RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 NOTCH2Q04721 2471 aa1.5□□□□□ -2.17
RNU6-249P-201ENST00000363016 SMG1Q96Q15 3661 aaKnown RBP1.5□□□□□ -2.17
RNU6-249P-201ENST00000363016 HIVEP1P15822 2718 aa1.49□□□□□ -2.17
RNU6-249P-201ENST00000363016 USP9XQ93008 2570 aaPredicted RBP1.49□□□□□ -2.17
RNU6-249P-201ENST00000363016 STAB1Q9NY15 2570 aa1.49□□□□□ -2.17
RNU6-249P-201ENST00000363016 PKHD1L1Q86WI1 4243 aa1.49□□□□□ -2.17
RNU6-249P-201ENST00000363016 KRTAP9-6A8MVA2 160 aa1.48□□□□□ -2.17
RNU6-249P-201ENST00000363016 ANK3Q12955 4377 aaKnown RBP1.48□□□□□ -2.17
RNU6-249P-201ENST00000363016 NBEAL2Q6ZNJ1 2754 aa1.47□□□□□ -2.17
RNU6-249P-201ENST00000363016 ITPR2Q14571 2701 aa1.47□□□□□ -2.17
RNU6-249P-201ENST00000363016 ANKRD11Q6UB99 2663 aaPredicted RBP1.47□□□□□ -2.17
RNU6-249P-201ENST00000363016 FBN3Q75N90 2809 aa1.47□□□□□ -2.17
RNU6-249P-201ENST00000363016 FAT2Q9NYQ8 4349 aa1.46□□□□□ -2.18
RNU6-249P-201ENST00000363016 LAMA5O15230 3695 aa1.46□□□□□ -2.18
RNU6-249P-201ENST00000363016 HRNRQ86YZ3 2850 aaPredicted RBP1.46□□□□□ -2.18
RNU6-249P-201ENST00000363016 ACACBO00763 2458 aa1.46□□□□□ -2.18
RNU6-249P-201ENST00000363016 TEP1Q99973 2627 aaKnown RBP1.46□□□□□ -2.18
RNU6-249P-201ENST00000363016 LAMA1P25391 3075 aa1.46□□□□□ -2.18
RNU6-249P-201ENST00000363016 CSMD1Q96PZ7 3565 aa1.46□□□□□ -2.18
RNU6-249P-201ENST00000363016 SPEGQ15772 3267 aa1.45□□□□□ -2.18
RNU6-249P-201ENST00000363016 MUC3AQ02505 3323 aa1.45□□□□□ -2.18
RNU6-249P-201ENST00000363016 LAMA3Q16787 3333 aa1.45□□□□□ -2.18
RNU6-249P-201ENST00000363016 HECTD4Q9Y4D8 3996 aa1.44□□□□□ -2.18
RNU6-249P-201ENST00000363016 DNAH10Q8IVF4 4471 aa1.44□□□□□ -2.18
RNU6-249P-201ENST00000363016 DNAH1Q9P2D7 4330 aa1.43□□□□□ -2.18
RNU6-249P-201ENST00000363016 UNC79Q9P2D8 2635 aa1.42□□□□□ -2.18
RNU6-249P-201ENST00000363016 SMR3BP02814 79 aaPredicted RBP1.42□□□□□ -2.18
RNU6-249P-201ENST00000363016 LOC400499M0QZD8 3231 aa1.42□□□□□ -2.18
RNU6-249P-201ENST00000363016 TEX15Q9BXT5 2789 aa1.42□□□□□ -2.18
RNU6-249P-201ENST00000363016 PKD1P98161 4303 aa1.42□□□□□ -2.18
RNU6-249P-201ENST00000363016 XIRP2A4UGR9 3374 aa1.41□□□□□ -2.18
RNU6-249P-201ENST00000363016 SPTBN5Q9NRC6 3674 aaKnown RBP1.41□□□□□ -2.18
RNU6-249P-201ENST00000363016 NOTCH1P46531 2555 aa1.41□□□□□ -2.18
RNU6-249P-201ENST00000363016 MYO18BQ8IUG5 2567 aa1.41□□□□□ -2.18
RNU6-249P-201ENST00000363016 UTRNP46939 3433 aa1.41□□□□□ -2.18
RNU6-249P-201ENST00000363016 CMYA5Q8N3K9 4069 aa1.41□□□□□ -2.18
RNU6-249P-201ENST00000363016 TLN2Q9Y4G6 2542 aa1.39□□□□□ -2.19
RNU6-249P-201ENST00000363016 EP400Q96L91 3159 aa1.39□□□□□ -2.19
RNU6-249P-201ENST00000363016 HSPG2P98160 4391 aa1.39□□□□□ -2.19
RNU6-249P-201ENST00000363016 DNAH6Q9C0G6 4158 aa1.39□□□□□ -2.19
RNU6-249P-201ENST00000363016 NBEAL1Q6ZS30 2694 aa1.39□□□□□ -2.19
RNU6-249P-201ENST00000363016 CUBNO60494 3623 aa1.39□□□□□ -2.19
RNU6-249P-201ENST00000363016 FAT3Q8TDW7 4589 aa1.39□□□□□ -2.19
RNU6-249P-201ENST00000363016 FLNAP21333 2647 aaKnown RBP1.38□□□□□ -2.19
RNU6-249P-201ENST00000363016 FLNBO75369 2602 aaKnown RBP1.38□□□□□ -2.19
RNU6-249P-201ENST00000363016 ZFYVE26Q68DK2 2539 aa1.37□□□□□ -2.19
RNU6-249P-201ENST00000363016 DOPEY1Q5JWR5 2465 aa1.37□□□□□ -2.19
RNU6-249P-201ENST00000363016 HUWE1Q7Z6Z7 4374 aaKnown RBP1.37□□□□□ -2.19
RNU6-249P-201ENST00000363016 TENM3Q9P273 2699 aa1.36□□□□□ -2.19
RNU6-249P-201ENST00000363016 SVEP1Q4LDE5 3571 aa1.36□□□□□ -2.19
RNU6-249P-201ENST00000363016 TLN1Q9Y490 2541 aaKnown RBP1.36□□□□□ -2.19
RNU6-249P-201ENST00000363016 CEP295Q9C0D2 2601 aa1.36□□□□□ -2.19
RNU6-249P-201ENST00000363016 USP34Q70CQ2 3546 aa1.35□□□□□ -2.19
RNU6-249P-201ENST00000363016 DNAH9Q9NYC9 4486 aa1.34□□□□□ -2.19
RNU6-249P-201ENST00000363016 MT1AP04731 61 aa1.34□□□□□ -2.19
RNU6-249P-201ENST00000363016 ADGRG4Q8IZF6 3080 aa1.34□□□□□ -2.2
RNU6-249P-201ENST00000363016 CSMD2Q7Z408 3487 aa1.34□□□□□ -2.2
RNU6-249P-201ENST00000363016 KRTAP19-3Q7Z4W3 81 aa1.33□□□□□ -2.2
RNU6-249P-201ENST00000363016 TRRAPQ9Y4A5 3859 aa1.33□□□□□ -2.2
RNU6-249P-201ENST00000363016 LAMA2P24043 3122 aaKnown RBP1.33□□□□□ -2.2
RNU6-249P-201ENST00000363016 KRTAP19-5Q3LI72 72 aa1.32□□□□□ -2.2
RNU6-249P-201ENST00000363016 STAB2Q8WWQ8 2551 aa1.31□□□□□ -2.2
RNU6-249P-201ENST00000363016 SPRR2DP22532 72 aa1.31□□□□□ -2.2
RNU6-249P-201ENST00000363016 LCE1CQ5T751 118 aa1.31□□□□□ -2.2
RNU6-249P-201ENST00000363016 LCE1BQ5T7P3 118 aa1.31□□□□□ -2.2
RNU6-249P-201ENST00000363016 CENPFP49454 3210 aa1.3□□□□□ -2.2
RNU6-249P-201ENST00000363016 SPRR2BP35325 72 aa1.3□□□□□ -2.2
RNU6-249P-201ENST00000363016 KRTAP5-5Q701N2 237 aaPredicted RBP1.3□□□□□ -2.2
RNU6-249P-201ENST00000363016 APOBP04114 4563 aaKnown RBP1.3□□□□□ -2.2
RNU6-249P-201ENST00000363016 LRP1Q07954 4544 aaKnown RBP1.29□□□□□ -2.2
RNU6-249P-201ENST00000363016 PKHD1P08F94 4074 aa1.29□□□□□ -2.2
RNU6-249P-201ENST00000363016 ASPMQ8IZT6 3477 aa1.29□□□□□ -2.2
RNU6-249P-201ENST00000363016 SPTAN1Q13813 2472 aaKnown RBP1.29□□□□□ -2.2
RNU6-249P-201ENST00000363016 PLECQ15149 4684 aaKnown RBP1.29□□□□□ -2.2
RNU6-249P-201ENST00000363016 FASNP49327 2511 aaKnown RBP1.28□□□□□ -2.2
RNU6-249P-201ENST00000363016 MGAM2Q2M2H8 2515 aa1.28□□□□□ -2.2
RNU6-249P-201ENST00000363016 DNAH17Q9UFH2 4485 aa1.28□□□□□ -2.21
RNU6-249P-201ENST00000363016 SPRR2AP35326 72 aa1.27□□□□□ -2.21
RNU6-249P-201ENST00000363016 DNAH5Q8TE73 4624 aa1.25□□□□□ -2.21
RNU6-249P-201ENST00000363016 VPS13CQ709C8 3753 aa1.25□□□□□ -2.21
RNU6-249P-201ENST00000363016 LPAP08519 4548 aa1.25□□□□□ -2.21
RNU6-249P-201ENST00000363016 PCNTO95613 3336 aa1.25□□□□□ -2.21
RNU6-249P-201ENST00000363016 VCANP13611 3396 aa1.24□□□□□ -2.21
RNU6-249P-201ENST00000363016 EYSQ5T1H1 3165 aa1.22□□□□□ -2.21
RNU6-249P-201ENST00000363016 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
RNU6-249P-201ENST00000363016 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
RNU6-249P-201ENST00000363016 BRCA2P51587 3418 aa1.2□□□□□ -2.22
RNU6-249P-201ENST00000363016 MYO15AQ9UKN7 3530 aa1.19□□□□□ -2.22
RNU6-249P-201ENST00000363016 SPRR2FQ96RM1 72 aa1.19□□□□□ -2.22
RNU6-249P-201ENST00000363016 DYNC1H1Q14204 4646 aaKnown RBP1.19□□□□□ -2.22
RNU6-249P-201ENST00000363016 MYO9AB2RTY4 2548 aa1.19□□□□□ -2.22
RNU6-249P-201ENST00000363016 TENM1Q9UKZ4 2725 aa1.17□□□□□ -2.22
RNU6-249P-201ENST00000363016 FAT1Q14517 4588 aa1.17□□□□□ -2.22
RNU6-249P-201ENST00000363016 MAST4O15021 2626 aa1.17□□□□□ -2.22
RNU6-249P-201ENST00000363016 IGSF10Q6WRI0 2623 aa1.16□□□□□ -2.22
RNU6-249P-201ENST00000363016 UNC80Q8N2C7 3258 aa1.14□□□□□ -2.23
RNU6-249P-201ENST00000363016 SPRR2EP22531 72 aa1.14□□□□□ -2.23
RNU6-249P-201ENST00000363016 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
RNU6-249P-201ENST00000363016 KRTAP5-11Q6L8G4 156 aa1.12□□□□□ -2.23
RNU6-249P-201ENST00000363016 SPRR2GQ9BYE4 73 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms