RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
GTF3C1-201ENST00000356183 MT1HL1P0DM35 61 aa4.75□□□□□ -1.65
GTF3C1-201ENST00000356183 KRTAP10-4P60372 401 aaPredicted RBP4.72□□□□□ -1.65
GTF3C1-201ENST00000356183 LORP23490 312 aaPredicted RBP4.64□□□□□ -1.67
GTF3C1-201ENST00000356183 ALMS1Q8TCU4 4167 aa4.61□□□□□ -1.67
GTF3C1-201ENST00000356183 DNAH9Q9NYC9 4486 aa4.61□□□□□ -1.67
GTF3C1-201ENST00000356183 DNAH1Q9P2D7 4330 aa4.54□□□□□ -1.68
GTF3C1-201ENST00000356183 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
GTF3C1-201ENST00000356183 DNAH10Q8IVF4 4471 aa4.51□□□□□ -1.69
GTF3C1-201ENST00000356183 DNAH2Q9P225 4427 aa4.46□□□□□ -1.7
GTF3C1-201ENST00000356183 KMT2AQ03164 3969 aa4.46□□□□□ -1.7
GTF3C1-201ENST00000356183 DNAH11Q96DT5 4516 aa4.45□□□□□ -1.7
GTF3C1-201ENST00000356183 DNAH5Q8TE73 4624 aa4.43□□□□□ -1.7
GTF3C1-201ENST00000356183 PLECQ15149 4684 aaKnown RBP4.43□□□□□ -1.7
GTF3C1-201ENST00000356183 CMYA5Q8N3K9 4069 aa4.4□□□□□ -1.71
GTF3C1-201ENST00000356183 DNAH17Q9UFH2 4485 aa4.4□□□□□ -1.71
GTF3C1-201ENST00000356183 FRAS1Q86XX4 4008 aa4.4□□□□□ -1.71
GTF3C1-201ENST00000356183 DNAH3Q8TD57 4116 aa4.39□□□□□ -1.71
GTF3C1-201ENST00000356183 ANK2Q01484 3957 aa4.38□□□□□ -1.71
GTF3C1-201ENST00000356183 PRKDCP78527 4128 aaKnown RBP4.36□□□□□ -1.71
GTF3C1-201ENST00000356183 LYSTQ99698 3801 aa4.36□□□□□ -1.71
GTF3C1-201ENST00000356183 VPS13BQ7Z7G8 4022 aa4.34□□□□□ -1.71
GTF3C1-201ENST00000356183 VPS13DQ5THJ4 4388 aa4.34□□□□□ -1.72
GTF3C1-201ENST00000356183 STARD9Q9P2P6 4700 aa4.3□□□□□ -1.72
GTF3C1-201ENST00000356183 SACSQ9NZJ4 4579 aa4.3□□□□□ -1.72
GTF3C1-201ENST00000356183 DYNC1H1Q14204 4646 aaKnown RBP4.28□□□□□ -1.72
GTF3C1-201ENST00000356183 FAT2Q9NYQ8 4349 aa4.27□□□□□ -1.73
GTF3C1-201ENST00000356183 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
GTF3C1-201ENST00000356183 DNAH8Q96JB1 4490 aa4.26□□□□□ -1.73
GTF3C1-201ENST00000356183 KRTAP4-1Q9BYQ7 146 aa4.26□□□□□ -1.73
GTF3C1-201ENST00000356183 LRP1BQ9NZR2 4599 aa4.24□□□□□ -1.73
GTF3C1-201ENST00000356183 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
GTF3C1-201ENST00000356183 DYNC2H1Q8NCM8 4307 aaKnown RBP4.23□□□□□ -1.73
GTF3C1-201ENST00000356183 FAT1Q14517 4588 aa4.22□□□□□ -1.73
GTF3C1-201ENST00000356183 SPRR2FQ96RM1 72 aa4.21□□□□□ -1.74
GTF3C1-201ENST00000356183 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
GTF3C1-201ENST00000356183 DNHD1Q96M86 4753 aa4.16□□□□□ -1.74
GTF3C1-201ENST00000356183 DNAH7Q8WXX0 4024 aa4.16□□□□□ -1.74
GTF3C1-201ENST00000356183 DNAH6Q9C0G6 4158 aa4.16□□□□□ -1.74
GTF3C1-201ENST00000356183 MT1HP80294 61 aa4.16□□□□□ -1.74
GTF3C1-201ENST00000356183 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
GTF3C1-201ENST00000356183 HECTD4Q9Y4D8 3996 aa4.15□□□□□ -1.75
GTF3C1-201ENST00000356183 LCE3BQ5TA77 95 aa4.09□□□□□ -1.76
GTF3C1-201ENST00000356183 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
GTF3C1-201ENST00000356183 HERC1Q15751 4861 aa4.08□□□□□ -1.76
GTF3C1-201ENST00000356183 MT2AP02795 61 aa4.07□□□□□ -1.76
GTF3C1-201ENST00000356183 RYR1P21817 5038 aa4.06□□□□□ -1.76
GTF3C1-201ENST00000356183 APOBP04114 4563 aaKnown RBP4.05□□□□□ -1.76
GTF3C1-201ENST00000356183 RYR2Q92736 4967 aa4.02□□□□□ -1.77
GTF3C1-201ENST00000356183 SPRR2EP22531 72 aa4.01□□□□□ -1.77
GTF3C1-201ENST00000356183 SPRR2BP35325 72 aa4.01□□□□□ -1.77
GTF3C1-201ENST00000356183 SPRR2AP35326 72 aa4.01□□□□□ -1.77
GTF3C1-201ENST00000356183 MT1FP04733 61 aa4.01□□□□□ -1.77
GTF3C1-201ENST00000356183 MYCBP2O75592 4640 aa4.01□□□□□ -1.77
GTF3C1-201ENST00000356183 FAT3Q8TDW7 4589 aa4□□□□□ -1.77
GTF3C1-201ENST00000356183 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
GTF3C1-201ENST00000356183 KIAA1109Q2LD37 5005 aa3.98□□□□□ -1.77
GTF3C1-201ENST00000356183 PKHD1P08F94 4074 aa3.96□□□□□ -1.78
GTF3C1-201ENST00000356183 RYR3Q15413 4870 aa3.95□□□□□ -1.78
GTF3C1-201ENST00000356183 KRTAP17-1Q9BYP8 105 aa3.95□□□□□ -1.78
GTF3C1-201ENST00000356183 LRP1Q07954 4544 aaKnown RBP3.95□□□□□ -1.78
GTF3C1-201ENST00000356183 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
GTF3C1-201ENST00000356183 MT1GP13640 62 aa3.93□□□□□ -1.78
GTF3C1-201ENST00000356183 HSPG2P98160 4391 aa3.91□□□□□ -1.78
GTF3C1-201ENST00000356183 LPAP08519 4548 aa3.88□□□□□ -1.79
GTF3C1-201ENST00000356183 SPRR2DP22532 72 aa3.87□□□□□ -1.79
GTF3C1-201ENST00000356183 KRTAP19-8Q3LI54 63 aa3.86□□□□□ -1.79
GTF3C1-201ENST00000356183 KRTAP19-1Q8IUB9 90 aa3.86□□□□□ -1.79
GTF3C1-201ENST00000356183 LCE2BO14633 110 aa3.78□□□□□ -1.8
GTF3C1-201ENST00000356183 LCE3DQ9BYE3 92 aa3.78□□□□□ -1.8
GTF3C1-201ENST00000356183 MT1XP80297 61 aa3.78□□□□□ -1.81
GTF3C1-201ENST00000356183 LRP2P98164 4655 aa3.74□□□□□ -1.81
GTF3C1-201ENST00000356183 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
GTF3C1-201ENST00000356183 KMT2CQ8NEZ4 4911 aaKnown RBP3.7□□□□□ -1.82
GTF3C1-201ENST00000356183 MT1BP07438 61 aa3.69□□□□□ -1.82
GTF3C1-201ENST00000356183 KRTAP4-8A0A0G2JLE6 195 aa3.69□□□□□ -1.82
GTF3C1-201ENST00000356183 KRTAP4-8Q9BYQ9 185 aa3.69□□□□□ -1.82
GTF3C1-201ENST00000356183 KRTAP9-8Q9BYQ0 159 aa3.68□□□□□ -1.82
GTF3C1-201ENST00000356183 PKD1P98161 4303 aa3.68□□□□□ -1.82
GTF3C1-201ENST00000356183 HYDINQ4G0P3 5121 aa3.66□□□□□ -1.82
GTF3C1-201ENST00000356183 BIRC6Q9NR09 4857 aa3.65□□□□□ -1.82
GTF3C1-201ENST00000356183 TNXBP22105 4242 aa3.64□□□□□ -1.83
GTF3C1-201ENST00000356183 LCE2CQ5TA81 110 aa3.62□□□□□ -1.83
GTF3C1-201ENST00000356183 PRM1P04553 51 aa3.62□□□□□ -1.83
GTF3C1-201ENST00000356183 PCLOQ9Y6V0 5065 aa3.61□□□□□ -1.83
GTF3C1-201ENST00000356183 PKHD1L1Q86WI1 4243 aa3.61□□□□□ -1.83
GTF3C1-201ENST00000356183 HERC2O95714 4834 aa3.58□□□□□ -1.84
GTF3C1-201ENST00000356183 KRTAP19-2Q3LHN2 52 aa3.58□□□□□ -1.84
GTF3C1-201ENST00000356183 KRTAP4-7Q9BYR0 210 aa3.58□□□□□ -1.84
GTF3C1-201ENST00000356183 LCE2DQ5TA82 110 aaPredicted RBP3.57□□□□□ -1.84
GTF3C1-201ENST00000356183 KRTAP9-3Q9BYQ3 159 aa3.57□□□□□ -1.84
GTF3C1-201ENST00000356183 ABCA13Q86UQ4 5058 aa3.55□□□□□ -1.84
GTF3C1-201ENST00000356183 MT4P47944 62 aa3.54□□□□□ -1.84
GTF3C1-201ENST00000356183 FLGP20930 4061 aaPredicted RBP3.53□□□□□ -1.84
GTF3C1-201ENST00000356183 MUC17Q685J3 4493 aa3.51□□□□□ -1.85
GTF3C1-201ENST00000356183 KRTAP9-6A0A140TA67 174 aa3.5□□□□□ -1.85
GTF3C1-201ENST00000356183 KRTAP9-2Q9BYQ4 174 aa3.46□□□□□ -1.86
GTF3C1-201ENST00000356183 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
GTF3C1-201ENST00000356183 KRTAP19-3Q7Z4W3 81 aa3.44□□□□□ -1.86
GTF3C1-201ENST00000356183 MT1LQ93083 61 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms