RNA–Protein interactions for RNA: ENST00000367537.7

SMG7-202, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMG7, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-202ENST00000367537 FAT3Q8TDW7 4589 aa4.44□□□□□ -1.7
SMG7-202ENST00000367537 KRTAP13-3Q3SY46 172 aa4.44□□□□□ -1.7
SMG7-202ENST00000367537 PKHD1P08F94 4074 aa4.43□□□□□ -1.7
SMG7-202ENST00000367537 DNAH3Q8TD57 4116 aa4.43□□□□□ -1.7
SMG7-202ENST00000367537 HECTD4Q9Y4D8 3996 aa4.39□□□□□ -1.71
SMG7-202ENST00000367537 VPS13BQ7Z7G8 4022 aa4.38□□□□□ -1.71
SMG7-202ENST00000367537 LRP1Q07954 4544 aaKnown RBP4.38□□□□□ -1.71
SMG7-202ENST00000367537 KIAA1109Q2LD37 5005 aa4.37□□□□□ -1.71
SMG7-202ENST00000367537 H0YAA0 97 aa4.35□□□□□ -1.71
SMG7-202ENST00000367537 KRTAP10-8P60410 259 aa4.35□□□□□ -1.71
SMG7-202ENST00000367537 A0A1B0GVY2 172 aa4.34□□□□□ -1.71
SMG7-202ENST00000367537 DYNC1H1Q14204 4646 aaKnown RBP4.34□□□□□ -1.71
SMG7-202ENST00000367537 KMT2CQ8NEZ4 4911 aaKnown RBP4.32□□□□□ -1.72
SMG7-202ENST00000367537 FAT2Q9NYQ8 4349 aa4.32□□□□□ -1.72
SMG7-202ENST00000367537 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
SMG7-202ENST00000367537 KRTAP3-1Q9BYR8 98 aa4.27□□□□□ -1.73
SMG7-202ENST00000367537 DYNC2H1Q8NCM8 4307 aaKnown RBP4.27□□□□□ -1.73
SMG7-202ENST00000367537 C10orf95Q9H7T3 257 aa4.26□□□□□ -1.73
SMG7-202ENST00000367537 P0C880 135 aa4.26□□□□□ -1.73
SMG7-202ENST00000367537 APOBP04114 4563 aaKnown RBP4.25□□□□□ -1.73
SMG7-202ENST00000367537 RYR1P21817 5038 aa4.25□□□□□ -1.73
SMG7-202ENST00000367537 PRO2289Q9P1D8 64 aa4.25□□□□□ -1.73
SMG7-202ENST00000367537 KRTAP10-10P60014 251 aa4.23□□□□□ -1.73
SMG7-202ENST00000367537 SACSQ9NZJ4 4579 aa4.23□□□□□ -1.73
SMG7-202ENST00000367537 RYR3Q15413 4870 aa4.2□□□□□ -1.74
SMG7-202ENST00000367537 LRP2P98164 4655 aa4.18□□□□□ -1.74
SMG7-202ENST00000367537 ALMS1Q8TCU4 4167 aa4.17□□□□□ -1.74
SMG7-202ENST00000367537 KRTAP10-4P60372 401 aaPredicted RBP4.13□□□□□ -1.75
SMG7-202ENST00000367537 EPPK1P58107 5090 aaKnown RBP4.12□□□□□ -1.75
SMG7-202ENST00000367537 KRTAP13-4Q3LI77 160 aa4.11□□□□□ -1.75
SMG7-202ENST00000367537 HSPG2P98160 4391 aa4.09□□□□□ -1.76
SMG7-202ENST00000367537 PKD1P98161 4303 aa4.08□□□□□ -1.76
SMG7-202ENST00000367537 KRTAP17-1Q9BYP8 105 aa4.08□□□□□ -1.76
SMG7-202ENST00000367537 MUC2Q02817 5179 aa4.07□□□□□ -1.76
SMG7-202ENST00000367537 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
SMG7-202ENST00000367537 KRTAP12-1P59990 96 aa4.05□□□□□ -1.76
SMG7-202ENST00000367537 KRTAP4-5Q9BYR2 181 aa4.05□□□□□ -1.76
SMG7-202ENST00000367537 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
SMG7-202ENST00000367537 KRTAP3-3Q9BYR6 98 aa4.03□□□□□ -1.76
SMG7-202ENST00000367537 RYR2Q92736 4967 aa4.02□□□□□ -1.77
SMG7-202ENST00000367537 LPAP08519 4548 aa4.01□□□□□ -1.77
SMG7-202ENST00000367537 MT1HL1P0DM35 61 aa3.98□□□□□ -1.77
SMG7-202ENST00000367537 ABCA13Q86UQ4 5058 aa3.98□□□□□ -1.77
SMG7-202ENST00000367537 KRTAP3-2Q9BYR7 98 aa3.97□□□□□ -1.77
SMG7-202ENST00000367537 RNF213Q63HN8 5207 aa3.93□□□□□ -1.78
SMG7-202ENST00000367537 HERC2O95714 4834 aa3.91□□□□□ -1.78
SMG7-202ENST00000367537 PKHD1L1Q86WI1 4243 aa3.89□□□□□ -1.79
SMG7-202ENST00000367537 FAT4Q6V0I7 4981 aa3.89□□□□□ -1.79
SMG7-202ENST00000367537 LORP23490 312 aaPredicted RBP3.88□□□□□ -1.79
SMG7-202ENST00000367537 PCLOQ9Y6V0 5065 aa3.84□□□□□ -1.79
SMG7-202ENST00000367537 HERC1Q15751 4861 aa3.84□□□□□ -1.79
SMG7-202ENST00000367537 KRTAP15-1Q3LI76 137 aa3.81□□□□□ -1.8
SMG7-202ENST00000367537 KRTAP4-1Q9BYQ7 146 aa3.8□□□□□ -1.8
SMG7-202ENST00000367537 KRTAP23-1A1A580 65 aa3.76□□□□□ -1.81
SMG7-202ENST00000367537 TNXBP22105 4242 aa3.75□□□□□ -1.81
SMG7-202ENST00000367537 KRTAP10-12P60413 245 aa3.72□□□□□ -1.81
SMG7-202ENST00000367537 UBR4Q5T4S7 5183 aa3.7□□□□□ -1.82
SMG7-202ENST00000367537 INE1O15225 51 aa3.66□□□□□ -1.82
SMG7-202ENST00000367537 FSIP2Q5CZC0 6907 aa3.65□□□□□ -1.82
SMG7-202ENST00000367537 HMCN2Q8NDA2 5059 aa3.64□□□□□ -1.83
SMG7-202ENST00000367537 KRTAP12-3P60328 96 aa3.62□□□□□ -1.83
SMG7-202ENST00000367537 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
SMG7-202ENST00000367537 USH2AO75445 5202 aa3.53□□□□□ -1.84
SMG7-202ENST00000367537 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
SMG7-202ENST00000367537 MUC17Q685J3 4493 aa3.48□□□□□ -1.85
SMG7-202ENST00000367537 BIRC6Q9NR09 4857 aa3.47□□□□□ -1.85
SMG7-202ENST00000367537 SPRR2GQ9BYE4 73 aa3.43□□□□□ -1.86
SMG7-202ENST00000367537 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
SMG7-202ENST00000367537 MT1HP80294 61 aa3.41□□□□□ -1.86
SMG7-202ENST00000367537 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
SMG7-202ENST00000367537 KRTAP8-1Q8IUC2 63 aa3.4□□□□□ -1.86
SMG7-202ENST00000367537 KMT2DO14686 5537 aa3.39□□□□□ -1.87
SMG7-202ENST00000367537 MT2AP02795 61 aa3.39□□□□□ -1.87
SMG7-202ENST00000367537 FLGP20930 4061 aaPredicted RBP3.38□□□□□ -1.87
SMG7-202ENST00000367537 MT1FP04733 61 aa3.36□□□□□ -1.87
SMG7-202ENST00000367537 KRTAP19-1Q8IUB9 90 aa3.35□□□□□ -1.87
SMG7-202ENST00000367537 SYNE1Q8NF91 8797 aaKnown RBP3.35□□□□□ -1.87
SMG7-202ENST00000367537 KRTAP19-4Q3LI73 84 aa3.35□□□□□ -1.87
SMG7-202ENST00000367537 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
SMG7-202ENST00000367537 LCE2CQ5TA81 110 aa3.34□□□□□ -1.87
SMG7-202ENST00000367537 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
SMG7-202ENST00000367537 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
SMG7-202ENST00000367537 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
SMG7-202ENST00000367537 KRTAP9-8Q9BYQ0 159 aa3.21□□□□□ -1.89
SMG7-202ENST00000367537 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
SMG7-202ENST00000367537 KRTAP19-5Q3LI72 72 aa3.18□□□□□ -1.9
SMG7-202ENST00000367537 LCE3CQ5T5A8 94 aa3.17□□□□□ -1.9
SMG7-202ENST00000367537 MT1BP07438 61 aa3.15□□□□□ -1.9
SMG7-202ENST00000367537 KRTAP4-8A0A0G2JLE6 195 aa3.14□□□□□ -1.91
SMG7-202ENST00000367537 KRTAP4-8Q9BYQ9 185 aa3.14□□□□□ -1.91
SMG7-202ENST00000367537 MT1XP80297 61 aa3.14□□□□□ -1.91
SMG7-202ENST00000367537 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
SMG7-202ENST00000367537 MUC12Q9UKN1 5478 aa3.08□□□□□ -1.92
SMG7-202ENST00000367537 KRTAP9-3Q9BYQ3 159 aa3.05□□□□□ -1.92
SMG7-202ENST00000367537 LCE2BO14633 110 aa3.05□□□□□ -1.92
SMG7-202ENST00000367537 KRTAP4-7Q9BYR0 210 aa3.05□□□□□ -1.92
SMG7-202ENST00000367537 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
SMG7-202ENST00000367537 SSPOA2VEC9 5147 aa2.97□□□□□ -1.93
SMG7-202ENST00000367537 MT1GP13640 62 aa2.95□□□□□ -1.94
SMG7-202ENST00000367537 SPRR2EP22531 72 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms