1.62
HIPK1-205ENST00000369558 KRTAP4-8Q9BYQ9 185 aa4.92□□□□□ -1.62
HIPK1-205ENST00000369558 KRTAP19-8Q3LI54 63 aa4.9□□□□□ -1.62
HIPK1-205ENST00000369558 MT1GP13640 62 aa4.87□□□□□ -1.63
HIPK1-205ENST00000369558 KRTAP9-8Q9BYQ0 159 aa4.87□□□□□ -1.63
HIPK1-205ENST00000369558 KMT2CQ8NEZ4 4911 aaKnown RBP4.85□□□□□ -1.63
HIPK1-205ENST00000369558 MT1BP07438 61 aa4.85□□□□□ -1.63
HIPK1-205ENST00000369558 SPRR2EP22531 72 aa4.81□□□□□ -1.64
HIPK1-205ENST00000369558 SPRR2BP35325 72 aa4.81□□□□□ -1.64
HIPK1-205ENST00000369558 SPRR2AP35326 72 aa4.81□□□□□ -1.64
HIPK1-205ENST00000369558 KRTAP12-4P60329 112 aa4.78□□□□□ -1.64
HIPK1-205ENST00000369558 LCE2CQ5TA81 110 aa4.76□□□□□ -1.65
HIPK1-205ENST00000369558 HERC2O95714 4834 aa4.72□□□□□ -1.65
HIPK1-205ENST00000369558 KRTAP9-3Q9BYQ3 159 aa4.7□□□□□ -1.66
HIPK1-205ENST00000369558 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
HIPK1-205ENST00000369558 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
HIPK1-205ENST00000369558 SPRR5A0A1B0GTR4 108 aa4.64□□□□□ -1.67
HIPK1-205ENST00000369558 RYR2Q92736 4967 aa4.64□□□□□ -1.67
HIPK1-205ENST00000369558 LCE2BO14633 110 aa4.63□□□□□ -1.67
HIPK1-205ENST00000369558 PCLOQ9Y6V0 5065 aa4.63□□□□□ -1.67
HIPK1-205ENST00000369558 SPRR2DP22532 72 aa4.62□□□□□ -1.67
HIPK1-205ENST00000369558 FSIP2Q5CZC0 6907 aa4.57□□□□□ -1.68
HIPK1-205ENST00000369558 KRTAP19-2Q3LHN2 52 aa4.52□□□□□ -1.69
HIPK1-205ENST00000369558 LCE3DQ9BYE3 92 aa4.52□□□□□ -1.69
HIPK1-205ENST00000369558 MT1LQ93083 61 aa4.46□□□□□ -1.69
HIPK1-205ENST00000369558 MUC17Q685J3 4493 aa4.46□□□□□ -1.69
HIPK1-205ENST00000369558 KRTAP19-3Q7Z4W3 81 aa4.45□□□□□ -1.7
HIPK1-205ENST00000369558 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
HIPK1-205ENST00000369558 SYNE2Q8WXH0 6885 aaKnown RBP4.44□□□□□ -1.7
HIPK1-205ENST00000369558 MT1EP04732 61 aa4.42□□□□□ -1.7
HIPK1-205ENST00000369558 HERC1Q15751 4861 aa4.42□□□□□ -1.7
HIPK1-205ENST00000369558 MUC2Q02817 5179 aa4.4□□□□□ -1.7
HIPK1-205ENST00000369558 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.71
HIPK1-205ENST00000369558 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
HIPK1-205ENST00000369558 BIRC6Q9NR09 4857 aa4.33□□□□□ -1.72
HIPK1-205ENST00000369558 HMCN2Q8NDA2 5059 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms