RNA–Protein interactions for RNA: ENST00000342183.9

NRXN1-202, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-202ENST00000342183 KRTAP10-1P60331 282 aa10.22□□□□□ -0.77
NRXN1-202ENST00000342183 KRTAP12-1P59990 96 aa10.13□□□□□ -0.79
NRXN1-202ENST00000342183 XP32Q5T750 250 aa10.1□□□□□ -0.79
NRXN1-202ENST00000342183 PLAC4Q8WY50 150 aa10.02□□□□□ -0.81
NRXN1-202ENST00000342183 KRTAP10-8P60410 259 aa9.99□□□□□ -0.81
NRXN1-202ENST00000342183 SMR3BP02814 79 aaPredicted RBP9.97□□□□□ -0.81
NRXN1-202ENST00000342183 PKHD1P08F94 4074 aa9.94□□□□□ -0.82
NRXN1-202ENST00000342183 PKD1P98161 4303 aa9.88□□□□□ -0.83
NRXN1-202ENST00000342183 MYCBP2O75592 4640 aa9.86□□□□□ -0.83
NRXN1-202ENST00000342183 FAT1Q14517 4588 aa9.86□□□□□ -0.83
NRXN1-202ENST00000342183 KRTAP21-3Q3LHN1 58 aa9.83□□□□□ -0.84
NRXN1-202ENST00000342183 HYDINQ4G0P3 5121 aa9.83□□□□□ -0.84
NRXN1-202ENST00000342183 APOBP04114 4563 aaKnown RBP9.83□□□□□ -0.84
NRXN1-202ENST00000342183 HSPG2P98160 4391 aa9.8□□□□□ -0.84
NRXN1-202ENST00000342183 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
NRXN1-202ENST00000342183 SACSQ9NZJ4 4579 aa9.74□□□□□ -0.85
NRXN1-202ENST00000342183 DYNC1H1Q14204 4646 aaKnown RBP9.7□□□□□ -0.86
NRXN1-202ENST00000342183 LRP1Q07954 4544 aaKnown RBP9.64□□□□□ -0.87
NRXN1-202ENST00000342183 M0QZ58 72 aa9.61□□□□□ -0.87
NRXN1-202ENST00000342183 LPAP08519 4548 aa9.59□□□□□ -0.87
NRXN1-202ENST00000342183 KMT2CQ8NEZ4 4911 aaKnown RBP9.57□□□□□ -0.88
NRXN1-202ENST00000342183 PKHD1L1Q86WI1 4243 aa9.55□□□□□ -0.88
NRXN1-202ENST00000342183 FAT3Q8TDW7 4589 aa9.47□□□□□ -0.89
NRXN1-202ENST00000342183 SEC61BP60468 96 aaKnown RBP9.46□□□□□ -0.89
NRXN1-202ENST00000342183 R4GN34 69 aa9.46□□□□□ -0.9
NRXN1-202ENST00000342183 RYR3Q15413 4870 aa9.4□□□□□ -0.9
NRXN1-202ENST00000342183 LORP23490 312 aaPredicted RBP9.33□□□□□ -0.92
NRXN1-202ENST00000342183 RYR2Q92736 4967 aa9.3□□□□□ -0.92
NRXN1-202ENST00000342183 KRTAP10-4P60372 401 aaPredicted RBP9.25□□□□□ -0.93
NRXN1-202ENST00000342183 LRP2P98164 4655 aa9.22□□□□□ -0.93
NRXN1-202ENST00000342183 CAMK2N1Q7Z7J9 78 aa9.18□□□□□ -0.94
NRXN1-202ENST00000342183 TNXBP22105 4242 aa9.14□□□□□ -0.95
NRXN1-202ENST00000342183 PP632Q6XCG6 107 aa9.08□□□□□ -0.96
NRXN1-202ENST00000342183 EPPK1P58107 5090 aaKnown RBP9.06□□□□□ -0.96
NRXN1-202ENST00000342183 PRO2289Q9P1D8 64 aa8.95□□□□□ -0.98
NRXN1-202ENST00000342183 SPRR5A0A1B0GTR4 108 aa8.84□□□□□ -0.99
NRXN1-202ENST00000342183 RYR1P21817 5038 aa8.83□□□□□ -1
NRXN1-202ENST00000342183 KIAA1109Q2LD37 5005 aa8.79□□□□□ -1
NRXN1-202ENST00000342183 TNP1P09430 55 aa8.74□□□□□ -1.01
NRXN1-202ENST00000342183 A0A1B0GVY2 172 aa8.72□□□□□ -1.01
NRXN1-202ENST00000342183 Q5VSD8 79 aa8.69□□□□□ -1.02
NRXN1-202ENST00000342183 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
NRXN1-202ENST00000342183 ABCA13Q86UQ4 5058 aa8.52□□□□□ -1.05
NRXN1-202ENST00000342183 BIRC6Q9NR09 4857 aa8.52□□□□□ -1.05
NRXN1-202ENST00000342183 INE1O15225 51 aa8.5□□□□□ -1.05
NRXN1-202ENST00000342183 MT1HL1P0DM35 61 aa8.49□□□□□ -1.05
NRXN1-202ENST00000342183 MUC2Q02817 5179 aa8.43□□□□□ -1.06
NRXN1-202ENST00000342183 MUC17Q685J3 4493 aa8.42□□□□□ -1.06
NRXN1-202ENST00000342183 KRTAP4-1Q9BYQ7 146 aa8.41□□□□□ -1.06
NRXN1-202ENST00000342183 PCLOQ9Y6V0 5065 aa8.38□□□□□ -1.07
NRXN1-202ENST00000342183 HERC2O95714 4834 aa8.37□□□□□ -1.07
NRXN1-202ENST00000342183 KRTAP4-5Q9BYR2 181 aa8.37□□□□□ -1.07
NRXN1-202ENST00000342183 LCE3AQ5TA76 89 aa8.32□□□□□ -1.08
NRXN1-202ENST00000342183 KRTAP23-1A1A580 65 aa8.29□□□□□ -1.08
NRXN1-202ENST00000342183 J3QL48 77 aa8.23□□□□□ -1.09
NRXN1-202ENST00000342183 HERC1Q15751 4861 aa8.17□□□□□ -1.1
NRXN1-202ENST00000342183 KRTAP19-2Q3LHN2 52 aa8.08□□□□□ -1.12
NRXN1-202ENST00000342183 FLGP20930 4061 aaPredicted RBP8.02□□□□□ -1.13
NRXN1-202ENST00000342183 FAT4Q6V0I7 4981 aa7.95□□□□□ -1.14
NRXN1-202ENST00000342183 KRTAP8-1Q8IUC2 63 aa7.8□□□□□ -1.16
NRXN1-202ENST00000342183 KRTAP10-12P60413 245 aa7.79□□□□□ -1.16
NRXN1-202ENST00000342183 HMCN2Q8NDA2 5059 aa7.78□□□□□ -1.16
NRXN1-202ENST00000342183 KRTAP12-3P60328 96 aa7.78□□□□□ -1.16
NRXN1-202ENST00000342183 KRTAP19-1Q8IUB9 90 aa7.75□□□□□ -1.17
NRXN1-202ENST00000342183 UBR4Q5T4S7 5183 aa7.72□□□□□ -1.17
NRXN1-202ENST00000342183 KRTAP10-10P60014 251 aa7.69□□□□□ -1.18
NRXN1-202ENST00000342183 RNF213Q63HN8 5207 aa7.66□□□□□ -1.18
NRXN1-202ENST00000342183 SPRR2GQ9BYE4 73 aa7.63□□□□□ -1.19
NRXN1-202ENST00000342183 M0R2T5 61 aa7.54□□□□□ -1.2
NRXN1-202ENST00000342183 KRTAP10-7P60409 375 aaPredicted RBP7.44□□□□□ -1.22
NRXN1-202ENST00000342183 KRTAP10-5P60370 271 aa7.42□□□□□ -1.22
NRXN1-202ENST00000342183 KMT2DO14686 5537 aa7.4□□□□□ -1.23
NRXN1-202ENST00000342183 MT1XP80297 61 aa7.38□□□□□ -1.23
NRXN1-202ENST00000342183 KRTAP9-6A8MVA2 160 aa7.35□□□□□ -1.23
NRXN1-202ENST00000342183 MT1FP04733 61 aa7.34□□□□□ -1.24
NRXN1-202ENST00000342183 LCE3CQ5T5A8 94 aa7.31□□□□□ -1.24
NRXN1-202ENST00000342183 LCE2CQ5TA81 110 aa7.28□□□□□ -1.24
NRXN1-202ENST00000342183 KRTAP19-5Q3LI72 72 aa7.24□□□□□ -1.25
NRXN1-202ENST00000342183 MT2AP02795 61 aa7.21□□□□□ -1.26
NRXN1-202ENST00000342183 MT1BP07438 61 aa7.19□□□□□ -1.26
NRXN1-202ENST00000342183 KRTAP4-7Q9BYR0 210 aa7.16□□□□□ -1.26
NRXN1-202ENST00000342183 KRTAP2-3P0C7H8 128 aa7.09□□□□□ -1.28
NRXN1-202ENST00000342183 KRTAP2-4Q9BYR9 128 aa7.09□□□□□ -1.28
NRXN1-202ENST00000342183 KRTAP2-1Q9BYU5 128 aa7.09□□□□□ -1.28
NRXN1-202ENST00000342183 KRTAP19-8Q3LI54 63 aa7.06□□□□□ -1.28
NRXN1-202ENST00000342183 MT1HP80294 61 aa7.05□□□□□ -1.28
NRXN1-202ENST00000342183 USH2AO75445 5202 aa7.01□□□□□ -1.29
NRXN1-202ENST00000342183 KRTAP9-8Q9BYQ0 159 aa7.01□□□□□ -1.29
NRXN1-202ENST00000342183 KRTAP4-8A0A0G2JLE6 195 aa6.94□□□□□ -1.3
NRXN1-202ENST00000342183 KRTAP4-8Q9BYQ9 185 aa6.94□□□□□ -1.3
NRXN1-202ENST00000342183 KRTAP12-4P60329 112 aa6.79□□□□□ -1.32
NRXN1-202ENST00000342183 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
NRXN1-202ENST00000342183 KRTAP9-3Q9BYQ3 159 aa6.61□□□□□ -1.35
NRXN1-202ENST00000342183 LCE2AQ5TA79 106 aaPredicted RBP6.57□□□□□ -1.36
NRXN1-202ENST00000342183 CRCT1Q9UGL9 99 aa6.57□□□□□ -1.36
NRXN1-202ENST00000342183 KRTAP19-7Q3SYF9 63 aa6.56□□□□□ -1.36
NRXN1-202ENST00000342183 FSIP2Q5CZC0 6907 aa6.56□□□□□ -1.36
NRXN1-202ENST00000342183 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
NRXN1-202ENST00000342183 FCGBPQ9Y6R7 5405 aaPredicted RBP6.42□□□□□ -1.38
NRXN1-202ENST00000342183 MT1LQ93083 61 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms