RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 DYNC1H1Q14204 4646 aaKnown RBP9.23□□□□□ -0.93
CTSB-202ENST00000353047 FAT2Q9NYQ8 4349 aa9.23□□□□□ -0.93
CTSB-202ENST00000353047 XP32Q5T750 250 aa9.23□□□□□ -0.93
CTSB-202ENST00000353047 M0QZ58 72 aa9.22□□□□□ -0.93
CTSB-202ENST00000353047 LRP1Q07954 4544 aaKnown RBP9.2□□□□□ -0.94
CTSB-202ENST00000353047 R4GN34 69 aa9.18□□□□□ -0.94
CTSB-202ENST00000353047 FAT3Q8TDW7 4589 aa9.17□□□□□ -0.94
CTSB-202ENST00000353047 KRTAP21-3Q3LHN1 58 aa9.16□□□□□ -0.94
CTSB-202ENST00000353047 TPRXLQ17RH7 258 aa9.16□□□□□ -0.94
CTSB-202ENST00000353047 KRTAP10-6P60371 365 aaPredicted RBP9.14□□□□□ -0.95
CTSB-202ENST00000353047 KRTAP12-2P59991 146 aa9.13□□□□□ -0.95
CTSB-202ENST00000353047 A0A1B0GVY2 172 aa9.05□□□□□ -0.96
CTSB-202ENST00000353047 KRTAP3-3Q9BYR6 98 aa9.05□□□□□ -0.96
CTSB-202ENST00000353047 SACSQ9NZJ4 4579 aa9.03□□□□□ -0.96
CTSB-202ENST00000353047 CAMK2N1Q7Z7J9 78 aa9.02□□□□□ -0.97
CTSB-202ENST00000353047 J3QL48 77 aa9.01□□□□□ -0.97
CTSB-202ENST00000353047 KRTAP10-4P60372 401 aaPredicted RBP8.99□□□□□ -0.97
CTSB-202ENST00000353047 APOBP04114 4563 aaKnown RBP8.99□□□□□ -0.97
CTSB-202ENST00000353047 KRTAP3-2Q9BYR7 98 aa8.97□□□□□ -0.97
CTSB-202ENST00000353047 PKD1P98161 4303 aa8.91□□□□□ -0.98
CTSB-202ENST00000353047 KRTAP12-1P59990 96 aa8.89□□□□□ -0.99
CTSB-202ENST00000353047 KIAA1109Q2LD37 5005 aa8.88□□□□□ -0.99
CTSB-202ENST00000353047 RYR1P21817 5038 aa8.82□□□□□ -1
CTSB-202ENST00000353047 KMT2CQ8NEZ4 4911 aaKnown RBP8.79□□□□□ -1
CTSB-202ENST00000353047 HSPG2P98160 4391 aa8.79□□□□□ -1
CTSB-202ENST00000353047 LRP2P98164 4655 aa8.78□□□□□ -1
CTSB-202ENST00000353047 LUZP6Q538Z0 58 aa8.71□□□□□ -1.01
CTSB-202ENST00000353047 SEC61BP60468 96 aaKnown RBP8.68□□□□□ -1.02
CTSB-202ENST00000353047 RYR3Q15413 4870 aa8.66□□□□□ -1.02
CTSB-202ENST00000353047 MT1HL1P0DM35 61 aa8.63□□□□□ -1.03
CTSB-202ENST00000353047 PLAC4Q8WY50 150 aa8.6□□□□□ -1.03
CTSB-202ENST00000353047 LPAP08519 4548 aa8.59□□□□□ -1.03
CTSB-202ENST00000353047 KRTAP17-1Q9BYP8 105 aa8.58□□□□□ -1.04
CTSB-202ENST00000353047 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
CTSB-202ENST00000353047 KRTAP4-5Q9BYR2 181 aa8.55□□□□□ -1.04
CTSB-202ENST00000353047 M0R2T5 61 aa8.54□□□□□ -1.04
CTSB-202ENST00000353047 KRTAP15-1Q3LI76 137 aa8.54□□□□□ -1.04
CTSB-202ENST00000353047 PKHD1L1Q86WI1 4243 aa8.49□□□□□ -1.05
CTSB-202ENST00000353047 RYR2Q92736 4967 aa8.47□□□□□ -1.05
CTSB-202ENST00000353047 EPPK1P58107 5090 aaKnown RBP8.33□□□□□ -1.08
CTSB-202ENST00000353047 MUC2Q02817 5179 aa8.29□□□□□ -1.08
CTSB-202ENST00000353047 A0A0A0MQY5 61 aa8.29□□□□□ -1.08
CTSB-202ENST00000353047 TNXBP22105 4242 aa8.26□□□□□ -1.09
CTSB-202ENST00000353047 ABCA13Q86UQ4 5058 aa8.25□□□□□ -1.09
CTSB-202ENST00000353047 TNP1P09430 55 aa8.25□□□□□ -1.09
CTSB-202ENST00000353047 KRTAP4-1Q9BYQ7 146 aa8.24□□□□□ -1.09
CTSB-202ENST00000353047 PP632Q6XCG6 107 aa8.06□□□□□ -1.12
CTSB-202ENST00000353047 HERC2O95714 4834 aa8□□□□□ -1.13
CTSB-202ENST00000353047 KRTAP10-10P60014 251 aa7.94□□□□□ -1.14
CTSB-202ENST00000353047 FAT4Q6V0I7 4981 aa7.91□□□□□ -1.14
CTSB-202ENST00000353047 RNF213Q63HN8 5207 aa7.79□□□□□ -1.16
CTSB-202ENST00000353047 HERC1Q15751 4861 aa7.72□□□□□ -1.17
CTSB-202ENST00000353047 LCE3AQ5TA76 89 aa7.63□□□□□ -1.19
CTSB-202ENST00000353047 MUC17Q685J3 4493 aa7.52□□□□□ -1.21
CTSB-202ENST00000353047 PCLOQ9Y6V0 5065 aa7.46□□□□□ -1.22
CTSB-202ENST00000353047 KRTAP19-2Q3LHN2 52 aa7.43□□□□□ -1.22
CTSB-202ENST00000353047 HMCN2Q8NDA2 5059 aa7.43□□□□□ -1.22
CTSB-202ENST00000353047 UBR4Q5T4S7 5183 aa7.43□□□□□ -1.22
CTSB-202ENST00000353047 FLGP20930 4061 aaPredicted RBP7.38□□□□□ -1.23
CTSB-202ENST00000353047 BIRC6Q9NR09 4857 aa7.34□□□□□ -1.23
CTSB-202ENST00000353047 KRTAP19-1Q8IUB9 90 aa7.33□□□□□ -1.24
CTSB-202ENST00000353047 MT1FP04733 61 aa7.32□□□□□ -1.24
CTSB-202ENST00000353047 MT1HP80294 61 aa7.27□□□□□ -1.25
CTSB-202ENST00000353047 KRTAP10-12P60413 245 aa7.27□□□□□ -1.25
CTSB-202ENST00000353047 KRTAP12-3P60328 96 aa7.26□□□□□ -1.25
CTSB-202ENST00000353047 MT2AP02795 61 aa7.25□□□□□ -1.25
CTSB-202ENST00000353047 SPRR2GQ9BYE4 73 aa7.23□□□□□ -1.25
CTSB-202ENST00000353047 LCE2CQ5TA81 110 aa7.18□□□□□ -1.26
CTSB-202ENST00000353047 FSIP2Q5CZC0 6907 aa7.15□□□□□ -1.26
CTSB-202ENST00000353047 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
CTSB-202ENST00000353047 USH2AO75445 5202 aa7.11□□□□□ -1.27
CTSB-202ENST00000353047 PRO2289Q9P1D8 64 aa7.1□□□□□ -1.27
CTSB-202ENST00000353047 KRTAP10-7P60409 375 aaPredicted RBP7.04□□□□□ -1.28
CTSB-202ENST00000353047 KMT2DO14686 5537 aa7.04□□□□□ -1.28
CTSB-202ENST00000353047 SPRR5A0A1B0GTR4 108 aa7□□□□□ -1.29
CTSB-202ENST00000353047 KRTAP9-8Q9BYQ0 159 aa6.95□□□□□ -1.3
CTSB-202ENST00000353047 MT1XP80297 61 aa6.94□□□□□ -1.3
CTSB-202ENST00000353047 KRTAP8-1Q8IUC2 63 aa6.94□□□□□ -1.3
CTSB-202ENST00000353047 KRTAP10-5P60370 271 aa6.93□□□□□ -1.3
CTSB-202ENST00000353047 MT1BP07438 61 aa6.91□□□□□ -1.3
CTSB-202ENST00000353047 KRTAP19-5Q3LI72 72 aa6.85□□□□□ -1.31
CTSB-202ENST00000353047 CRCT1Q9UGL9 99 aa6.82□□□□□ -1.32
CTSB-202ENST00000353047 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
CTSB-202ENST00000353047 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
CTSB-202ENST00000353047 INE1O15225 51 aa6.79□□□□□ -1.32
CTSB-202ENST00000353047 OBSCNQ5VST9 7968 aa6.77□□□□□ -1.33
CTSB-202ENST00000353047 KRTAP19-8Q3LI54 63 aa6.75□□□□□ -1.33
CTSB-202ENST00000353047 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
CTSB-202ENST00000353047 DSTQ03001 7570 aaKnown RBP6.63□□□□□ -1.35
CTSB-202ENST00000353047 KRTAP9-3Q9BYQ3 159 aa6.62□□□□□ -1.35
CTSB-202ENST00000353047 LCE3CQ5T5A8 94 aa6.62□□□□□ -1.35
CTSB-202ENST00000353047 SYNE1Q8NF91 8797 aaKnown RBP6.6□□□□□ -1.35
CTSB-202ENST00000353047 LCE2BO14633 110 aa6.52□□□□□ -1.37
CTSB-202ENST00000353047 FCGBPQ9Y6R7 5405 aaPredicted RBP6.52□□□□□ -1.37
CTSB-202ENST00000353047 KRTAP9-6A8MVA2 160 aa6.31□□□□□ -1.4
CTSB-202ENST00000353047 MUC12Q9UKN1 5478 aa6.22□□□□□ -1.41
CTSB-202ENST00000353047 LOC100996750A0A140TA64 210 aa6.19□□□□□ -1.42
CTSB-202ENST00000353047 KRTAP4-3Q9BYR4 195 aa6.19□□□□□ -1.42
CTSB-202ENST00000353047 MT1GP13640 62 aa6.17□□□□□ -1.42
CTSB-202ENST00000353047 KRTAP19-7Q3SYF9 63 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms