RNA–Protein interactions for RNA: ENST00000345016.9

AP3D1-201, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AP3D1, Length 4,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-201ENST00000345016 ANK2Q01484 3957 aa7.32□□□□□ -1.24
AP3D1-201ENST00000345016 KRTAP10-12P60413 245 aa7.31□□□□□ -1.24
AP3D1-201ENST00000345016 KRTAP10-4P60372 401 aaPredicted RBP7.31□□□□□ -1.24
AP3D1-201ENST00000345016 DNAH11Q96DT5 4516 aa7.29□□□□□ -1.24
AP3D1-201ENST00000345016 STARD9Q9P2P6 4700 aa7.27□□□□□ -1.25
AP3D1-201ENST00000345016 KRTAP4-5Q9BYR2 181 aa7.22□□□□□ -1.25
AP3D1-201ENST00000345016 VPS13DQ5THJ4 4388 aa7.22□□□□□ -1.25
AP3D1-201ENST00000345016 KRTAP12-3P60328 96 aa7.22□□□□□ -1.25
AP3D1-201ENST00000345016 LORP23490 312 aaPredicted RBP7.21□□□□□ -1.25
AP3D1-201ENST00000345016 DNAH17Q9UFH2 4485 aa7.16□□□□□ -1.26
AP3D1-201ENST00000345016 PRKDCP78527 4128 aaKnown RBP7.16□□□□□ -1.26
AP3D1-201ENST00000345016 KRTAP23-1A1A580 65 aa7.15□□□□□ -1.26
AP3D1-201ENST00000345016 DNAH5Q8TE73 4624 aa7.15□□□□□ -1.26
AP3D1-201ENST00000345016 LYSTQ99698 3801 aa7.15□□□□□ -1.26
AP3D1-201ENST00000345016 LCE3AQ5TA76 89 aa7.15□□□□□ -1.27
AP3D1-201ENST00000345016 CRCT1Q9UGL9 99 aa7.14□□□□□ -1.27
AP3D1-201ENST00000345016 CMYA5Q8N3K9 4069 aa7.13□□□□□ -1.27
AP3D1-201ENST00000345016 KMT2AQ03164 3969 aa7.11□□□□□ -1.27
AP3D1-201ENST00000345016 DNAH3Q8TD57 4116 aa7.11□□□□□ -1.27
AP3D1-201ENST00000345016 DNAH8Q96JB1 4490 aa7.11□□□□□ -1.27
AP3D1-201ENST00000345016 LRP1BQ9NZR2 4599 aa7.05□□□□□ -1.28
AP3D1-201ENST00000345016 DNAH2Q9P225 4427 aa7.05□□□□□ -1.28
AP3D1-201ENST00000345016 ALMS1Q8TCU4 4167 aa7.01□□□□□ -1.29
AP3D1-201ENST00000345016 FAT1Q14517 4588 aa7□□□□□ -1.29
AP3D1-201ENST00000345016 DNAH7Q8WXX0 4024 aa6.98□□□□□ -1.29
AP3D1-201ENST00000345016 FRAS1Q86XX4 4008 aa6.96□□□□□ -1.3
AP3D1-201ENST00000345016 DYNC1H1Q14204 4646 aaKnown RBP6.93□□□□□ -1.3
AP3D1-201ENST00000345016 DYNC2H1Q8NCM8 4307 aaKnown RBP6.89□□□□□ -1.31
AP3D1-201ENST00000345016 DNAH6Q9C0G6 4158 aa6.85□□□□□ -1.31
AP3D1-201ENST00000345016 RYR1P21817 5038 aa6.85□□□□□ -1.31
AP3D1-201ENST00000345016 HECTD4Q9Y4D8 3996 aa6.84□□□□□ -1.31
AP3D1-201ENST00000345016 VPS13BQ7Z7G8 4022 aa6.84□□□□□ -1.32
AP3D1-201ENST00000345016 MYCBP2O75592 4640 aa6.8□□□□□ -1.32
AP3D1-201ENST00000345016 KRTAP10-5P60370 271 aa6.75□□□□□ -1.33
AP3D1-201ENST00000345016 SACSQ9NZJ4 4579 aa6.74□□□□□ -1.33
AP3D1-201ENST00000345016 KIAA1109Q2LD37 5005 aa6.7□□□□□ -1.34
AP3D1-201ENST00000345016 KRTAP4-1Q9BYQ7 146 aa6.7□□□□□ -1.34
AP3D1-201ENST00000345016 FAT2Q9NYQ8 4349 aa6.7□□□□□ -1.34
AP3D1-201ENST00000345016 HYDINQ4G0P3 5121 aa6.66□□□□□ -1.34
AP3D1-201ENST00000345016 FAT3Q8TDW7 4589 aa6.6□□□□□ -1.35
AP3D1-201ENST00000345016 LRP1Q07954 4544 aaKnown RBP6.58□□□□□ -1.36
AP3D1-201ENST00000345016 APOBP04114 4563 aaKnown RBP6.56□□□□□ -1.36
AP3D1-201ENST00000345016 KRTAP8-1Q8IUC2 63 aa6.55□□□□□ -1.36
AP3D1-201ENST00000345016 PKHD1P08F94 4074 aa6.54□□□□□ -1.36
AP3D1-201ENST00000345016 SPRR2GQ9BYE4 73 aa6.51□□□□□ -1.37
AP3D1-201ENST00000345016 RYR3Q15413 4870 aa6.51□□□□□ -1.37
AP3D1-201ENST00000345016 MT2AP02795 61 aa6.47□□□□□ -1.37
AP3D1-201ENST00000345016 KRTAP17-1Q9BYP8 105 aa6.47□□□□□ -1.37
AP3D1-201ENST00000345016 MT1HP80294 61 aa6.44□□□□□ -1.38
AP3D1-201ENST00000345016 PKD1P98161 4303 aa6.37□□□□□ -1.39
AP3D1-201ENST00000345016 RYR2Q92736 4967 aa6.37□□□□□ -1.39
AP3D1-201ENST00000345016 MT1FP04733 61 aa6.35□□□□□ -1.39
AP3D1-201ENST00000345016 KRTAP19-5Q3LI72 72 aa6.34□□□□□ -1.39
AP3D1-201ENST00000345016 LCE3CQ5T5A8 94 aa6.3□□□□□ -1.4
AP3D1-201ENST00000345016 LRP2P98164 4655 aa6.26□□□□□ -1.41
AP3D1-201ENST00000345016 KMT2CQ8NEZ4 4911 aaKnown RBP6.24□□□□□ -1.41
AP3D1-201ENST00000345016 HSPG2P98160 4391 aa6.21□□□□□ -1.41
AP3D1-201ENST00000345016 HERC2O95714 4834 aa6.18□□□□□ -1.42
AP3D1-201ENST00000345016 KRTAP19-1Q8IUB9 90 aa6.13□□□□□ -1.43
AP3D1-201ENST00000345016 KRTAP10-7P60409 375 aaPredicted RBP6.08□□□□□ -1.44
AP3D1-201ENST00000345016 LPAP08519 4548 aa6.07□□□□□ -1.44
AP3D1-201ENST00000345016 SPRR2FQ96RM1 72 aa6.07□□□□□ -1.44
AP3D1-201ENST00000345016 PKHD1L1Q86WI1 4243 aa6.04□□□□□ -1.44
AP3D1-201ENST00000345016 TNXBP22105 4242 aa6.02□□□□□ -1.45
AP3D1-201ENST00000345016 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
AP3D1-201ENST00000345016 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
AP3D1-201ENST00000345016 PCLOQ9Y6V0 5065 aa6□□□□□ -1.45
AP3D1-201ENST00000345016 SPRR5A0A1B0GTR4 108 aa5.98□□□□□ -1.45
AP3D1-201ENST00000345016 MT1XP80297 61 aa5.93□□□□□ -1.46
AP3D1-201ENST00000345016 KRTAP12-4P60329 112 aa5.89□□□□□ -1.47
AP3D1-201ENST00000345016 EPPK1P58107 5090 aaKnown RBP5.88□□□□□ -1.47
AP3D1-201ENST00000345016 SYNE1Q8NF91 8797 aaKnown RBP5.85□□□□□ -1.47
AP3D1-201ENST00000345016 MT1BP07438 61 aa5.84□□□□□ -1.47
AP3D1-201ENST00000345016 LCE3BQ5TA77 95 aa5.83□□□□□ -1.48
AP3D1-201ENST00000345016 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
AP3D1-201ENST00000345016 ABCA13Q86UQ4 5058 aa5.76□□□□□ -1.49
AP3D1-201ENST00000345016 KRTAP4-8A0A0G2JLE6 195 aa5.76□□□□□ -1.49
AP3D1-201ENST00000345016 MT1GP13640 62 aa5.76□□□□□ -1.49
AP3D1-201ENST00000345016 KRTAP4-8Q9BYQ9 185 aa5.76□□□□□ -1.49
AP3D1-201ENST00000345016 BIRC6Q9NR09 4857 aa5.74□□□□□ -1.49
AP3D1-201ENST00000345016 KRTAP9-8Q9BYQ0 159 aa5.73□□□□□ -1.49
AP3D1-201ENST00000345016 HERC1Q15751 4861 aa5.68□□□□□ -1.5
AP3D1-201ENST00000345016 KRTAP19-2Q3LHN2 52 aa5.68□□□□□ -1.5
AP3D1-201ENST00000345016 LCE2CQ5TA81 110 aa5.66□□□□□ -1.5
AP3D1-201ENST00000345016 MUC17Q685J3 4493 aa5.59□□□□□ -1.51
AP3D1-201ENST00000345016 UBR4Q5T4S7 5183 aa5.59□□□□□ -1.51
AP3D1-201ENST00000345016 KRTAP9-3Q9BYQ3 159 aa5.57□□□□□ -1.52
AP3D1-201ENST00000345016 LCE3DQ9BYE3 92 aa5.56□□□□□ -1.52
AP3D1-201ENST00000345016 FLGP20930 4061 aaPredicted RBP5.54□□□□□ -1.52
AP3D1-201ENST00000345016 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
AP3D1-201ENST00000345016 MUC2Q02817 5179 aa5.53□□□□□ -1.52
AP3D1-201ENST00000345016 SPRR2EP22531 72 aa5.53□□□□□ -1.52
AP3D1-201ENST00000345016 SPRR2BP35325 72 aa5.53□□□□□ -1.52
AP3D1-201ENST00000345016 SPRR2AP35326 72 aa5.53□□□□□ -1.52
AP3D1-201ENST00000345016 RNF213Q63HN8 5207 aa5.51□□□□□ -1.53
AP3D1-201ENST00000345016 LCE3EQ5T5B0 92 aa5.49□□□□□ -1.53
AP3D1-201ENST00000345016 MT1LQ93083 61 aa5.4□□□□□ -1.55
AP3D1-201ENST00000345016 LCE2BO14633 110 aa5.39□□□□□ -1.55
AP3D1-201ENST00000345016 OBSCNQ5VST9 7968 aa5.38□□□□□ -1.55
AP3D1-201ENST00000345016 FAT4Q6V0I7 4981 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms