RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 ALMS1Q8TCU4 4167 aa6.48□□□□□ -1.37
PTPRO-202ENST00000348962 INE1O15225 51 aa6.46□□□□□ -1.38
PTPRO-202ENST00000348962 DNAH5Q8TE73 4624 aa6.45□□□□□ -1.38
PTPRO-202ENST00000348962 PLECQ15149 4684 aaKnown RBP6.43□□□□□ -1.38
PTPRO-202ENST00000348962 MT1HP80294 61 aa6.37□□□□□ -1.39
PTPRO-202ENST00000348962 DNHD1Q96M86 4753 aa6.36□□□□□ -1.39
PTPRO-202ENST00000348962 DNAH9Q9NYC9 4486 aa6.34□□□□□ -1.39
PTPRO-202ENST00000348962 CSMD3Q7Z407 3707 aa6.34□□□□□ -1.39
PTPRO-202ENST00000348962 KRTAP4-1Q9BYQ7 146 aa6.34□□□□□ -1.39
PTPRO-202ENST00000348962 ZNF469Q96JG9 3925 aaPredicted RBP6.33□□□□□ -1.4
PTPRO-202ENST00000348962 DNAH11Q96DT5 4516 aa6.29□□□□□ -1.4
PTPRO-202ENST00000348962 MT2AP02795 61 aa6.28□□□□□ -1.4
PTPRO-202ENST00000348962 AKAP9Q99996 3911 aa6.23□□□□□ -1.41
PTPRO-202ENST00000348962 DNAH1Q9P2D7 4330 aa6.21□□□□□ -1.42
PTPRO-202ENST00000348962 DNAH10Q8IVF4 4471 aa6.2□□□□□ -1.42
PTPRO-202ENST00000348962 KRTAP10-5P60370 271 aa6.19□□□□□ -1.42
PTPRO-202ENST00000348962 SPRR2GQ9BYE4 73 aa6.19□□□□□ -1.42
PTPRO-202ENST00000348962 FAT1Q14517 4588 aa6.19□□□□□ -1.42
PTPRO-202ENST00000348962 RYR1P21817 5038 aa6.14□□□□□ -1.43
PTPRO-202ENST00000348962 MT1FP04733 61 aa6.11□□□□□ -1.43
PTPRO-202ENST00000348962 SPRR2FQ96RM1 72 aa6.09□□□□□ -1.43
PTPRO-202ENST00000348962 DYNC1H1Q14204 4646 aaKnown RBP6.09□□□□□ -1.44
PTPRO-202ENST00000348962 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
PTPRO-202ENST00000348962 VPS13DQ5THJ4 4388 aa5.99□□□□□ -1.45
PTPRO-202ENST00000348962 DNAH2Q9P225 4427 aa5.99□□□□□ -1.45
PTPRO-202ENST00000348962 LRP1BQ9NZR2 4599 aa5.97□□□□□ -1.45
PTPRO-202ENST00000348962 SACSQ9NZJ4 4579 aa5.95□□□□□ -1.46
PTPRO-202ENST00000348962 DNAH17Q9UFH2 4485 aa5.95□□□□□ -1.46
PTPRO-202ENST00000348962 STARD9Q9P2P6 4700 aa5.91□□□□□ -1.46
PTPRO-202ENST00000348962 KRTAP19-5Q3LI72 72 aa5.89□□□□□ -1.47
PTPRO-202ENST00000348962 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
PTPRO-202ENST00000348962 DNAH8Q96JB1 4490 aa5.87□□□□□ -1.47
PTPRO-202ENST00000348962 PRKDCP78527 4128 aaKnown RBP5.82□□□□□ -1.48
PTPRO-202ENST00000348962 KIAA1109Q2LD37 5005 aa5.81□□□□□ -1.48
PTPRO-202ENST00000348962 FAT2Q9NYQ8 4349 aa5.81□□□□□ -1.48
PTPRO-202ENST00000348962 RYR3Q15413 4870 aa5.78□□□□□ -1.48
PTPRO-202ENST00000348962 KRTAP19-8Q3LI54 63 aa5.77□□□□□ -1.49
PTPRO-202ENST00000348962 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
PTPRO-202ENST00000348962 DYNC2H1Q8NCM8 4307 aaKnown RBP5.74□□□□□ -1.49
PTPRO-202ENST00000348962 APOBP04114 4563 aaKnown RBP5.73□□□□□ -1.49
PTPRO-202ENST00000348962 SPRR2EP22531 72 aa5.72□□□□□ -1.49
PTPRO-202ENST00000348962 SPRR2BP35325 72 aa5.72□□□□□ -1.49
PTPRO-202ENST00000348962 SPRR2AP35326 72 aa5.72□□□□□ -1.49
PTPRO-202ENST00000348962 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
PTPRO-202ENST00000348962 KRTAP17-1Q9BYP8 105 aa5.66□□□□□ -1.5
PTPRO-202ENST00000348962 MYCBP2O75592 4640 aa5.66□□□□□ -1.5
PTPRO-202ENST00000348962 VPS13BQ7Z7G8 4022 aa5.64□□□□□ -1.51
PTPRO-202ENST00000348962 LYSTQ99698 3801 aa5.62□□□□□ -1.51
PTPRO-202ENST00000348962 KMT2AQ03164 3969 aa5.62□□□□□ -1.51
PTPRO-202ENST00000348962 LRP1Q07954 4544 aaKnown RBP5.61□□□□□ -1.51
PTPRO-202ENST00000348962 FAT3Q8TDW7 4589 aa5.6□□□□□ -1.51
PTPRO-202ENST00000348962 DNAH3Q8TD57 4116 aa5.6□□□□□ -1.51
PTPRO-202ENST00000348962 ANK2Q01484 3957 aa5.59□□□□□ -1.51
PTPRO-202ENST00000348962 RYR2Q92736 4967 aa5.58□□□□□ -1.52
PTPRO-202ENST00000348962 SPRR2DP22532 72 aa5.55□□□□□ -1.52
PTPRO-202ENST00000348962 KRTAP9-8Q9BYQ0 159 aa5.54□□□□□ -1.52
PTPRO-202ENST00000348962 MT1XP80297 61 aa5.54□□□□□ -1.52
PTPRO-202ENST00000348962 MT1BP07438 61 aa5.53□□□□□ -1.52
PTPRO-202ENST00000348962 LCE2BO14633 110 aa5.52□□□□□ -1.53
PTPRO-202ENST00000348962 HERC2O95714 4834 aa5.52□□□□□ -1.53
PTPRO-202ENST00000348962 BIRC6Q9NR09 4857 aa5.5□□□□□ -1.53
PTPRO-202ENST00000348962 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
PTPRO-202ENST00000348962 HERC1Q15751 4861 aa5.45□□□□□ -1.54
PTPRO-202ENST00000348962 PCLOQ9Y6V0 5065 aa5.45□□□□□ -1.54
PTPRO-202ENST00000348962 MT1GP13640 62 aa5.44□□□□□ -1.54
PTPRO-202ENST00000348962 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
PTPRO-202ENST00000348962 LCE2CQ5TA81 110 aa5.42□□□□□ -1.54
PTPRO-202ENST00000348962 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
PTPRO-202ENST00000348962 KRTAP4-8A0A0G2JLE6 195 aa5.35□□□□□ -1.55
PTPRO-202ENST00000348962 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
PTPRO-202ENST00000348962 EPPK1P58107 5090 aaKnown RBP5.34□□□□□ -1.56
PTPRO-202ENST00000348962 DNAH6Q9C0G6 4158 aa5.32□□□□□ -1.56
PTPRO-202ENST00000348962 CMYA5Q8N3K9 4069 aa5.32□□□□□ -1.56
PTPRO-202ENST00000348962 PKD1P98161 4303 aa5.32□□□□□ -1.56
PTPRO-202ENST00000348962 LRP2P98164 4655 aa5.3□□□□□ -1.56
PTPRO-202ENST00000348962 HYDINQ4G0P3 5121 aa5.27□□□□□ -1.57
PTPRO-202ENST00000348962 HSPG2P98160 4391 aa5.25□□□□□ -1.57
PTPRO-202ENST00000348962 DNAH7Q8WXX0 4024 aa5.23□□□□□ -1.57
PTPRO-202ENST00000348962 KRTAP19-3Q7Z4W3 81 aa5.2□□□□□ -1.58
PTPRO-202ENST00000348962 FRAS1Q86XX4 4008 aa5.2□□□□□ -1.58
PTPRO-202ENST00000348962 HECTD4Q9Y4D8 3996 aa5.17□□□□□ -1.58
PTPRO-202ENST00000348962 LCE3DQ9BYE3 92 aa5.11□□□□□ -1.59
PTPRO-202ENST00000348962 KRTAP19-2Q3LHN2 52 aa5.1□□□□□ -1.59
PTPRO-202ENST00000348962 LCE2DQ5TA82 110 aaPredicted RBP5.1□□□□□ -1.59
PTPRO-202ENST00000348962 PKHD1P08F94 4074 aa5.1□□□□□ -1.59
PTPRO-202ENST00000348962 KRTAP9-2Q9BYQ4 174 aa5.09□□□□□ -1.59
PTPRO-202ENST00000348962 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.59
PTPRO-202ENST00000348962 PKHD1L1Q86WI1 4243 aa5.09□□□□□ -1.59
PTPRO-202ENST00000348962 MT1LQ93083 61 aa5.06□□□□□ -1.6
PTPRO-202ENST00000348962 MT1EP04732 61 aa5.04□□□□□ -1.6
PTPRO-202ENST00000348962 KRTAP19-6Q3LI70 58 aa5.04□□□□□ -1.6
PTPRO-202ENST00000348962 LCE3EQ5T5B0 92 aa5.02□□□□□ -1.61
PTPRO-202ENST00000348962 ABCA13Q86UQ4 5058 aa5.01□□□□□ -1.61
PTPRO-202ENST00000348962 KMT2CQ8NEZ4 4911 aaKnown RBP5□□□□□ -1.61
PTPRO-202ENST00000348962 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
PTPRO-202ENST00000348962 LPAP08519 4548 aa4.99□□□□□ -1.61
PTPRO-202ENST00000348962 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
PTPRO-202ENST00000348962 UBR4Q5T4S7 5183 aa4.92□□□□□ -1.62
PTPRO-202ENST00000348962 MT1MQ8N339 61 aa4.91□□□□□ -1.62
PTPRO-202ENST00000348962 MT3P25713 68 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms