RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 MT1LQ93083 61 aa6.05□□□□□ -1.44
CTSB-202ENST00000353047 SYNE2Q8WXH0 6885 aaKnown RBP6.01□□□□□ -1.45
CTSB-202ENST00000353047 MT1EP04732 61 aa5.99□□□□□ -1.45
CTSB-202ENST00000353047 LCE2AQ5TA79 106 aaPredicted RBP5.98□□□□□ -1.45
CTSB-202ENST00000353047 SSPOA2VEC9 5147 aa5.96□□□□□ -1.46
CTSB-202ENST00000353047 KRTAP12-4P60329 112 aa5.96□□□□□ -1.46
CTSB-202ENST00000353047 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
CTSB-202ENST00000353047 SPRR2FQ96RM1 72 aa5.92□□□□□ -1.46
CTSB-202ENST00000353047 KRTAP2-3P0C7H8 128 aa5.82□□□□□ -1.48
CTSB-202ENST00000353047 KRTAP2-4Q9BYR9 128 aa5.82□□□□□ -1.48
CTSB-202ENST00000353047 KRTAP2-1Q9BYU5 128 aa5.82□□□□□ -1.48
CTSB-202ENST00000353047 KRTAP4-9Q9BYQ8 210 aa5.81□□□□□ -1.48
CTSB-202ENST00000353047 MT1MQ8N339 61 aa5.66□□□□□ -1.5
CTSB-202ENST00000353047 KRTAP19-3Q7Z4W3 81 aa5.64□□□□□ -1.51
CTSB-202ENST00000353047 LCE2DQ5TA82 110 aaPredicted RBP5.58□□□□□ -1.52
CTSB-202ENST00000353047 MACF1Q9UPN3 7388 aaKnown RBP5.55□□□□□ -1.52
CTSB-202ENST00000353047 KRTAP19-6Q3LI70 58 aa5.47□□□□□ -1.53
CTSB-202ENST00000353047 KRTAP9-2Q9BYQ4 174 aa5.45□□□□□ -1.54
CTSB-202ENST00000353047 MDN1Q9NU22 5596 aa5.43□□□□□ -1.54
CTSB-202ENST00000353047 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
CTSB-202ENST00000353047 LCE3DQ9BYE3 92 aa5.39□□□□□ -1.55
CTSB-202ENST00000353047 PRM1P04553 51 aa5.29□□□□□ -1.56
CTSB-202ENST00000353047 KRTAP6-1Q3LI64 71 aa5.29□□□□□ -1.56
CTSB-202ENST00000353047 LCE3EQ5T5B0 92 aa5.27□□□□□ -1.57
CTSB-202ENST00000353047 KRTAP9-7A8MTY7 169 aa5.26□□□□□ -1.57
CTSB-202ENST00000353047 SPRR2EP22531 72 aa5.23□□□□□ -1.57
CTSB-202ENST00000353047 SPRR2BP35325 72 aa5.23□□□□□ -1.57
CTSB-202ENST00000353047 SPRR2AP35326 72 aa5.23□□□□□ -1.57
CTSB-202ENST00000353047 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
CTSB-202ENST00000353047 MT1AP04731 61 aa4.99□□□□□ -1.61
CTSB-202ENST00000353047 SPRR2DP22532 72 aa4.98□□□□□ -1.61
CTSB-202ENST00000353047 KRTAP6-2Q3LI66 62 aa4.91□□□□□ -1.62
CTSB-202ENST00000353047 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
CTSB-202ENST00000353047 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
CTSB-202ENST00000353047 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
CTSB-202ENST00000353047 KRTAP5-5Q701N2 237 aaPredicted RBP4.75□□□□□ -1.65
CTSB-202ENST00000353047 MT4P47944 62 aa4.72□□□□□ -1.65
CTSB-202ENST00000353047 MT3P25713 68 aa4.71□□□□□ -1.66
CTSB-202ENST00000353047 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
CTSB-202ENST00000353047 KRTAP6-3Q3LI67 103 aa4.56□□□□□ -1.68
CTSB-202ENST00000353047 MUC19Q7Z5P9 8384 aa4.52□□□□□ -1.69
CTSB-202ENST00000353047 KRTAP5-9P26371 169 aa4.5□□□□□ -1.69
CTSB-202ENST00000353047 LCE1DQ5T752 114 aa4.48□□□□□ -1.69
CTSB-202ENST00000353047 LCE1BQ5T7P3 118 aa4.43□□□□□ -1.7
CTSB-202ENST00000353047 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.7
CTSB-202ENST00000353047 KRTAP4-6Q9BYQ5 205 aa4.35□□□□□ -1.71
CTSB-202ENST00000353047 NEBP20929 6669 aa4.2□□□□□ -1.74
CTSB-202ENST00000353047 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
CTSB-202ENST00000353047 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
CTSB-202ENST00000353047 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
CTSB-202ENST00000353047 LCE1EQ5T753 118 aa4□□□□□ -1.77
CTSB-202ENST00000353047 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
CTSB-202ENST00000353047 LCE4AQ5TA78 99 aa3.95□□□□□ -1.78
CTSB-202ENST00000353047 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
CTSB-202ENST00000353047 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
CTSB-202ENST00000353047 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
CTSB-202ENST00000353047 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
CTSB-202ENST00000353047 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
CTSB-202ENST00000353047 KRTAP4-2Q9BYR5 136 aa3.44□□□□□ -1.86
CTSB-202ENST00000353047 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
CTSB-202ENST00000353047 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
CTSB-202ENST00000353047 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.87
CTSB-202ENST00000353047 KRTAP5-3Q6L8H2 238 aa3.39□□□□□ -1.87
CTSB-202ENST00000353047 AHNAK2Q8IVF2 5795 aa3.31□□□□□ -1.88
CTSB-202ENST00000353047 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
CTSB-202ENST00000353047 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
CTSB-202ENST00000353047 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
CTSB-202ENST00000353047 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
CTSB-202ENST00000353047 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
CTSB-202ENST00000353047 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
CTSB-202ENST00000353047 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
CTSB-202ENST00000353047 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
CTSB-202ENST00000353047 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
CTSB-202ENST00000353047 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
CTSB-202ENST00000353047 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
CTSB-202ENST00000353047 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
CTSB-202ENST00000353047 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms