RNA–Protein interactions for RNA: ENST00000338382.10

FOCAD-201, Transcript of focadhesin, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FOCAD, Length 5,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-201ENST00000338382 HUWE1Q7Z6Z7 4374 aaKnown RBP3.01□□□□□ -1.93
FOCAD-201ENST00000338382 A0A1B0GVY2 172 aa3□□□□□ -1.93
FOCAD-201ENST00000338382 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
FOCAD-201ENST00000338382 KRTAP10-10P60014 251 aa2.95□□□□□ -1.94
FOCAD-201ENST00000338382 VPS13DQ5THJ4 4388 aa2.95□□□□□ -1.94
FOCAD-201ENST00000338382 DNAH8Q96JB1 4490 aa2.95□□□□□ -1.94
FOCAD-201ENST00000338382 LORP23490 312 aaPredicted RBP2.95□□□□□ -1.94
FOCAD-201ENST00000338382 PLECQ15149 4684 aaKnown RBP2.94□□□□□ -1.94
FOCAD-201ENST00000338382 KMT2AQ03164 3969 aa2.93□□□□□ -1.94
FOCAD-201ENST00000338382 HECTD4Q9Y4D8 3996 aa2.93□□□□□ -1.94
FOCAD-201ENST00000338382 KRTAP12-3P60328 96 aa2.93□□□□□ -1.94
FOCAD-201ENST00000338382 DNAH2Q9P225 4427 aa2.91□□□□□ -1.94
FOCAD-201ENST00000338382 DNAH17Q9UFH2 4485 aa2.9□□□□□ -1.94
FOCAD-201ENST00000338382 DNAH6Q9C0G6 4158 aa2.9□□□□□ -1.95
FOCAD-201ENST00000338382 STARD9Q9P2P6 4700 aa2.88□□□□□ -1.95
FOCAD-201ENST00000338382 DNAH11Q96DT5 4516 aa2.87□□□□□ -1.95
FOCAD-201ENST00000338382 KRTAP10-12P60413 245 aa2.87□□□□□ -1.95
FOCAD-201ENST00000338382 DYNC2H1Q8NCM8 4307 aaKnown RBP2.86□□□□□ -1.95
FOCAD-201ENST00000338382 FBN3Q75N90 2809 aa2.85□□□□□ -1.95
FOCAD-201ENST00000338382 MEGF8Q7Z7M0 2845 aa2.85□□□□□ -1.95
FOCAD-201ENST00000338382 PRKDCP78527 4128 aaKnown RBP2.83□□□□□ -1.96
FOCAD-201ENST00000338382 FAT2Q9NYQ8 4349 aa2.83□□□□□ -1.96
FOCAD-201ENST00000338382 DNAH5Q8TE73 4624 aa2.8□□□□□ -1.96
FOCAD-201ENST00000338382 KRTAP21-3Q3LHN1 58 aa2.77□□□□□ -1.97
FOCAD-201ENST00000338382 HYDINQ4G0P3 5121 aa2.77□□□□□ -1.97
FOCAD-201ENST00000338382 VPS13BQ7Z7G8 4022 aa2.75□□□□□ -1.97
FOCAD-201ENST00000338382 LRP1BQ9NZR2 4599 aa2.74□□□□□ -1.97
FOCAD-201ENST00000338382 KRTAP8-1Q8IUC2 63 aa2.74□□□□□ -1.97
FOCAD-201ENST00000338382 CRCT1Q9UGL9 99 aa2.74□□□□□ -1.97
FOCAD-201ENST00000338382 KRTAP10-4P60372 401 aaPredicted RBP2.72□□□□□ -1.97
FOCAD-201ENST00000338382 PKD1P98161 4303 aa2.72□□□□□ -1.97
FOCAD-201ENST00000338382 PKHD1P08F94 4074 aa2.71□□□□□ -1.98
FOCAD-201ENST00000338382 DNHD1Q96M86 4753 aa2.7□□□□□ -1.98
FOCAD-201ENST00000338382 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
FOCAD-201ENST00000338382 KRTAP10-5P60370 271 aa2.68□□□□□ -1.98
FOCAD-201ENST00000338382 APOBP04114 4563 aaKnown RBP2.64□□□□□ -1.99
FOCAD-201ENST00000338382 SACSQ9NZJ4 4579 aa2.63□□□□□ -1.99
FOCAD-201ENST00000338382 FAT1Q14517 4588 aa2.61□□□□□ -1.99
FOCAD-201ENST00000338382 MT1HL1P0DM35 61 aa2.6□□□□□ -1.99
FOCAD-201ENST00000338382 KRTAP12-4P60329 112 aa2.59□□□□□ -2
FOCAD-201ENST00000338382 PKHD1L1Q86WI1 4243 aa2.58□□□□□ -2
FOCAD-201ENST00000338382 HSPG2P98160 4391 aa2.58□□□□□ -2
FOCAD-201ENST00000338382 SPRR2GQ9BYE4 73 aa2.57□□□□□ -2
FOCAD-201ENST00000338382 LPAP08519 4548 aa2.57□□□□□ -2
FOCAD-201ENST00000338382 MYCBP2O75592 4640 aa2.56□□□□□ -2
FOCAD-201ENST00000338382 DYNC1H1Q14204 4646 aaKnown RBP2.55□□□□□ -2
FOCAD-201ENST00000338382 LRP1Q07954 4544 aaKnown RBP2.53□□□□□ -2
FOCAD-201ENST00000338382 KRTAP19-5Q3LI72 72 aa2.53□□□□□ -2
FOCAD-201ENST00000338382 KRTAP19-4Q3LI73 84 aa2.53□□□□□ -2
FOCAD-201ENST00000338382 TNXBP22105 4242 aa2.5□□□□□ -2.01
FOCAD-201ENST00000338382 FAT3Q8TDW7 4589 aa2.48□□□□□ -2.01
FOCAD-201ENST00000338382 KMT2CQ8NEZ4 4911 aaKnown RBP2.47□□□□□ -2.01
FOCAD-201ENST00000338382 KRTAP4-1Q9BYQ7 146 aa2.45□□□□□ -2.02
FOCAD-201ENST00000338382 KRTAP10-7P60409 375 aaPredicted RBP2.44□□□□□ -2.02
FOCAD-201ENST00000338382 KRTAP2-3P0C7H8 128 aa2.43□□□□□ -2.02
FOCAD-201ENST00000338382 KRTAP2-4Q9BYR9 128 aa2.43□□□□□ -2.02
FOCAD-201ENST00000338382 KRTAP2-1Q9BYU5 128 aa2.43□□□□□ -2.02
FOCAD-201ENST00000338382 RYR1P21817 5038 aa2.42□□□□□ -2.02
FOCAD-201ENST00000338382 RYR2Q92736 4967 aa2.4□□□□□ -2.03
FOCAD-201ENST00000338382 LRP2P98164 4655 aa2.39□□□□□ -2.03
FOCAD-201ENST00000338382 RYR3Q15413 4870 aa2.38□□□□□ -2.03
FOCAD-201ENST00000338382 ABCA13Q86UQ4 5058 aa2.38□□□□□ -2.03
FOCAD-201ENST00000338382 KRTAP19-1Q8IUB9 90 aa2.36□□□□□ -2.03
FOCAD-201ENST00000338382 PRM1P04553 51 aa2.36□□□□□ -2.03
FOCAD-201ENST00000338382 MT1XP80297 61 aa2.35□□□□□ -2.03
FOCAD-201ENST00000338382 LCE2DQ5TA82 110 aaPredicted RBP2.34□□□□□ -2.03
FOCAD-201ENST00000338382 KRTAP19-8Q3LI54 63 aa2.34□□□□□ -2.04
FOCAD-201ENST00000338382 KRTAP4-5Q9BYR2 181 aa2.34□□□□□ -2.04
FOCAD-201ENST00000338382 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
FOCAD-201ENST00000338382 MUC2Q02817 5179 aa2.31□□□□□ -2.04
FOCAD-201ENST00000338382 KRTAP17-1Q9BYP8 105 aa2.31□□□□□ -2.04
FOCAD-201ENST00000338382 MT2AP02795 61 aa2.31□□□□□ -2.04
FOCAD-201ENST00000338382 KIAA1109Q2LD37 5005 aa2.3□□□□□ -2.04
FOCAD-201ENST00000338382 FLGP20930 4061 aaPredicted RBP2.3□□□□□ -2.04
FOCAD-201ENST00000338382 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
FOCAD-201ENST00000338382 EPPK1P58107 5090 aaKnown RBP2.29□□□□□ -2.04
FOCAD-201ENST00000338382 MT1FP04733 61 aa2.28□□□□□ -2.04
FOCAD-201ENST00000338382 LCE3BQ5TA77 95 aa2.28□□□□□ -2.05
FOCAD-201ENST00000338382 MUC17Q685J3 4493 aa2.26□□□□□ -2.05
FOCAD-201ENST00000338382 HERC1Q15751 4861 aa2.24□□□□□ -2.05
FOCAD-201ENST00000338382 MT3P25713 68 aa2.23□□□□□ -2.05
FOCAD-201ENST00000338382 MT1HP80294 61 aa2.23□□□□□ -2.05
FOCAD-201ENST00000338382 SPRR2FQ96RM1 72 aa2.23□□□□□ -2.05
FOCAD-201ENST00000338382 MT1BP07438 61 aa2.22□□□□□ -2.05
FOCAD-201ENST00000338382 PCLOQ9Y6V0 5065 aa2.21□□□□□ -2.06
FOCAD-201ENST00000338382 MT1GP13640 62 aa2.21□□□□□ -2.06
FOCAD-201ENST00000338382 KRTAP4-7Q9BYR0 210 aa2.19□□□□□ -2.06
FOCAD-201ENST00000338382 LCE1AQ5T7P2 110 aa2.18□□□□□ -2.06
FOCAD-201ENST00000338382 KRTAP9-6A8MVA2 160 aa2.17□□□□□ -2.06
FOCAD-201ENST00000338382 KRTAP9-6A0A140TA67 174 aa2.16□□□□□ -2.06
FOCAD-201ENST00000338382 FAT4Q6V0I7 4981 aa2.16□□□□□ -2.06
FOCAD-201ENST00000338382 SPRR2EP22531 72 aa2.16□□□□□ -2.06
FOCAD-201ENST00000338382 SPRR2BP35325 72 aa2.16□□□□□ -2.06
FOCAD-201ENST00000338382 SPRR2AP35326 72 aa2.16□□□□□ -2.06
FOCAD-201ENST00000338382 MT1LQ93083 61 aa2.16□□□□□ -2.06
FOCAD-201ENST00000338382 KRTAP19-2Q3LHN2 52 aa2.16□□□□□ -2.06
FOCAD-201ENST00000338382 MT1EP04732 61 aa2.15□□□□□ -2.07
FOCAD-201ENST00000338382 LCE2BO14633 110 aa2.15□□□□□ -2.07
FOCAD-201ENST00000338382 LCE2CQ5TA81 110 aa2.14□□□□□ -2.07
FOCAD-201ENST00000338382 KRTAP2-2Q9BYT5 123 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms