RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 SLC24A1O60721 1099 aa10.82□□□□□ -0.68
RNU6-249P-201ENST00000363016 CHIC1Q5VXU3 224 aa10.06□□□□□ -0.8
RNU6-249P-201ENST00000363016 DAXXQ9UER7 740 aaPredicted RBP9.93□□□□□ -0.82
RNU6-249P-201ENST00000363016 MYT1Q01538 1121 aa9.92□□□□□ -0.82
RNU6-249P-201ENST00000363016 TTBK1Q5TCY1 1321 aaPredicted RBP9.91□□□□□ -0.82
RNU6-249P-201ENST00000363016 EHMT2Q96KQ7 1210 aa9.9□□□□□ -0.82
RNU6-249P-201ENST00000363016 PELP1Q8IZL8 1130 aaKnown RBP9.72□□□□□ -0.85
RNU6-249P-201ENST00000363016 NCBP3Q53F19 620 aaKnown RBP9.71□□□□□ -0.86
RNU6-249P-201ENST00000363016 AMER1Q5JTC6 1135 aaPredicted RBP9.61□□□□□ -0.87
RNU6-249P-201ENST00000363016 RTN4Q9NQC3 1192 aaKnown RBP9.58□□□□□ -0.88
RNU6-249P-201ENST00000363016 ERICH6Q7L0X2 663 aa9.56□□□□□ -0.88
RNU6-249P-201ENST00000363016 PLPPR3Q6T4P5 718 aa9.5□□□□□ -0.89
RNU6-249P-201ENST00000363016 APLP2Q06481 763 aa9.43□□□□□ -0.9
RNU6-249P-201ENST00000363016 ARXQ96QS3 562 aa9.42□□□□□ -0.9
RNU6-249P-201ENST00000363016 RANGAP1P46060 587 aaPredicted RBP9.3□□□□□ -0.92
RNU6-249P-201ENST00000363016 PRKCSHP14314 528 aaPredicted RBP9.23□□□□□ -0.93
RNU6-249P-201ENST00000363016 KCNA4P22459 653 aa9.19□□□□□ -0.94
RNU6-249P-201ENST00000363016 CSRNP3Q8WYN3 585 aa9.16□□□□□ -0.94
RNU6-249P-201ENST00000363016 HOMEZQ8IX15 550 aa9.12□□□□□ -0.95
RNU6-249P-201ENST00000363016 AEBP2Q6ZN18 517 aaPredicted RBP9.1□□□□□ -0.95
RNU6-249P-201ENST00000363016 TIMELESSQ9UNS1 1208 aa9.04□□□□□ -0.96
RNU6-249P-201ENST00000363016 BCANQ96GW7 911 aa9.03□□□□□ -0.96
RNU6-249P-201ENST00000363016 TAOK2Q9UL54 1235 aa9.02□□□□□ -0.97
RNU6-249P-201ENST00000363016 TULP1O00294 542 aaPredicted RBP8.99□□□□□ -0.97
RNU6-249P-201ENST00000363016 PHF23Q9BUL5 403 aaPredicted RBP8.93□□□□□ -0.98
RNU6-249P-201ENST00000363016 EIF5BO60841 1220 aaKnown RBP8.9□□□□□ -0.98
RNU6-249P-201ENST00000363016 TPRNQ4KMQ1 711 aa8.85□□□□□ -0.99
RNU6-249P-201ENST00000363016 PODXL2Q9NZ53 605 aa8.81□□□□□ -1
RNU6-249P-201ENST00000363016 GTF3C3Q9Y5Q9 886 aa8.8□□□□□ -1
RNU6-249P-201ENST00000363016 SLC4A1APQ9BWU0 796 aaKnown RBP8.79□□□□□ -1
RNU6-249P-201ENST00000363016 PLCB2Q00722 1185 aa8.74□□□□□ -1.01
RNU6-249P-201ENST00000363016 KLHL34Q8N239 644 aa8.72□□□□□ -1.01
RNU6-249P-201ENST00000363016 HAP1P54257 671 aaPredicted RBP8.69□□□□□ -1.02
RNU6-249P-201ENST00000363016 NPM2Q86SE8 214 aaKnown RBP8.69□□□□□ -1.02
RNU6-249P-201ENST00000363016 FBXO3Q9UK99 471 aa8.69□□□□□ -1.02
RNU6-249P-201ENST00000363016 DCAF8L2P0C7V8 631 aa8.6□□□□□ -1.03
RNU6-249P-201ENST00000363016 C14orf37Q86TY3 774 aa8.57□□□□□ -1.04
RNU6-249P-201ENST00000363016 VSIG10Q8N0Z9 540 aa8.57□□□□□ -1.04
RNU6-249P-201ENST00000363016 TMEM132AQ24JP5 1023 aa8.55□□□□□ -1.04
RNU6-249P-201ENST00000363016 TRIM26Q12899 539 aaPredicted RBP8.34□□□□□ -1.07
RNU6-249P-201ENST00000363016 HMGB1P09429 215 aaKnown RBP8.32□□□□□ -1.08
RNU6-249P-201ENST00000363016 PLEKHG5O94827 1062 aa8.3□□□□□ -1.08
RNU6-249P-201ENST00000363016 CDK11AQ9UQ88 783 aaPredicted RBP8.3□□□□□ -1.08
RNU6-249P-201ENST00000363016 SUPT5HO00267 1087 aaKnown RBP8.28□□□□□ -1.08
RNU6-249P-201ENST00000363016 FKBP8Q14318 412 aa8.28□□□□□ -1.08
RNU6-249P-201ENST00000363016 BCL11AQ9H165 835 aa8.28□□□□□ -1.08
RNU6-249P-201ENST00000363016 CDK11BP21127 795 aaKnown RBP8.25□□□□□ -1.09
RNU6-249P-201ENST00000363016 SHROOM4Q9ULL8 1493 aa8.24□□□□□ -1.09
RNU6-249P-201ENST00000363016 PDIA4P13667 645 aaKnown RBP8.23□□□□□ -1.09
RNU6-249P-201ENST00000363016 KDM2AQ9Y2K7 1162 aa8.21□□□□□ -1.1
RNU6-249P-201ENST00000363016 ZBTB22O15209 634 aa8.2□□□□□ -1.1
RNU6-249P-201ENST00000363016 LOC105371045A0A1W2PR82 267 aa8.18□□□□□ -1.1
RNU6-249P-201ENST00000363016 UBTFP17480 764 aaKnown RBP8.18□□□□□ -1.1
RNU6-249P-201ENST00000363016 HRCP23327 699 aa8.18□□□□□ -1.1
RNU6-249P-201ENST00000363016 UBE2Q2Q8WVN8 375 aa8.15□□□□□ -1.1
RNU6-249P-201ENST00000363016 HSP90B1P14625 803 aaKnown RBP8.14□□□□□ -1.11
RNU6-249P-201ENST00000363016 NBR1Q14596 966 aa8.14□□□□□ -1.11
RNU6-249P-201ENST00000363016 CCDC9Q9Y3X0 531 aaKnown RBP8.14□□□□□ -1.11
RNU6-249P-201ENST00000363016 CNKSR2Q8WXI2 1034 aa8.13□□□□□ -1.11
RNU6-249P-201ENST00000363016 NEFLP07196 543 aa8.11□□□□□ -1.11
RNU6-249P-201ENST00000363016 BRD2P25440 801 aaKnown RBP8.11□□□□□ -1.11
RNU6-249P-201ENST00000363016 FBLN2P98095 1184 aa8.11□□□□□ -1.11
RNU6-249P-201ENST00000363016 CHMP4AQ9BY43 222 aa8.08□□□□□ -1.12
RNU6-249P-201ENST00000363016 ADRA2BP18089 450 aa8.07□□□□□ -1.12
RNU6-249P-201ENST00000363016 TAF7LQ5H9L4 462 aa8.06□□□□□ -1.12
RNU6-249P-201ENST00000363016 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.06□□□□□ -1.12
RNU6-249P-201ENST00000363016 PDE4CQ08493 712 aa8.04□□□□□ -1.12
RNU6-249P-201ENST00000363016 ZBTB7CA1YPR0 619 aa8.03□□□□□ -1.12
RNU6-249P-201ENST00000363016 SAMD1Q6SPF0 538 aaPredicted RBP8□□□□□ -1.13
RNU6-249P-201ENST00000363016 NPM3O75607 178 aaKnown RBP7.99□□□□□ -1.13
RNU6-249P-201ENST00000363016 PUS7Q96PZ0 661 aaKnown RBP7.98□□□□□ -1.13
RNU6-249P-201ENST00000363016 FAM9AQ8IZU1 332 aaPredicted RBP7.97□□□□□ -1.13
RNU6-249P-201ENST00000363016 PAXIP1Q6ZW49 1069 aaPredicted RBP7.95□□□□□ -1.14
RNU6-249P-201ENST00000363016 BBXQ8WY36 941 aaPredicted RBP7.93□□□□□ -1.14
RNU6-249P-201ENST00000363016 CFAP44Q96MT7 982 aa7.93□□□□□ -1.14
RNU6-249P-201ENST00000363016 FOXD4L1Q9NU39 408 aa7.93□□□□□ -1.14
RNU6-249P-201ENST00000363016 POLR3GLQ9BT43 218 aa7.92□□□□□ -1.14
RNU6-249P-201ENST00000363016 IGSF3O75054 1194 aa7.9□□□□□ -1.14
RNU6-249P-201ENST00000363016 ZNF326Q5BKZ1 582 aaKnown RBP7.9□□□□□ -1.14
RNU6-249P-201ENST00000363016 PKNOX2Q96KN3 472 aa7.88□□□□□ -1.15
RNU6-249P-201ENST00000363016 BCCIPQ9P287 314 aaKnown RBP eCLIP7.88□□□□□ -1.15
RNU6-249P-201ENST00000363016 DHX37Q8IY37 1157 aaKnown RBP7.87□□□□□ -1.15
RNU6-249P-201ENST00000363016 PPP4R3CPQ6ZMV5 832 aa7.84□□□□□ -1.15
RNU6-249P-201ENST00000363016 TSHZ2Q9NRE2 1034 aa7.82□□□□□ -1.16
RNU6-249P-201ENST00000363016 PPP6R1Q9UPN7 881 aa7.81□□□□□ -1.16
RNU6-249P-201ENST00000363016 ARID3AQ99856 593 aa7.8□□□□□ -1.16
RNU6-249P-201ENST00000363016 SPRYD3Q8NCJ5 442 aa7.79□□□□□ -1.16
RNU6-249P-201ENST00000363016 RSPH6AQ9H0K4 717 aa7.78□□□□□ -1.16
RNU6-249P-201ENST00000363016 ZMYND15Q9H091 742 aa7.77□□□□□ -1.17
RNU6-249P-201ENST00000363016 CLSTN1O94985 981 aa7.73□□□□□ -1.17
RNU6-249P-201ENST00000363016 CENPBP07199 599 aaPredicted RBP7.72□□□□□ -1.17
RNU6-249P-201ENST00000363016 FGD1P98174 961 aa7.72□□□□□ -1.17
RNU6-249P-201ENST00000363016 RSPH4AQ5TD94 716 aa7.72□□□□□ -1.17
RNU6-249P-201ENST00000363016 BCL11BQ9C0K0 894 aaPredicted RBP7.7□□□□□ -1.18
RNU6-249P-201ENST00000363016 RAD21O60216 631 aa7.69□□□□□ -1.18
RNU6-249P-201ENST00000363016 NPM1P06748 294 aaKnown RBP eCLIP7.69□□□□□ -1.18
RNU6-249P-201ENST00000363016 KCTD17Q8N5Z5 321 aa7.69□□□□□ -1.18
RNU6-249P-201ENST00000363016 DNAJC5Q9H3Z4 198 aa7.69□□□□□ -1.18
RNU6-249P-201ENST00000363016 TICAM2Q86XR7 235 aa7.68□□□□□ -1.18
RNU6-249P-201ENST00000363016 NECTIN2Q92692 538 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms