RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 DNHD1Q96M86 4753 aa8.11□□□□□ -1.11
UBE3C-201ENST00000348165 CRCT1Q9UGL9 99 aa8.07□□□□□ -1.12
UBE3C-201ENST00000348165 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
UBE3C-201ENST00000348165 PLECQ15149 4684 aaKnown RBP8.04□□□□□ -1.12
UBE3C-201ENST00000348165 ALMS1Q8TCU4 4167 aa7.98□□□□□ -1.13
UBE3C-201ENST00000348165 KRTAP12-3P60328 96 aa7.96□□□□□ -1.13
UBE3C-201ENST00000348165 DNAH1Q9P2D7 4330 aa7.93□□□□□ -1.14
UBE3C-201ENST00000348165 DNAH11Q96DT5 4516 aa7.92□□□□□ -1.14
UBE3C-201ENST00000348165 LCE3AQ5TA76 89 aa7.89□□□□□ -1.15
UBE3C-201ENST00000348165 DNAH10Q8IVF4 4471 aa7.84□□□□□ -1.15
UBE3C-201ENST00000348165 KRTAP23-1A1A580 65 aa7.84□□□□□ -1.16
UBE3C-201ENST00000348165 KRTAP4-1Q9BYQ7 146 aa7.83□□□□□ -1.16
UBE3C-201ENST00000348165 FAT1Q14517 4588 aa7.78□□□□□ -1.16
UBE3C-201ENST00000348165 RYR1P21817 5038 aa7.76□□□□□ -1.17
UBE3C-201ENST00000348165 VPS13DQ5THJ4 4388 aa7.75□□□□□ -1.17
UBE3C-201ENST00000348165 DYNC1H1Q14204 4646 aaKnown RBP7.73□□□□□ -1.17
UBE3C-201ENST00000348165 STARD9Q9P2P6 4700 aa7.71□□□□□ -1.18
UBE3C-201ENST00000348165 DNAH17Q9UFH2 4485 aa7.7□□□□□ -1.18
UBE3C-201ENST00000348165 MT1HP80294 61 aa7.64□□□□□ -1.19
UBE3C-201ENST00000348165 KRTAP8-1Q8IUC2 63 aa7.64□□□□□ -1.19
UBE3C-201ENST00000348165 LRP1BQ9NZR2 4599 aa7.63□□□□□ -1.19
UBE3C-201ENST00000348165 DNAH8Q96JB1 4490 aa7.58□□□□□ -1.2
UBE3C-201ENST00000348165 MT2AP02795 61 aa7.55□□□□□ -1.2
UBE3C-201ENST00000348165 DNAH2Q9P225 4427 aa7.55□□□□□ -1.2
UBE3C-201ENST00000348165 PRKDCP78527 4128 aaKnown RBP7.55□□□□□ -1.2
UBE3C-201ENST00000348165 DNAH3Q8TD57 4116 aa7.54□□□□□ -1.2
UBE3C-201ENST00000348165 SACSQ9NZJ4 4579 aa7.53□□□□□ -1.2
UBE3C-201ENST00000348165 ANK2Q01484 3957 aa7.51□□□□□ -1.21
UBE3C-201ENST00000348165 KMT2AQ03164 3969 aa7.45□□□□□ -1.22
UBE3C-201ENST00000348165 KIAA1109Q2LD37 5005 aa7.41□□□□□ -1.22
UBE3C-201ENST00000348165 MT1FP04733 61 aa7.41□□□□□ -1.22
UBE3C-201ENST00000348165 SPRR2GQ9BYE4 73 aa7.41□□□□□ -1.22
UBE3C-201ENST00000348165 DYNC2H1Q8NCM8 4307 aaKnown RBP7.39□□□□□ -1.23
UBE3C-201ENST00000348165 KRTAP10-5P60370 271 aa7.38□□□□□ -1.23
UBE3C-201ENST00000348165 CMYA5Q8N3K9 4069 aa7.38□□□□□ -1.23
UBE3C-201ENST00000348165 FAT2Q9NYQ8 4349 aa7.37□□□□□ -1.23
UBE3C-201ENST00000348165 APOBP04114 4563 aaKnown RBP7.33□□□□□ -1.24
UBE3C-201ENST00000348165 MYCBP2O75592 4640 aa7.32□□□□□ -1.24
UBE3C-201ENST00000348165 VPS13BQ7Z7G8 4022 aa7.27□□□□□ -1.25
UBE3C-201ENST00000348165 RYR3Q15413 4870 aa7.26□□□□□ -1.25
UBE3C-201ENST00000348165 LYSTQ99698 3801 aa7.26□□□□□ -1.25
UBE3C-201ENST00000348165 KRTAP17-1Q9BYP8 105 aa7.23□□□□□ -1.25
UBE3C-201ENST00000348165 SPRR2FQ96RM1 72 aa7.16□□□□□ -1.26
UBE3C-201ENST00000348165 FRAS1Q86XX4 4008 aa7.16□□□□□ -1.26
UBE3C-201ENST00000348165 KRTAP19-5Q3LI72 72 aa7.14□□□□□ -1.27
UBE3C-201ENST00000348165 DNAH6Q9C0G6 4158 aa7.1□□□□□ -1.27
UBE3C-201ENST00000348165 HECTD4Q9Y4D8 3996 aa7.09□□□□□ -1.27
UBE3C-201ENST00000348165 DNAH7Q8WXX0 4024 aa7.08□□□□□ -1.28
UBE3C-201ENST00000348165 FAT3Q8TDW7 4589 aa7.08□□□□□ -1.28
UBE3C-201ENST00000348165 LRP1Q07954 4544 aaKnown RBP7.06□□□□□ -1.28
UBE3C-201ENST00000348165 KRTAP10-7P60409 375 aaPredicted RBP6.99□□□□□ -1.29
UBE3C-201ENST00000348165 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
UBE3C-201ENST00000348165 RYR2Q92736 4967 aa6.96□□□□□ -1.3
UBE3C-201ENST00000348165 HERC2O95714 4834 aa6.95□□□□□ -1.3
UBE3C-201ENST00000348165 HYDINQ4G0P3 5121 aa6.94□□□□□ -1.3
UBE3C-201ENST00000348165 LCE3CQ5T5A8 94 aa6.93□□□□□ -1.3
UBE3C-201ENST00000348165 KRTAP19-8Q3LI54 63 aa6.9□□□□□ -1.31
UBE3C-201ENST00000348165 LRP2P98164 4655 aa6.81□□□□□ -1.32
UBE3C-201ENST00000348165 PCLOQ9Y6V0 5065 aa6.78□□□□□ -1.32
UBE3C-201ENST00000348165 MT1XP80297 61 aa6.76□□□□□ -1.33
UBE3C-201ENST00000348165 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
UBE3C-201ENST00000348165 PKHD1P08F94 4074 aa6.74□□□□□ -1.33
UBE3C-201ENST00000348165 MT1BP07438 61 aa6.73□□□□□ -1.33
UBE3C-201ENST00000348165 BIRC6Q9NR09 4857 aa6.72□□□□□ -1.33
UBE3C-201ENST00000348165 HSPG2P98160 4391 aa6.69□□□□□ -1.34
UBE3C-201ENST00000348165 LCE2CQ5TA81 110 aa6.67□□□□□ -1.34
UBE3C-201ENST00000348165 SPRR2EP22531 72 aa6.66□□□□□ -1.34
UBE3C-201ENST00000348165 SPRR2BP35325 72 aa6.66□□□□□ -1.34
UBE3C-201ENST00000348165 SPRR2AP35326 72 aa6.66□□□□□ -1.34
UBE3C-201ENST00000348165 KRTAP19-4Q3LI73 84 aa6.66□□□□□ -1.34
UBE3C-201ENST00000348165 PKD1P98161 4303 aa6.63□□□□□ -1.35
UBE3C-201ENST00000348165 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
UBE3C-201ENST00000348165 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
UBE3C-201ENST00000348165 SPRR5A0A1B0GTR4 108 aa6.61□□□□□ -1.35
UBE3C-201ENST00000348165 HERC1Q15751 4861 aa6.59□□□□□ -1.35
UBE3C-201ENST00000348165 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
UBE3C-201ENST00000348165 EPPK1P58107 5090 aaKnown RBP6.52□□□□□ -1.37
UBE3C-201ENST00000348165 MT1GP13640 62 aa6.52□□□□□ -1.37
UBE3C-201ENST00000348165 LCE3BQ5TA77 95 aa6.49□□□□□ -1.37
UBE3C-201ENST00000348165 LPAP08519 4548 aa6.46□□□□□ -1.38
UBE3C-201ENST00000348165 KMT2CQ8NEZ4 4911 aaKnown RBP6.45□□□□□ -1.38
UBE3C-201ENST00000348165 SPRR2DP22532 72 aa6.43□□□□□ -1.38
UBE3C-201ENST00000348165 LCE2BO14633 110 aa6.41□□□□□ -1.38
UBE3C-201ENST00000348165 KRTAP12-4P60329 112 aa6.4□□□□□ -1.38
UBE3C-201ENST00000348165 TNXBP22105 4242 aa6.36□□□□□ -1.39
UBE3C-201ENST00000348165 PKHD1L1Q86WI1 4243 aa6.34□□□□□ -1.39
UBE3C-201ENST00000348165 KRTAP19-2Q3LHN2 52 aa6.34□□□□□ -1.39
UBE3C-201ENST00000348165 ABCA13Q86UQ4 5058 aa6.33□□□□□ -1.4
UBE3C-201ENST00000348165 SYNE1Q8NF91 8797 aaKnown RBP6.32□□□□□ -1.4
UBE3C-201ENST00000348165 FSIP2Q5CZC0 6907 aa6.24□□□□□ -1.41
UBE3C-201ENST00000348165 KRTAP4-7Q9BYR0 210 aa6.2□□□□□ -1.42
UBE3C-201ENST00000348165 UBR4Q5T4S7 5183 aa6.19□□□□□ -1.42
UBE3C-201ENST00000348165 MUC17Q685J3 4493 aa6.18□□□□□ -1.42
UBE3C-201ENST00000348165 KRTAP19-3Q7Z4W3 81 aa6.17□□□□□ -1.42
UBE3C-201ENST00000348165 MT1LQ93083 61 aa6.12□□□□□ -1.43
UBE3C-201ENST00000348165 MT1EP04732 61 aa6.08□□□□□ -1.44
UBE3C-201ENST00000348165 LCE3DQ9BYE3 92 aa6.06□□□□□ -1.44
UBE3C-201ENST00000348165 FLGP20930 4061 aaPredicted RBP6.05□□□□□ -1.44
UBE3C-201ENST00000348165 FAT4Q6V0I7 4981 aa5.99□□□□□ -1.45
UBE3C-201ENST00000348165 RNF213Q63HN8 5207 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms