RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 ZNF469Q96JG9 3925 aaPredicted RBP7.49□□□□□ -1.21
SYDE2-202ENST00000341460 KRTAP10-5P60370 271 aa7.41□□□□□ -1.22
SYDE2-202ENST00000341460 AKAP9Q99996 3911 aa7.38□□□□□ -1.23
SYDE2-202ENST00000341460 DNAH9Q9NYC9 4486 aa7.37□□□□□ -1.23
SYDE2-202ENST00000341460 ALMS1Q8TCU4 4167 aa7.33□□□□□ -1.24
SYDE2-202ENST00000341460 DNAH5Q8TE73 4624 aa7.28□□□□□ -1.24
SYDE2-202ENST00000341460 DNAH1Q9P2D7 4330 aa7.25□□□□□ -1.25
SYDE2-202ENST00000341460 LORP23490 312 aaPredicted RBP7.25□□□□□ -1.25
SYDE2-202ENST00000341460 PLECQ15149 4684 aaKnown RBP7.23□□□□□ -1.25
SYDE2-202ENST00000341460 DNAH11Q96DT5 4516 aa7.17□□□□□ -1.26
SYDE2-202ENST00000341460 DNAH10Q8IVF4 4471 aa7.15□□□□□ -1.26
SYDE2-202ENST00000341460 KRTAP8-1Q8IUC2 63 aa7.09□□□□□ -1.27
SYDE2-202ENST00000341460 DNAH17Q9UFH2 4485 aa7.03□□□□□ -1.28
SYDE2-202ENST00000341460 VPS13DQ5THJ4 4388 aa7.01□□□□□ -1.29
SYDE2-202ENST00000341460 DNHD1Q96M86 4753 aa6.97□□□□□ -1.29
SYDE2-202ENST00000341460 DNAH2Q9P225 4427 aa6.96□□□□□ -1.3
SYDE2-202ENST00000341460 KRTAP4-1Q9BYQ7 146 aa6.92□□□□□ -1.3
SYDE2-202ENST00000341460 STARD9Q9P2P6 4700 aa6.91□□□□□ -1.3
SYDE2-202ENST00000341460 DYNC1H1Q14204 4646 aaKnown RBP6.91□□□□□ -1.3
SYDE2-202ENST00000341460 FAT1Q14517 4588 aa6.91□□□□□ -1.3
SYDE2-202ENST00000341460 LRP1BQ9NZR2 4599 aa6.88□□□□□ -1.31
SYDE2-202ENST00000341460 MT1HP80294 61 aa6.88□□□□□ -1.31
SYDE2-202ENST00000341460 DNAH8Q96JB1 4490 aa6.86□□□□□ -1.31
SYDE2-202ENST00000341460 DNAH3Q8TD57 4116 aa6.8□□□□□ -1.32
SYDE2-202ENST00000341460 MT2AP02795 61 aa6.79□□□□□ -1.32
SYDE2-202ENST00000341460 SPRR2GQ9BYE4 73 aa6.77□□□□□ -1.33
SYDE2-202ENST00000341460 SACSQ9NZJ4 4579 aa6.76□□□□□ -1.33
SYDE2-202ENST00000341460 ANK2Q01484 3957 aa6.75□□□□□ -1.33
SYDE2-202ENST00000341460 RYR1P21817 5038 aa6.72□□□□□ -1.33
SYDE2-202ENST00000341460 DYNC2H1Q8NCM8 4307 aaKnown RBP6.71□□□□□ -1.34
SYDE2-202ENST00000341460 LCE3CQ5T5A8 94 aa6.7□□□□□ -1.34
SYDE2-202ENST00000341460 FAT2Q9NYQ8 4349 aa6.69□□□□□ -1.34
SYDE2-202ENST00000341460 KMT2AQ03164 3969 aa6.69□□□□□ -1.34
SYDE2-202ENST00000341460 PRKDCP78527 4128 aaKnown RBP6.67□□□□□ -1.34
SYDE2-202ENST00000341460 MT1FP04733 61 aa6.62□□□□□ -1.35
SYDE2-202ENST00000341460 APOBP04114 4563 aaKnown RBP6.62□□□□□ -1.35
SYDE2-202ENST00000341460 VPS13BQ7Z7G8 4022 aa6.6□□□□□ -1.35
SYDE2-202ENST00000341460 LYSTQ99698 3801 aa6.58□□□□□ -1.36
SYDE2-202ENST00000341460 KRTAP19-5Q3LI72 72 aa6.58□□□□□ -1.36
SYDE2-202ENST00000341460 KRTAP10-7P60409 375 aaPredicted RBP6.57□□□□□ -1.36
SYDE2-202ENST00000341460 SPRR2FQ96RM1 72 aa6.56□□□□□ -1.36
SYDE2-202ENST00000341460 MYCBP2O75592 4640 aa6.52□□□□□ -1.37
SYDE2-202ENST00000341460 FRAS1Q86XX4 4008 aa6.52□□□□□ -1.37
SYDE2-202ENST00000341460 KRTAP19-4Q3LI73 84 aa6.51□□□□□ -1.37
SYDE2-202ENST00000341460 SPRR5A0A1B0GTR4 108 aa6.47□□□□□ -1.37
SYDE2-202ENST00000341460 KRTAP12-4P60329 112 aa6.45□□□□□ -1.38
SYDE2-202ENST00000341460 CMYA5Q8N3K9 4069 aa6.39□□□□□ -1.39
SYDE2-202ENST00000341460 KRTAP17-1Q9BYP8 105 aa6.39□□□□□ -1.39
SYDE2-202ENST00000341460 RYR3Q15413 4870 aa6.37□□□□□ -1.39
SYDE2-202ENST00000341460 DNAH6Q9C0G6 4158 aa6.37□□□□□ -1.39
SYDE2-202ENST00000341460 KIAA1109Q2LD37 5005 aa6.36□□□□□ -1.39
SYDE2-202ENST00000341460 LRP1Q07954 4544 aaKnown RBP6.34□□□□□ -1.39
SYDE2-202ENST00000341460 HECTD4Q9Y4D8 3996 aa6.33□□□□□ -1.4
SYDE2-202ENST00000341460 DNAH7Q8WXX0 4024 aa6.27□□□□□ -1.41
SYDE2-202ENST00000341460 FAT3Q8TDW7 4589 aa6.27□□□□□ -1.41
SYDE2-202ENST00000341460 KRTAP19-8Q3LI54 63 aa6.26□□□□□ -1.41
SYDE2-202ENST00000341460 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
SYDE2-202ENST00000341460 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
SYDE2-202ENST00000341460 SPRR2EP22531 72 aa6.16□□□□□ -1.42
SYDE2-202ENST00000341460 SPRR2BP35325 72 aa6.16□□□□□ -1.42
SYDE2-202ENST00000341460 SPRR2AP35326 72 aa6.16□□□□□ -1.42
SYDE2-202ENST00000341460 RYR2Q92736 4967 aa6.16□□□□□ -1.42
SYDE2-202ENST00000341460 HYDINQ4G0P3 5121 aa6.11□□□□□ -1.43
SYDE2-202ENST00000341460 MT1XP80297 61 aa6.09□□□□□ -1.43
SYDE2-202ENST00000341460 LRP2P98164 4655 aa6.04□□□□□ -1.44
SYDE2-202ENST00000341460 MT1GP13640 62 aa6.03□□□□□ -1.44
SYDE2-202ENST00000341460 LCE3DQ9BYE3 92 aa6.03□□□□□ -1.44
SYDE2-202ENST00000341460 MT1BP07438 61 aa6.01□□□□□ -1.45
SYDE2-202ENST00000341460 LCE3EQ5T5B0 92 aa6□□□□□ -1.45
SYDE2-202ENST00000341460 HSPG2P98160 4391 aa5.98□□□□□ -1.45
SYDE2-202ENST00000341460 KRTAP9-8Q9BYQ0 159 aa5.97□□□□□ -1.45
SYDE2-202ENST00000341460 PKHD1P08F94 4074 aa5.97□□□□□ -1.45
SYDE2-202ENST00000341460 SPRR2DP22532 72 aa5.97□□□□□ -1.45
SYDE2-202ENST00000341460 HERC1Q15751 4861 aa5.96□□□□□ -1.46
SYDE2-202ENST00000341460 HERC2O95714 4834 aa5.96□□□□□ -1.46
SYDE2-202ENST00000341460 LCE2BO14633 110 aa5.94□□□□□ -1.46
SYDE2-202ENST00000341460 LPAP08519 4548 aa5.9□□□□□ -1.46
SYDE2-202ENST00000341460 LCE2CQ5TA81 110 aa5.88□□□□□ -1.47
SYDE2-202ENST00000341460 KRTAP9-3Q9BYQ3 159 aa5.86□□□□□ -1.47
SYDE2-202ENST00000341460 PKD1P98161 4303 aa5.85□□□□□ -1.47
SYDE2-202ENST00000341460 KRTAP4-8A0A0G2JLE6 195 aa5.85□□□□□ -1.47
SYDE2-202ENST00000341460 KRTAP4-8Q9BYQ9 185 aa5.85□□□□□ -1.47
SYDE2-202ENST00000341460 KMT2CQ8NEZ4 4911 aaKnown RBP5.8□□□□□ -1.48
SYDE2-202ENST00000341460 BIRC6Q9NR09 4857 aa5.79□□□□□ -1.48
SYDE2-202ENST00000341460 PCLOQ9Y6V0 5065 aa5.74□□□□□ -1.49
SYDE2-202ENST00000341460 PRM1P04553 51 aa5.71□□□□□ -1.49
SYDE2-202ENST00000341460 TNXBP22105 4242 aa5.69□□□□□ -1.5
SYDE2-202ENST00000341460 PKHD1L1Q86WI1 4243 aa5.67□□□□□ -1.5
SYDE2-202ENST00000341460 KRTAP19-3Q7Z4W3 81 aa5.65□□□□□ -1.51
SYDE2-202ENST00000341460 KRTAP19-2Q3LHN2 52 aa5.64□□□□□ -1.51
SYDE2-202ENST00000341460 MT1LQ93083 61 aa5.56□□□□□ -1.52
SYDE2-202ENST00000341460 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
SYDE2-202ENST00000341460 MUC17Q685J3 4493 aa5.55□□□□□ -1.52
SYDE2-202ENST00000341460 MT1EP04732 61 aa5.51□□□□□ -1.53
SYDE2-202ENST00000341460 FLGP20930 4061 aaPredicted RBP5.5□□□□□ -1.53
SYDE2-202ENST00000341460 LCE2DQ5TA82 110 aaPredicted RBP5.46□□□□□ -1.53
SYDE2-202ENST00000341460 MT3P25713 68 aa5.43□□□□□ -1.54
SYDE2-202ENST00000341460 ABCA13Q86UQ4 5058 aa5.43□□□□□ -1.54
SYDE2-202ENST00000341460 EPPK1P58107 5090 aaKnown RBP5.39□□□□□ -1.55
SYDE2-202ENST00000341460 MT1MQ8N339 61 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms