RNA–Protein interactions for RNA: ENST00000361204.8

SREBF2-201, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SREBF2, Length 5,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-201ENST00000361204 LORP23490 312 aaPredicted RBP7.75□□□□□ -1.17
SREBF2-201ENST00000361204 DNHD1Q96M86 4753 aa7.74□□□□□ -1.17
SREBF2-201ENST00000361204 DNAH5Q8TE73 4624 aa7.71□□□□□ -1.18
SREBF2-201ENST00000361204 PLECQ15149 4684 aaKnown RBP7.69□□□□□ -1.18
SREBF2-201ENST00000361204 KRTAP12-3P60328 96 aa7.67□□□□□ -1.18
SREBF2-201ENST00000361204 LCE3AQ5TA76 89 aa7.64□□□□□ -1.19
SREBF2-201ENST00000361204 DNAH11Q96DT5 4516 aa7.64□□□□□ -1.19
SREBF2-201ENST00000361204 DNAH1Q9P2D7 4330 aa7.6□□□□□ -1.19
SREBF2-201ENST00000361204 DNAH10Q8IVF4 4471 aa7.54□□□□□ -1.2
SREBF2-201ENST00000361204 ALMS1Q8TCU4 4167 aa7.47□□□□□ -1.21
SREBF2-201ENST00000361204 FAT1Q14517 4588 aa7.43□□□□□ -1.22
SREBF2-201ENST00000361204 STARD9Q9P2P6 4700 aa7.4□□□□□ -1.22
SREBF2-201ENST00000361204 VPS13DQ5THJ4 4388 aa7.4□□□□□ -1.23
SREBF2-201ENST00000361204 DYNC1H1Q14204 4646 aaKnown RBP7.36□□□□□ -1.23
SREBF2-201ENST00000361204 CRCT1Q9UGL9 99 aa7.34□□□□□ -1.23
SREBF2-201ENST00000361204 DNAH17Q9UFH2 4485 aa7.34□□□□□ -1.23
SREBF2-201ENST00000361204 LRP1BQ9NZR2 4599 aa7.31□□□□□ -1.24
SREBF2-201ENST00000361204 PRKDCP78527 4128 aaKnown RBP7.28□□□□□ -1.24
SREBF2-201ENST00000361204 DNAH2Q9P225 4427 aa7.27□□□□□ -1.25
SREBF2-201ENST00000361204 RYR1P21817 5038 aa7.26□□□□□ -1.25
SREBF2-201ENST00000361204 DNAH8Q96JB1 4490 aa7.24□□□□□ -1.25
SREBF2-201ENST00000361204 KRTAP4-1Q9BYQ7 146 aa7.23□□□□□ -1.25
SREBF2-201ENST00000361204 KMT2AQ03164 3969 aa7.15□□□□□ -1.26
SREBF2-201ENST00000361204 LYSTQ99698 3801 aa7.13□□□□□ -1.27
SREBF2-201ENST00000361204 SACSQ9NZJ4 4579 aa7.11□□□□□ -1.27
SREBF2-201ENST00000361204 MYCBP2O75592 4640 aa7.07□□□□□ -1.28
SREBF2-201ENST00000361204 SPRR2GQ9BYE4 73 aa7.07□□□□□ -1.28
SREBF2-201ENST00000361204 ANK2Q01484 3957 aa7.07□□□□□ -1.28
SREBF2-201ENST00000361204 KIAA1109Q2LD37 5005 aa7.05□□□□□ -1.28
SREBF2-201ENST00000361204 KRTAP10-5P60370 271 aa7.04□□□□□ -1.28
SREBF2-201ENST00000361204 DNAH3Q8TD57 4116 aa7.03□□□□□ -1.28
SREBF2-201ENST00000361204 DYNC2H1Q8NCM8 4307 aaKnown RBP7.02□□□□□ -1.29
SREBF2-201ENST00000361204 FAT2Q9NYQ8 4349 aa7.02□□□□□ -1.29
SREBF2-201ENST00000361204 VPS13BQ7Z7G8 4022 aa7.01□□□□□ -1.29
SREBF2-201ENST00000361204 APOBP04114 4563 aaKnown RBP6.98□□□□□ -1.29
SREBF2-201ENST00000361204 MT2AP02795 61 aa6.94□□□□□ -1.3
SREBF2-201ENST00000361204 KRTAP8-1Q8IUC2 63 aa6.93□□□□□ -1.3
SREBF2-201ENST00000361204 RYR3Q15413 4870 aa6.92□□□□□ -1.3
SREBF2-201ENST00000361204 MT1HP80294 61 aa6.91□□□□□ -1.3
SREBF2-201ENST00000361204 LRP1Q07954 4544 aaKnown RBP6.85□□□□□ -1.31
SREBF2-201ENST00000361204 FAT3Q8TDW7 4589 aa6.84□□□□□ -1.32
SREBF2-201ENST00000361204 KRTAP17-1Q9BYP8 105 aa6.82□□□□□ -1.32
SREBF2-201ENST00000361204 MT1FP04733 61 aa6.81□□□□□ -1.32
SREBF2-201ENST00000361204 FRAS1Q86XX4 4008 aa6.81□□□□□ -1.32
SREBF2-201ENST00000361204 DNAH6Q9C0G6 4158 aa6.79□□□□□ -1.32
SREBF2-201ENST00000361204 CMYA5Q8N3K9 4069 aa6.78□□□□□ -1.32
SREBF2-201ENST00000361204 LCE3CQ5T5A8 94 aa6.78□□□□□ -1.32
SREBF2-201ENST00000361204 KRTAP19-5Q3LI72 72 aa6.77□□□□□ -1.33
SREBF2-201ENST00000361204 DNAH7Q8WXX0 4024 aa6.69□□□□□ -1.34
SREBF2-201ENST00000361204 HECTD4Q9Y4D8 3996 aa6.68□□□□□ -1.34
SREBF2-201ENST00000361204 SPRR5A0A1B0GTR4 108 aa6.65□□□□□ -1.34
SREBF2-201ENST00000361204 KRTAP19-1Q8IUB9 90 aa6.64□□□□□ -1.35
SREBF2-201ENST00000361204 HYDINQ4G0P3 5121 aa6.63□□□□□ -1.35
SREBF2-201ENST00000361204 RYR2Q92736 4967 aa6.6□□□□□ -1.35
SREBF2-201ENST00000361204 HERC2O95714 4834 aa6.58□□□□□ -1.36
SREBF2-201ENST00000361204 LRP2P98164 4655 aa6.57□□□□□ -1.36
SREBF2-201ENST00000361204 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
SREBF2-201ENST00000361204 KRTAP19-8Q3LI54 63 aa6.54□□□□□ -1.36
SREBF2-201ENST00000361204 KRTAP10-7P60409 375 aaPredicted RBP6.53□□□□□ -1.36
SREBF2-201ENST00000361204 PKHD1P08F94 4074 aa6.52□□□□□ -1.37
SREBF2-201ENST00000361204 MT1XP80297 61 aa6.43□□□□□ -1.38
SREBF2-201ENST00000361204 HSPG2P98160 4391 aa6.38□□□□□ -1.39
SREBF2-201ENST00000361204 MT1BP07438 61 aa6.33□□□□□ -1.4
SREBF2-201ENST00000361204 KMT2CQ8NEZ4 4911 aaKnown RBP6.31□□□□□ -1.4
SREBF2-201ENST00000361204 SPRR2FQ96RM1 72 aa6.3□□□□□ -1.4
SREBF2-201ENST00000361204 PCLOQ9Y6V0 5065 aa6.29□□□□□ -1.4
SREBF2-201ENST00000361204 BIRC6Q9NR09 4857 aa6.27□□□□□ -1.41
SREBF2-201ENST00000361204 LPAP08519 4548 aa6.25□□□□□ -1.41
SREBF2-201ENST00000361204 KRTAP12-4P60329 112 aa6.24□□□□□ -1.41
SREBF2-201ENST00000361204 PKD1P98161 4303 aa6.22□□□□□ -1.41
SREBF2-201ENST00000361204 KRTAP9-8Q9BYQ0 159 aa6.21□□□□□ -1.41
SREBF2-201ENST00000361204 HERC1Q15751 4861 aa6.18□□□□□ -1.42
SREBF2-201ENST00000361204 LCE2CQ5TA81 110 aa6.16□□□□□ -1.42
SREBF2-201ENST00000361204 LCE3BQ5TA77 95 aa6.12□□□□□ -1.43
SREBF2-201ENST00000361204 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
SREBF2-201ENST00000361204 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
SREBF2-201ENST00000361204 MT1GP13640 62 aa6.1□□□□□ -1.43
SREBF2-201ENST00000361204 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
SREBF2-201ENST00000361204 EPPK1P58107 5090 aaKnown RBP6.03□□□□□ -1.44
SREBF2-201ENST00000361204 ABCA13Q86UQ4 5058 aa6.01□□□□□ -1.45
SREBF2-201ENST00000361204 KRTAP19-2Q3LHN2 52 aa5.98□□□□□ -1.45
SREBF2-201ENST00000361204 TNXBP22105 4242 aa5.97□□□□□ -1.45
SREBF2-201ENST00000361204 MUC17Q685J3 4493 aa5.91□□□□□ -1.46
SREBF2-201ENST00000361204 KRTAP4-7Q9BYR0 210 aa5.89□□□□□ -1.47
SREBF2-201ENST00000361204 LCE3DQ9BYE3 92 aa5.89□□□□□ -1.47
SREBF2-201ENST00000361204 PKHD1L1Q86WI1 4243 aa5.88□□□□□ -1.47
SREBF2-201ENST00000361204 LCE3EQ5T5B0 92 aa5.83□□□□□ -1.48
SREBF2-201ENST00000361204 MT1LQ93083 61 aa5.83□□□□□ -1.48
SREBF2-201ENST00000361204 FLGP20930 4061 aaPredicted RBP5.81□□□□□ -1.48
SREBF2-201ENST00000361204 FSIP2Q5CZC0 6907 aa5.81□□□□□ -1.48
SREBF2-201ENST00000361204 LCE2BO14633 110 aa5.77□□□□□ -1.49
SREBF2-201ENST00000361204 UBR4Q5T4S7 5183 aa5.76□□□□□ -1.49
SREBF2-201ENST00000361204 SPRR2EP22531 72 aa5.75□□□□□ -1.49
SREBF2-201ENST00000361204 SPRR2BP35325 72 aa5.75□□□□□ -1.49
SREBF2-201ENST00000361204 SPRR2AP35326 72 aa5.75□□□□□ -1.49
SREBF2-201ENST00000361204 MT1EP04732 61 aa5.74□□□□□ -1.49
SREBF2-201ENST00000361204 KRTAP19-3Q7Z4W3 81 aa5.71□□□□□ -1.49
SREBF2-201ENST00000361204 FAT4Q6V0I7 4981 aa5.7□□□□□ -1.5
SREBF2-201ENST00000361204 SYNE1Q8NF91 8797 aaKnown RBP5.68□□□□□ -1.5
SREBF2-201ENST00000361204 RNF213Q63HN8 5207 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms