RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 KRTAP15-1Q3LI76 137 aa8.92□□□□□ -0.98
SOX12-201ENST00000342665 ALMS1Q8TCU4 4167 aa8.89□□□□□ -0.99
SOX12-201ENST00000342665 DNHD1Q96M86 4753 aa8.85□□□□□ -0.99
SOX12-201ENST00000342665 DNAH10Q8IVF4 4471 aa8.83□□□□□ -1
SOX12-201ENST00000342665 VPS13DQ5THJ4 4388 aa8.8□□□□□ -1
SOX12-201ENST00000342665 LORP23490 312 aaPredicted RBP8.77□□□□□ -1.01
SOX12-201ENST00000342665 DNAH17Q9UFH2 4485 aa8.76□□□□□ -1.01
SOX12-201ENST00000342665 KRTAP10-12P60413 245 aa8.69□□□□□ -1.02
SOX12-201ENST00000342665 KRTAP23-1A1A580 65 aa8.68□□□□□ -1.02
SOX12-201ENST00000342665 DYNC1H1Q14204 4646 aaKnown RBP8.64□□□□□ -1.03
SOX12-201ENST00000342665 FAT1Q14517 4588 aa8.63□□□□□ -1.03
SOX12-201ENST00000342665 STARD9Q9P2P6 4700 aa8.6□□□□□ -1.03
SOX12-201ENST00000342665 LRP1BQ9NZR2 4599 aa8.56□□□□□ -1.04
SOX12-201ENST00000342665 DNAH2Q9P225 4427 aa8.52□□□□□ -1.04
SOX12-201ENST00000342665 KRTAP12-3P60328 96 aa8.52□□□□□ -1.05
SOX12-201ENST00000342665 KRTAP4-1Q9BYQ7 146 aa8.52□□□□□ -1.05
SOX12-201ENST00000342665 DNAH8Q96JB1 4490 aa8.47□□□□□ -1.05
SOX12-201ENST00000342665 LCE3AQ5TA76 89 aa8.47□□□□□ -1.05
SOX12-201ENST00000342665 PRKDCP78527 4128 aaKnown RBP8.43□□□□□ -1.06
SOX12-201ENST00000342665 RYR1P21817 5038 aa8.42□□□□□ -1.06
SOX12-201ENST00000342665 DYNC2H1Q8NCM8 4307 aaKnown RBP8.39□□□□□ -1.07
SOX12-201ENST00000342665 INE1O15225 51 aa8.38□□□□□ -1.07
SOX12-201ENST00000342665 SACSQ9NZJ4 4579 aa8.37□□□□□ -1.07
SOX12-201ENST00000342665 DNAH3Q8TD57 4116 aa8.34□□□□□ -1.07
SOX12-201ENST00000342665 KMT2AQ03164 3969 aa8.33□□□□□ -1.08
SOX12-201ENST00000342665 FAT2Q9NYQ8 4349 aa8.3□□□□□ -1.08
SOX12-201ENST00000342665 LYSTQ99698 3801 aa8.29□□□□□ -1.08
SOX12-201ENST00000342665 ANK2Q01484 3957 aa8.24□□□□□ -1.09
SOX12-201ENST00000342665 MYCBP2O75592 4640 aa8.22□□□□□ -1.09
SOX12-201ENST00000342665 KIAA1109Q2LD37 5005 aa8.2□□□□□ -1.1
SOX12-201ENST00000342665 MT1HP80294 61 aa8.19□□□□□ -1.1
SOX12-201ENST00000342665 SPRR2GQ9BYE4 73 aa8.19□□□□□ -1.1
SOX12-201ENST00000342665 APOBP04114 4563 aaKnown RBP8.18□□□□□ -1.1
SOX12-201ENST00000342665 MT2AP02795 61 aa8.14□□□□□ -1.11
SOX12-201ENST00000342665 VPS13BQ7Z7G8 4022 aa8.14□□□□□ -1.11
SOX12-201ENST00000342665 CRCT1Q9UGL9 99 aa8.07□□□□□ -1.12
SOX12-201ENST00000342665 RYR3Q15413 4870 aa8.01□□□□□ -1.13
SOX12-201ENST00000342665 KRTAP17-1Q9BYP8 105 aa8□□□□□ -1.13
SOX12-201ENST00000342665 FRAS1Q86XX4 4008 aa8□□□□□ -1.13
SOX12-201ENST00000342665 MT1FP04733 61 aa7.99□□□□□ -1.13
SOX12-201ENST00000342665 LRP1Q07954 4544 aaKnown RBP7.96□□□□□ -1.14
SOX12-201ENST00000342665 DNAH6Q9C0G6 4158 aa7.95□□□□□ -1.14
SOX12-201ENST00000342665 FAT3Q8TDW7 4589 aa7.93□□□□□ -1.14
SOX12-201ENST00000342665 CMYA5Q8N3K9 4069 aa7.92□□□□□ -1.14
SOX12-201ENST00000342665 DNAH7Q8WXX0 4024 aa7.88□□□□□ -1.15
SOX12-201ENST00000342665 KRTAP8-1Q8IUC2 63 aa7.88□□□□□ -1.15
SOX12-201ENST00000342665 HECTD4Q9Y4D8 3996 aa7.86□□□□□ -1.15
SOX12-201ENST00000342665 RYR2Q92736 4967 aa7.84□□□□□ -1.15
SOX12-201ENST00000342665 KRTAP19-1Q8IUB9 90 aa7.75□□□□□ -1.17
SOX12-201ENST00000342665 HYDINQ4G0P3 5121 aa7.72□□□□□ -1.17
SOX12-201ENST00000342665 KRTAP19-8Q3LI54 63 aa7.67□□□□□ -1.18
SOX12-201ENST00000342665 LRP2P98164 4655 aa7.63□□□□□ -1.19
SOX12-201ENST00000342665 KRTAP19-5Q3LI72 72 aa7.63□□□□□ -1.19
SOX12-201ENST00000342665 PKHD1P08F94 4074 aa7.63□□□□□ -1.19
SOX12-201ENST00000342665 KRTAP10-5P60370 271 aa7.61□□□□□ -1.19
SOX12-201ENST00000342665 HERC2O95714 4834 aa7.61□□□□□ -1.19
SOX12-201ENST00000342665 LCE3CQ5T5A8 94 aa7.53□□□□□ -1.2
SOX12-201ENST00000342665 KRTAP19-4Q3LI73 84 aa7.49□□□□□ -1.21
SOX12-201ENST00000342665 KRTAP10-7P60409 375 aaPredicted RBP7.46□□□□□ -1.22
SOX12-201ENST00000342665 KRTAP9-8Q9BYQ0 159 aa7.43□□□□□ -1.22
SOX12-201ENST00000342665 MT1XP80297 61 aa7.43□□□□□ -1.22
SOX12-201ENST00000342665 HSPG2P98160 4391 aa7.43□□□□□ -1.22
SOX12-201ENST00000342665 LCE2CQ5TA81 110 aa7.42□□□□□ -1.22
SOX12-201ENST00000342665 MT1BP07438 61 aa7.42□□□□□ -1.22
SOX12-201ENST00000342665 PKD1P98161 4303 aa7.36□□□□□ -1.23
SOX12-201ENST00000342665 KMT2CQ8NEZ4 4911 aaKnown RBP7.32□□□□□ -1.24
SOX12-201ENST00000342665 SPRR2FQ96RM1 72 aa7.32□□□□□ -1.24
SOX12-201ENST00000342665 BIRC6Q9NR09 4857 aa7.29□□□□□ -1.24
SOX12-201ENST00000342665 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
SOX12-201ENST00000342665 PCLOQ9Y6V0 5065 aa7.24□□□□□ -1.25
SOX12-201ENST00000342665 HERC1Q15751 4861 aa7.24□□□□□ -1.25
SOX12-201ENST00000342665 LPAP08519 4548 aa7.23□□□□□ -1.25
SOX12-201ENST00000342665 KRTAP19-2Q3LHN2 52 aa7.22□□□□□ -1.25
SOX12-201ENST00000342665 KRTAP9-3Q9BYQ3 159 aa7.22□□□□□ -1.25
SOX12-201ENST00000342665 MUC17Q685J3 4493 aa7.08□□□□□ -1.28
SOX12-201ENST00000342665 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
SOX12-201ENST00000342665 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
SOX12-201ENST00000342665 PKHD1L1Q86WI1 4243 aa7□□□□□ -1.29
SOX12-201ENST00000342665 TNXBP22105 4242 aa6.99□□□□□ -1.29
SOX12-201ENST00000342665 EPPK1P58107 5090 aaKnown RBP6.94□□□□□ -1.3
SOX12-201ENST00000342665 FLGP20930 4061 aaPredicted RBP6.92□□□□□ -1.3
SOX12-201ENST00000342665 ABCA13Q86UQ4 5058 aa6.92□□□□□ -1.3
SOX12-201ENST00000342665 LCE2BO14633 110 aa6.88□□□□□ -1.31
SOX12-201ENST00000342665 MT1GP13640 62 aa6.88□□□□□ -1.31
SOX12-201ENST00000342665 LCE3BQ5TA77 95 aa6.75□□□□□ -1.33
SOX12-201ENST00000342665 SPRR2EP22531 72 aa6.75□□□□□ -1.33
SOX12-201ENST00000342665 SPRR2BP35325 72 aa6.75□□□□□ -1.33
SOX12-201ENST00000342665 SPRR2AP35326 72 aa6.75□□□□□ -1.33
SOX12-201ENST00000342665 KRTAP12-4P60329 112 aa6.72□□□□□ -1.33
SOX12-201ENST00000342665 MT1LQ93083 61 aa6.69□□□□□ -1.34
SOX12-201ENST00000342665 FSIP2Q5CZC0 6907 aa6.66□□□□□ -1.34
SOX12-201ENST00000342665 UBR4Q5T4S7 5183 aa6.65□□□□□ -1.34
SOX12-201ENST00000342665 MT1EP04732 61 aa6.65□□□□□ -1.34
SOX12-201ENST00000342665 KRTAP19-3Q7Z4W3 81 aa6.64□□□□□ -1.35
SOX12-201ENST00000342665 KRTAP4-7Q9BYR0 210 aa6.64□□□□□ -1.35
SOX12-201ENST00000342665 FAT4Q6V0I7 4981 aa6.6□□□□□ -1.35
SOX12-201ENST00000342665 SYNE1Q8NF91 8797 aaKnown RBP6.59□□□□□ -1.35
SOX12-201ENST00000342665 RNF213Q63HN8 5207 aa6.56□□□□□ -1.36
SOX12-201ENST00000342665 MUC2Q02817 5179 aa6.54□□□□□ -1.36
SOX12-201ENST00000342665 HMCN2Q8NDA2 5059 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 860.3 ms