RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 KRTAP12-2P59991 146 aa2.69□□□□□ -1.98
CDC42BPA-204ENST00000366767 MEGF8Q7Z7M0 2845 aa2.68□□□□□ -1.98
CDC42BPA-204ENST00000366767 FRAS1Q86XX4 4008 aa2.67□□□□□ -1.98
CDC42BPA-204ENST00000366767 KRTAP10-4P60372 401 aaPredicted RBP2.67□□□□□ -1.98
CDC42BPA-204ENST00000366767 KRTAP15-1Q3LI76 137 aa2.67□□□□□ -1.98
CDC42BPA-204ENST00000366767 DNAH5Q8TE73 4624 aa2.65□□□□□ -1.99
CDC42BPA-204ENST00000366767 INE1O15225 51 aa2.64□□□□□ -1.99
CDC42BPA-204ENST00000366767 LRP1BQ9NZR2 4599 aa2.64□□□□□ -1.99
CDC42BPA-204ENST00000366767 ANK2Q01484 3957 aa2.63□□□□□ -1.99
CDC42BPA-204ENST00000366767 KRTAP10-6P60371 365 aaPredicted RBP2.63□□□□□ -1.99
CDC42BPA-204ENST00000366767 LYSTQ99698 3801 aa2.62□□□□□ -1.99
CDC42BPA-204ENST00000366767 FBN3Q75N90 2809 aa2.62□□□□□ -1.99
CDC42BPA-204ENST00000366767 STARD9Q9P2P6 4700 aa2.62□□□□□ -1.99
CDC42BPA-204ENST00000366767 DYNC1H1Q14204 4646 aaKnown RBP2.62□□□□□ -1.99
CDC42BPA-204ENST00000366767 KRTAP13-4Q3LI77 160 aa2.62□□□□□ -1.99
CDC42BPA-204ENST00000366767 KRTAP12-1P59990 96 aa2.61□□□□□ -1.99
CDC42BPA-204ENST00000366767 LCE2BO14633 110 aa2.6□□□□□ -1.99
CDC42BPA-204ENST00000366767 PRO2289Q9P1D8 64 aa2.58□□□□□ -2
CDC42BPA-204ENST00000366767 MT1HL1P0DM35 61 aa2.58□□□□□ -2
CDC42BPA-204ENST00000366767 FAT2Q9NYQ8 4349 aa2.56□□□□□ -2
CDC42BPA-204ENST00000366767 PRKDCP78527 4128 aaKnown RBP2.56□□□□□ -2
CDC42BPA-204ENST00000366767 LCE2AQ5TA79 106 aaPredicted RBP2.56□□□□□ -2
CDC42BPA-204ENST00000366767 LCE2CQ5TA81 110 aa2.55□□□□□ -2
CDC42BPA-204ENST00000366767 DNAH7Q8WXX0 4024 aa2.55□□□□□ -2
CDC42BPA-204ENST00000366767 KMT2AQ03164 3969 aa2.54□□□□□ -2
CDC42BPA-204ENST00000366767 FAT1Q14517 4588 aa2.53□□□□□ -2
CDC42BPA-204ENST00000366767 KRTAP10-10P60014 251 aa2.53□□□□□ -2
CDC42BPA-204ENST00000366767 APOBP04114 4563 aaKnown RBP2.53□□□□□ -2
CDC42BPA-204ENST00000366767 FAT3Q8TDW7 4589 aa2.52□□□□□ -2.01
CDC42BPA-204ENST00000366767 HECTD4Q9Y4D8 3996 aa2.51□□□□□ -2.01
CDC42BPA-204ENST00000366767 VPS13BQ7Z7G8 4022 aa2.5□□□□□ -2.01
CDC42BPA-204ENST00000366767 LORP23490 312 aaPredicted RBP2.5□□□□□ -2.01
CDC42BPA-204ENST00000366767 KRTAP23-1A1A580 65 aa2.49□□□□□ -2.01
CDC42BPA-204ENST00000366767 DNHD1Q96M86 4753 aa2.48□□□□□ -2.01
CDC42BPA-204ENST00000366767 PKHD1L1Q86WI1 4243 aa2.48□□□□□ -2.01
CDC42BPA-204ENST00000366767 PKD1P98161 4303 aa2.42□□□□□ -2.02
CDC42BPA-204ENST00000366767 HYDINQ4G0P3 5121 aa2.4□□□□□ -2.03
CDC42BPA-204ENST00000366767 HSPG2P98160 4391 aa2.37□□□□□ -2.03
CDC42BPA-204ENST00000366767 MYCBP2O75592 4640 aa2.37□□□□□ -2.03
CDC42BPA-204ENST00000366767 RYR2Q92736 4967 aa2.37□□□□□ -2.03
CDC42BPA-204ENST00000366767 LRP1Q07954 4544 aaKnown RBP2.36□□□□□ -2.03
CDC42BPA-204ENST00000366767 KRTAP4-5Q9BYR2 181 aa2.35□□□□□ -2.03
CDC42BPA-204ENST00000366767 RYR1P21817 5038 aa2.34□□□□□ -2.03
CDC42BPA-204ENST00000366767 TNXBP22105 4242 aa2.34□□□□□ -2.03
CDC42BPA-204ENST00000366767 PKHD1P08F94 4074 aa2.33□□□□□ -2.04
CDC42BPA-204ENST00000366767 CRCT1Q9UGL9 99 aa2.3□□□□□ -2.04
CDC42BPA-204ENST00000366767 KRTAP4-1Q9BYQ7 146 aa2.29□□□□□ -2.04
CDC42BPA-204ENST00000366767 MUC17Q685J3 4493 aa2.29□□□□□ -2.04
CDC42BPA-204ENST00000366767 RYR3Q15413 4870 aa2.29□□□□□ -2.04
CDC42BPA-204ENST00000366767 PCLOQ9Y6V0 5065 aa2.29□□□□□ -2.04
CDC42BPA-204ENST00000366767 KRTAP10-12P60413 245 aa2.28□□□□□ -2.04
CDC42BPA-204ENST00000366767 HERC1Q15751 4861 aa2.27□□□□□ -2.05
CDC42BPA-204ENST00000366767 LCE3AQ5TA76 89 aa2.26□□□□□ -2.05
CDC42BPA-204ENST00000366767 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
CDC42BPA-204ENST00000366767 SPRR2GQ9BYE4 73 aa2.25□□□□□ -2.05
CDC42BPA-204ENST00000366767 FLGP20930 4061 aaPredicted RBP2.23□□□□□ -2.05
CDC42BPA-204ENST00000366767 KRTAP17-1Q9BYP8 105 aa2.23□□□□□ -2.05
CDC42BPA-204ENST00000366767 MT1HP80294 61 aa2.2□□□□□ -2.06
CDC42BPA-204ENST00000366767 KRTAP19-4Q3LI73 84 aa2.19□□□□□ -2.06
CDC42BPA-204ENST00000366767 LRP2P98164 4655 aa2.18□□□□□ -2.06
CDC42BPA-204ENST00000366767 KRTAP10-5P60370 271 aa2.18□□□□□ -2.06
CDC42BPA-204ENST00000366767 KIAA1109Q2LD37 5005 aa2.18□□□□□ -2.06
CDC42BPA-204ENST00000366767 KMT2CQ8NEZ4 4911 aaKnown RBP2.17□□□□□ -2.06
CDC42BPA-204ENST00000366767 LPAP08519 4548 aa2.16□□□□□ -2.06
CDC42BPA-204ENST00000366767 MT2AP02795 61 aa2.16□□□□□ -2.06
CDC42BPA-204ENST00000366767 KRTAP19-8Q3LI54 63 aa2.14□□□□□ -2.07
CDC42BPA-204ENST00000366767 KRTAP19-2Q3LHN2 52 aa2.14□□□□□ -2.07
CDC42BPA-204ENST00000366767 KRTAP8-1Q8IUC2 63 aa2.13□□□□□ -2.07
CDC42BPA-204ENST00000366767 BIRC6Q9NR09 4857 aa2.12□□□□□ -2.07
CDC42BPA-204ENST00000366767 KRTAP19-1Q8IUB9 90 aa2.12□□□□□ -2.07
CDC42BPA-204ENST00000366767 HERC2O95714 4834 aa2.12□□□□□ -2.07
CDC42BPA-204ENST00000366767 MT1FP04733 61 aa2.12□□□□□ -2.07
CDC42BPA-204ENST00000366767 SPRR5A0A1B0GTR4 108 aa2.1□□□□□ -2.07
CDC42BPA-204ENST00000366767 KRTAP9-8Q9BYQ0 159 aa2.06□□□□□ -2.08
CDC42BPA-204ENST00000366767 EPPK1P58107 5090 aaKnown RBP2.04□□□□□ -2.08
CDC42BPA-204ENST00000366767 KRTAP10-7P60409 375 aaPredicted RBP2.04□□□□□ -2.08
CDC42BPA-204ENST00000366767 MT1BP07438 61 aa2.03□□□□□ -2.08
CDC42BPA-204ENST00000366767 MT1XP80297 61 aa2.02□□□□□ -2.09
CDC42BPA-204ENST00000366767 LCE3CQ5T5A8 94 aa2□□□□□ -2.09
CDC42BPA-204ENST00000366767 KRTAP19-5Q3LI72 72 aa1.99□□□□□ -2.09
CDC42BPA-204ENST00000366767 KRTAP9-3Q9BYQ3 159 aa1.98□□□□□ -2.09
CDC42BPA-204ENST00000366767 ABCA13Q86UQ4 5058 aa1.96□□□□□ -2.1
CDC42BPA-204ENST00000366767 HMCN2Q8NDA2 5059 aa1.94□□□□□ -2.1
CDC42BPA-204ENST00000366767 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
CDC42BPA-204ENST00000366767 UBR4Q5T4S7 5183 aa1.9□□□□□ -2.11
CDC42BPA-204ENST00000366767 FAT4Q6V0I7 4981 aa1.89□□□□□ -2.11
CDC42BPA-204ENST00000366767 SPRR2FQ96RM1 72 aa1.88□□□□□ -2.11
CDC42BPA-204ENST00000366767 SPRR2EP22531 72 aa1.83□□□□□ -2.12
CDC42BPA-204ENST00000366767 SPRR2BP35325 72 aa1.83□□□□□ -2.12
CDC42BPA-204ENST00000366767 SPRR2AP35326 72 aa1.83□□□□□ -2.12
CDC42BPA-204ENST00000366767 LCE3BQ5TA77 95 aa1.83□□□□□ -2.12
CDC42BPA-204ENST00000366767 KRTAP4-8A0A0G2JLE6 195 aa1.82□□□□□ -2.12
CDC42BPA-204ENST00000366767 KRTAP4-8Q9BYQ9 185 aa1.82□□□□□ -2.12
CDC42BPA-204ENST00000366767 MT1GP13640 62 aa1.82□□□□□ -2.12
CDC42BPA-204ENST00000366767 MT1LQ93083 61 aa1.8□□□□□ -2.12
CDC42BPA-204ENST00000366767 MT1EP04732 61 aa1.8□□□□□ -2.12
CDC42BPA-204ENST00000366767 KRTAP19-6Q3LI70 58 aa1.79□□□□□ -2.12
CDC42BPA-204ENST00000366767 RNF213Q63HN8 5207 aa1.78□□□□□ -2.12
CDC42BPA-204ENST00000366767 LCE5AQ5TCM9 118 aa1.78□□□□□ -2.12
CDC42BPA-204ENST00000366767 LCE3DQ9BYE3 92 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms