RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 COL7A1Q02388 2944 aa6.31□□□□□ -1.4
CUL3-202ENST00000344951 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
CUL3-202ENST00000344951 CSMD3Q7Z407 3707 aa6.29□□□□□ -1.4
CUL3-202ENST00000344951 ALMS1Q8TCU4 4167 aa6.27□□□□□ -1.41
CUL3-202ENST00000344951 AKAP9Q99996 3911 aa6.22□□□□□ -1.41
CUL3-202ENST00000344951 DNAH1Q9P2D7 4330 aa6.08□□□□□ -1.44
CUL3-202ENST00000344951 DNAH9Q9NYC9 4486 aa6.08□□□□□ -1.44
CUL3-202ENST00000344951 SPRR2FQ96RM1 72 aa6.06□□□□□ -1.44
CUL3-202ENST00000344951 DNAH10Q8IVF4 4471 aa5.99□□□□□ -1.45
CUL3-202ENST00000344951 KRTAP10-7P60409 375 aaPredicted RBP5.99□□□□□ -1.45
CUL3-202ENST00000344951 DNAH5Q8TE73 4624 aa5.99□□□□□ -1.45
CUL3-202ENST00000344951 KRTAP4-1Q9BYQ7 146 aa5.95□□□□□ -1.46
CUL3-202ENST00000344951 DNAH2Q9P225 4427 aa5.94□□□□□ -1.46
CUL3-202ENST00000344951 PLECQ15149 4684 aaKnown RBP5.93□□□□□ -1.46
CUL3-202ENST00000344951 ZNF469Q96JG9 3925 aaPredicted RBP5.92□□□□□ -1.46
CUL3-202ENST00000344951 DNAH11Q96DT5 4516 aa5.92□□□□□ -1.46
CUL3-202ENST00000344951 DNAH17Q9UFH2 4485 aa5.88□□□□□ -1.47
CUL3-202ENST00000344951 MT1HP80294 61 aa5.86□□□□□ -1.47
CUL3-202ENST00000344951 KRTAP19-5Q3LI72 72 aa5.86□□□□□ -1.47
CUL3-202ENST00000344951 DNAH8Q96JB1 4490 aa5.85□□□□□ -1.47
CUL3-202ENST00000344951 DNAH3Q8TD57 4116 aa5.84□□□□□ -1.47
CUL3-202ENST00000344951 VPS13DQ5THJ4 4388 aa5.79□□□□□ -1.48
CUL3-202ENST00000344951 SPRR2EP22531 72 aa5.75□□□□□ -1.49
CUL3-202ENST00000344951 SPRR2BP35325 72 aa5.75□□□□□ -1.49
CUL3-202ENST00000344951 SPRR2AP35326 72 aa5.75□□□□□ -1.49
CUL3-202ENST00000344951 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
CUL3-202ENST00000344951 SPRR2GQ9BYE4 73 aa5.72□□□□□ -1.49
CUL3-202ENST00000344951 MT2AP02795 61 aa5.72□□□□□ -1.49
CUL3-202ENST00000344951 ANK2Q01484 3957 aa5.71□□□□□ -1.49
CUL3-202ENST00000344951 SACSQ9NZJ4 4579 aa5.67□□□□□ -1.5
CUL3-202ENST00000344951 LCE3CQ5T5A8 94 aa5.66□□□□□ -1.5
CUL3-202ENST00000344951 LRP1BQ9NZR2 4599 aa5.65□□□□□ -1.5
CUL3-202ENST00000344951 STARD9Q9P2P6 4700 aa5.65□□□□□ -1.5
CUL3-202ENST00000344951 DYNC1H1Q14204 4646 aaKnown RBP5.64□□□□□ -1.51
CUL3-202ENST00000344951 MT1FP04733 61 aa5.63□□□□□ -1.51
CUL3-202ENST00000344951 FAT1Q14517 4588 aa5.62□□□□□ -1.51
CUL3-202ENST00000344951 FAT2Q9NYQ8 4349 aa5.62□□□□□ -1.51
CUL3-202ENST00000344951 DYNC2H1Q8NCM8 4307 aaKnown RBP5.61□□□□□ -1.51
CUL3-202ENST00000344951 FRAS1Q86XX4 4008 aa5.57□□□□□ -1.52
CUL3-202ENST00000344951 SPRR2DP22532 72 aa5.54□□□□□ -1.52
CUL3-202ENST00000344951 VPS13BQ7Z7G8 4022 aa5.52□□□□□ -1.53
CUL3-202ENST00000344951 MT1GP13640 62 aa5.5□□□□□ -1.53
CUL3-202ENST00000344951 KMT2AQ03164 3969 aa5.5□□□□□ -1.53
CUL3-202ENST00000344951 APOBP04114 4563 aaKnown RBP5.48□□□□□ -1.53
CUL3-202ENST00000344951 PRKDCP78527 4128 aaKnown RBP5.45□□□□□ -1.54
CUL3-202ENST00000344951 CMYA5Q8N3K9 4069 aa5.44□□□□□ -1.54
CUL3-202ENST00000344951 DNAH7Q8WXX0 4024 aa5.4□□□□□ -1.54
CUL3-202ENST00000344951 LCE2BO14633 110 aa5.39□□□□□ -1.55
CUL3-202ENST00000344951 DNAH6Q9C0G6 4158 aa5.38□□□□□ -1.55
CUL3-202ENST00000344951 RYR1P21817 5038 aa5.37□□□□□ -1.55
CUL3-202ENST00000344951 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
CUL3-202ENST00000344951 DNHD1Q96M86 4753 aa5.35□□□□□ -1.55
CUL3-202ENST00000344951 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
CUL3-202ENST00000344951 LYSTQ99698 3801 aa5.3□□□□□ -1.56
CUL3-202ENST00000344951 HECTD4Q9Y4D8 3996 aa5.28□□□□□ -1.56
CUL3-202ENST00000344951 MT1XP80297 61 aa5.25□□□□□ -1.57
CUL3-202ENST00000344951 KRTAP19-8Q3LI54 63 aa5.25□□□□□ -1.57
CUL3-202ENST00000344951 KRTAP17-1Q9BYP8 105 aa5.23□□□□□ -1.57
CUL3-202ENST00000344951 FAT3Q8TDW7 4589 aa5.22□□□□□ -1.57
CUL3-202ENST00000344951 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
CUL3-202ENST00000344951 KRTAP4-8Q9BYQ9 185 aa5.22□□□□□ -1.57
CUL3-202ENST00000344951 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
CUL3-202ENST00000344951 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
CUL3-202ENST00000344951 MYCBP2O75592 4640 aa5.19□□□□□ -1.58
CUL3-202ENST00000344951 RYR3Q15413 4870 aa5.17□□□□□ -1.58
CUL3-202ENST00000344951 LCE3DQ9BYE3 92 aa5.15□□□□□ -1.59
CUL3-202ENST00000344951 LCE2CQ5TA81 110 aa5.14□□□□□ -1.59
CUL3-202ENST00000344951 MT1BP07438 61 aa5.13□□□□□ -1.59
CUL3-202ENST00000344951 MT4P47944 62 aa5.11□□□□□ -1.59
CUL3-202ENST00000344951 LCE2DQ5TA82 110 aaPredicted RBP5.1□□□□□ -1.59
CUL3-202ENST00000344951 LRP1Q07954 4544 aaKnown RBP5.08□□□□□ -1.6
CUL3-202ENST00000344951 KRTAP9-8Q9BYQ0 159 aa5.03□□□□□ -1.6
CUL3-202ENST00000344951 LCE3EQ5T5B0 92 aa5.03□□□□□ -1.6
CUL3-202ENST00000344951 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
CUL3-202ENST00000344951 LCE1BQ5T7P3 118 aa4.98□□□□□ -1.61
CUL3-202ENST00000344951 RYR2Q92736 4967 aa4.94□□□□□ -1.62
CUL3-202ENST00000344951 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
CUL3-202ENST00000344951 LPAP08519 4548 aa4.91□□□□□ -1.62
CUL3-202ENST00000344951 HSPG2P98160 4391 aa4.88□□□□□ -1.63
CUL3-202ENST00000344951 PKD1P98161 4303 aa4.88□□□□□ -1.63
CUL3-202ENST00000344951 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
CUL3-202ENST00000344951 HERC1Q15751 4861 aa4.87□□□□□ -1.63
CUL3-202ENST00000344951 HYDINQ4G0P3 5121 aa4.86□□□□□ -1.63
CUL3-202ENST00000344951 PRM1P04553 51 aa4.83□□□□□ -1.64
CUL3-202ENST00000344951 KIAA1109Q2LD37 5005 aa4.83□□□□□ -1.64
CUL3-202ENST00000344951 LRP2P98164 4655 aa4.82□□□□□ -1.64
CUL3-202ENST00000344951 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
CUL3-202ENST00000344951 PKHD1L1Q86WI1 4243 aa4.79□□□□□ -1.64
CUL3-202ENST00000344951 KRTAP19-3Q7Z4W3 81 aa4.77□□□□□ -1.65
CUL3-202ENST00000344951 MT1LQ93083 61 aa4.77□□□□□ -1.65
CUL3-202ENST00000344951 TNXBP22105 4242 aa4.76□□□□□ -1.65
CUL3-202ENST00000344951 PKHD1P08F94 4074 aa4.73□□□□□ -1.65
CUL3-202ENST00000344951 MT1EP04732 61 aa4.7□□□□□ -1.66
CUL3-202ENST00000344951 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
CUL3-202ENST00000344951 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
CUL3-202ENST00000344951 HERC2O95714 4834 aa4.66□□□□□ -1.66
CUL3-202ENST00000344951 KRTAP19-2Q3LHN2 52 aa4.65□□□□□ -1.66
CUL3-202ENST00000344951 MT3P25713 68 aa4.64□□□□□ -1.67
CUL3-202ENST00000344951 KMT2CQ8NEZ4 4911 aaKnown RBP4.62□□□□□ -1.67
CUL3-202ENST00000344951 FLGP20930 4061 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms