RNA–Protein interactions for RNA: ENST00000354353.9

KCNMA1-203, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-203ENST00000354353 ALMS1Q8TCU4 4167 aa3.31□□□□□ -1.88
KCNMA1-203ENST00000354353 VWFP04275 2813 aa3.29□□□□□ -1.88
KCNMA1-203ENST00000354353 KRTAP10-4P60372 401 aaPredicted RBP3.29□□□□□ -1.88
KCNMA1-203ENST00000354353 MT3P25713 68 aa3.29□□□□□ -1.88
KCNMA1-203ENST00000354353 DNAH9Q9NYC9 4486 aa3.25□□□□□ -1.89
KCNMA1-203ENST00000354353 FBN1P35555 2871 aaKnown RBP3.25□□□□□ -1.89
KCNMA1-203ENST00000354353 DNAH10Q8IVF4 4471 aa3.24□□□□□ -1.89
KCNMA1-203ENST00000354353 LORP23490 312 aaPredicted RBP3.23□□□□□ -1.89
KCNMA1-203ENST00000354353 KRTAP10-7P60409 375 aaPredicted RBP3.22□□□□□ -1.89
KCNMA1-203ENST00000354353 KRTAP19-4Q3LI73 84 aa3.22□□□□□ -1.89
KCNMA1-203ENST00000354353 DYNC2H1Q8NCM8 4307 aaKnown RBP3.22□□□□□ -1.89
KCNMA1-203ENST00000354353 FRAS1Q86XX4 4008 aa3.22□□□□□ -1.89
KCNMA1-203ENST00000354353 COL7A1Q02388 2944 aa3.21□□□□□ -1.9
KCNMA1-203ENST00000354353 DNAH7Q8WXX0 4024 aa3.2□□□□□ -1.9
KCNMA1-203ENST00000354353 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
KCNMA1-203ENST00000354353 DNAH6Q9C0G6 4158 aa3.18□□□□□ -1.9
KCNMA1-203ENST00000354353 PRKDCP78527 4128 aaKnown RBP3.17□□□□□ -1.9
KCNMA1-203ENST00000354353 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
KCNMA1-203ENST00000354353 SPRR5A0A1B0GTR4 108 aa3.16□□□□□ -1.9
KCNMA1-203ENST00000354353 HECTD4Q9Y4D8 3996 aa3.15□□□□□ -1.91
KCNMA1-203ENST00000354353 DNAH8Q96JB1 4490 aa3.14□□□□□ -1.91
KCNMA1-203ENST00000354353 VPS13DQ5THJ4 4388 aa3.14□□□□□ -1.91
KCNMA1-203ENST00000354353 FBN3Q75N90 2809 aa3.14□□□□□ -1.91
KCNMA1-203ENST00000354353 DNAH17Q9UFH2 4485 aa3.09□□□□□ -1.91
KCNMA1-203ENST00000354353 HUWE1Q7Z6Z7 4374 aaKnown RBP3.07□□□□□ -1.92
KCNMA1-203ENST00000354353 KRTAP8-1Q8IUC2 63 aa3.07□□□□□ -1.92
KCNMA1-203ENST00000354353 KMT2AQ03164 3969 aa3.06□□□□□ -1.92
KCNMA1-203ENST00000354353 MEGF8Q7Z7M0 2845 aa3.05□□□□□ -1.92
KCNMA1-203ENST00000354353 MT1HL1P0DM35 61 aa3.04□□□□□ -1.92
KCNMA1-203ENST00000354353 DNAH2Q9P225 4427 aa3.03□□□□□ -1.92
KCNMA1-203ENST00000354353 PLECQ15149 4684 aaKnown RBP3.01□□□□□ -1.93
KCNMA1-203ENST00000354353 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
KCNMA1-203ENST00000354353 KRTAP4-5Q9BYR2 181 aa2.98□□□□□ -1.93
KCNMA1-203ENST00000354353 DNAH11Q96DT5 4516 aa2.95□□□□□ -1.94
KCNMA1-203ENST00000354353 DNAH5Q8TE73 4624 aa2.95□□□□□ -1.94
KCNMA1-203ENST00000354353 STARD9Q9P2P6 4700 aa2.94□□□□□ -1.94
KCNMA1-203ENST00000354353 PKD1P98161 4303 aa2.94□□□□□ -1.94
KCNMA1-203ENST00000354353 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
KCNMA1-203ENST00000354353 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
KCNMA1-203ENST00000354353 LCE3BQ5TA77 95 aa2.92□□□□□ -1.94
KCNMA1-203ENST00000354353 FAT2Q9NYQ8 4349 aa2.91□□□□□ -1.94
KCNMA1-203ENST00000354353 LCE2DQ5TA82 110 aaPredicted RBP2.91□□□□□ -1.94
KCNMA1-203ENST00000354353 PKHD1L1Q86WI1 4243 aa2.88□□□□□ -1.95
KCNMA1-203ENST00000354353 PRM1P04553 51 aa2.87□□□□□ -1.95
KCNMA1-203ENST00000354353 SACSQ9NZJ4 4579 aa2.87□□□□□ -1.95
KCNMA1-203ENST00000354353 VPS13BQ7Z7G8 4022 aa2.87□□□□□ -1.95
KCNMA1-203ENST00000354353 LRP1BQ9NZR2 4599 aa2.86□□□□□ -1.95
KCNMA1-203ENST00000354353 SPRR2GQ9BYE4 73 aa2.85□□□□□ -1.95
KCNMA1-203ENST00000354353 PKHD1P08F94 4074 aa2.85□□□□□ -1.95
KCNMA1-203ENST00000354353 SPRR2FQ96RM1 72 aa2.81□□□□□ -1.96
KCNMA1-203ENST00000354353 TNXBP22105 4242 aa2.8□□□□□ -1.96
KCNMA1-203ENST00000354353 HYDINQ4G0P3 5121 aa2.76□□□□□ -1.97
KCNMA1-203ENST00000354353 APOBP04114 4563 aaKnown RBP2.76□□□□□ -1.97
KCNMA1-203ENST00000354353 MYCBP2O75592 4640 aa2.76□□□□□ -1.97
KCNMA1-203ENST00000354353 HSPG2P98160 4391 aa2.75□□□□□ -1.97
KCNMA1-203ENST00000354353 MT1HP80294 61 aa2.72□□□□□ -1.97
KCNMA1-203ENST00000354353 MT1GP13640 62 aa2.71□□□□□ -1.98
KCNMA1-203ENST00000354353 LRP1Q07954 4544 aaKnown RBP2.71□□□□□ -1.98
KCNMA1-203ENST00000354353 MT2AP02795 61 aa2.7□□□□□ -1.98
KCNMA1-203ENST00000354353 LOC100996750A0A140TA64 210 aa2.69□□□□□ -1.98
KCNMA1-203ENST00000354353 KRTAP4-6Q9BYQ5 205 aa2.69□□□□□ -1.98
KCNMA1-203ENST00000354353 KRTAP4-1Q9BYQ7 146 aa2.69□□□□□ -1.98
KCNMA1-203ENST00000354353 DYNC1H1Q14204 4646 aaKnown RBP2.66□□□□□ -1.98
KCNMA1-203ENST00000354353 FAT3Q8TDW7 4589 aa2.64□□□□□ -1.99
KCNMA1-203ENST00000354353 MT1FP04733 61 aa2.63□□□□□ -1.99
KCNMA1-203ENST00000354353 SPRR2EP22531 72 aa2.63□□□□□ -1.99
KCNMA1-203ENST00000354353 SPRR2BP35325 72 aa2.63□□□□□ -1.99
KCNMA1-203ENST00000354353 SPRR2AP35326 72 aa2.63□□□□□ -1.99
KCNMA1-203ENST00000354353 BIRC6Q9NR09 4857 aa2.63□□□□□ -1.99
KCNMA1-203ENST00000354353 LCE2CQ5TA81 110 aa2.61□□□□□ -1.99
KCNMA1-203ENST00000354353 FAT1Q14517 4588 aa2.6□□□□□ -1.99
KCNMA1-203ENST00000354353 DNHD1Q96M86 4753 aa2.57□□□□□ -2
KCNMA1-203ENST00000354353 LPAP08519 4548 aa2.56□□□□□ -2
KCNMA1-203ENST00000354353 SPRR2DP22532 72 aa2.55□□□□□ -2
KCNMA1-203ENST00000354353 MT1XP80297 61 aa2.53□□□□□ -2
KCNMA1-203ENST00000354353 RYR2Q92736 4967 aa2.53□□□□□ -2
KCNMA1-203ENST00000354353 KRTAP19-8Q3LI54 63 aa2.53□□□□□ -2.01
KCNMA1-203ENST00000354353 LCE2BO14633 110 aa2.51□□□□□ -2.01
KCNMA1-203ENST00000354353 MT1LQ93083 61 aa2.5□□□□□ -2.01
KCNMA1-203ENST00000354353 KRTAP2-3P0C7H8 128 aa2.48□□□□□ -2.01
KCNMA1-203ENST00000354353 KRTAP19-1Q8IUB9 90 aa2.48□□□□□ -2.01
KCNMA1-203ENST00000354353 KRTAP2-4Q9BYR9 128 aa2.48□□□□□ -2.01
KCNMA1-203ENST00000354353 KRTAP2-1Q9BYU5 128 aa2.48□□□□□ -2.01
KCNMA1-203ENST00000354353 KMT2CQ8NEZ4 4911 aaKnown RBP2.48□□□□□ -2.01
KCNMA1-203ENST00000354353 RYR3Q15413 4870 aa2.45□□□□□ -2.02
KCNMA1-203ENST00000354353 HERC2O95714 4834 aa2.45□□□□□ -2.02
KCNMA1-203ENST00000354353 KRTAP4-7Q9BYR0 210 aa2.44□□□□□ -2.02
KCNMA1-203ENST00000354353 MUC17Q685J3 4493 aa2.44□□□□□ -2.02
KCNMA1-203ENST00000354353 FLGP20930 4061 aaPredicted RBP2.43□□□□□ -2.02
KCNMA1-203ENST00000354353 RYR1P21817 5038 aa2.4□□□□□ -2.02
KCNMA1-203ENST00000354353 KRTAP4-8A0A0G2JLE6 195 aa2.4□□□□□ -2.03
KCNMA1-203ENST00000354353 KRTAP4-8Q9BYQ9 185 aa2.4□□□□□ -2.03
KCNMA1-203ENST00000354353 LRP2P98164 4655 aa2.4□□□□□ -2.03
KCNMA1-203ENST00000354353 HERC1Q15751 4861 aa2.38□□□□□ -2.03
KCNMA1-203ENST00000354353 SYNE1Q8NF91 8797 aaKnown RBP2.37□□□□□ -2.03
KCNMA1-203ENST00000354353 MT1EP04732 61 aa2.37□□□□□ -2.03
KCNMA1-203ENST00000354353 ABCA13Q86UQ4 5058 aa2.36□□□□□ -2.03
KCNMA1-203ENST00000354353 MT1BP07438 61 aa2.36□□□□□ -2.03
KCNMA1-203ENST00000354353 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
KCNMA1-203ENST00000354353 LCE1AQ5T7P2 110 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms