RNA–Protein interactions for RNA: ENST00000336086.10

URGCP-201, Transcript of upregulator of cell proliferation, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene URGCP, Length 5,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URGCP-201ENST00000336086 AKAP9Q99996 3911 aa5.49□□□□□ -1.53
URGCP-201ENST00000336086 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
URGCP-201ENST00000336086 DNAH9Q9NYC9 4486 aa5.4□□□□□ -1.54
URGCP-201ENST00000336086 CSMD3Q7Z407 3707 aa5.37□□□□□ -1.55
URGCP-201ENST00000336086 ZNF469Q96JG9 3925 aaPredicted RBP5.27□□□□□ -1.57
URGCP-201ENST00000336086 DNAH1Q9P2D7 4330 aa5.23□□□□□ -1.57
URGCP-201ENST00000336086 DNAH10Q8IVF4 4471 aa5.22□□□□□ -1.57
URGCP-201ENST00000336086 KRTAP10-5P60370 271 aa5.2□□□□□ -1.58
URGCP-201ENST00000336086 DNAH11Q96DT5 4516 aa5.18□□□□□ -1.58
URGCP-201ENST00000336086 DNAH5Q8TE73 4624 aa5.18□□□□□ -1.58
URGCP-201ENST00000336086 DNAH2Q9P225 4427 aa5.13□□□□□ -1.59
URGCP-201ENST00000336086 PLECQ15149 4684 aaKnown RBP5.13□□□□□ -1.59
URGCP-201ENST00000336086 KRTAP4-1Q9BYQ7 146 aa5.1□□□□□ -1.59
URGCP-201ENST00000336086 DNAH17Q9UFH2 4485 aa5.1□□□□□ -1.59
URGCP-201ENST00000336086 DNHD1Q96M86 4753 aa5.09□□□□□ -1.59
URGCP-201ENST00000336086 DNAH3Q8TD57 4116 aa5.08□□□□□ -1.6
URGCP-201ENST00000336086 DNAH8Q96JB1 4490 aa5.07□□□□□ -1.6
URGCP-201ENST00000336086 VPS13DQ5THJ4 4388 aa5.07□□□□□ -1.6
URGCP-201ENST00000336086 SPRR2GQ9BYE4 73 aa5.02□□□□□ -1.61
URGCP-201ENST00000336086 ANK2Q01484 3957 aa5.02□□□□□ -1.61
URGCP-201ENST00000336086 KRTAP8-1Q8IUC2 63 aa5.01□□□□□ -1.61
URGCP-201ENST00000336086 CMYA5Q8N3K9 4069 aa4.97□□□□□ -1.61
URGCP-201ENST00000336086 STARD9Q9P2P6 4700 aa4.96□□□□□ -1.61
URGCP-201ENST00000336086 FAT2Q9NYQ8 4349 aa4.96□□□□□ -1.61
URGCP-201ENST00000336086 FAT1Q14517 4588 aa4.95□□□□□ -1.62
URGCP-201ENST00000336086 DYNC1H1Q14204 4646 aaKnown RBP4.94□□□□□ -1.62
URGCP-201ENST00000336086 MT1HP80294 61 aa4.94□□□□□ -1.62
URGCP-201ENST00000336086 MT2AP02795 61 aa4.93□□□□□ -1.62
URGCP-201ENST00000336086 DYNC2H1Q8NCM8 4307 aaKnown RBP4.92□□□□□ -1.62
URGCP-201ENST00000336086 LCE3CQ5T5A8 94 aa4.92□□□□□ -1.62
URGCP-201ENST00000336086 SACSQ9NZJ4 4579 aa4.92□□□□□ -1.62
URGCP-201ENST00000336086 LRP1BQ9NZR2 4599 aa4.91□□□□□ -1.62
URGCP-201ENST00000336086 KRTAP19-5Q3LI72 72 aa4.9□□□□□ -1.62
URGCP-201ENST00000336086 DNAH6Q9C0G6 4158 aa4.89□□□□□ -1.63
URGCP-201ENST00000336086 PRKDCP78527 4128 aaKnown RBP4.86□□□□□ -1.63
URGCP-201ENST00000336086 MT1FP04733 61 aa4.84□□□□□ -1.63
URGCP-201ENST00000336086 KMT2AQ03164 3969 aa4.81□□□□□ -1.64
URGCP-201ENST00000336086 DNAH7Q8WXX0 4024 aa4.79□□□□□ -1.64
URGCP-201ENST00000336086 APOBP04114 4563 aaKnown RBP4.75□□□□□ -1.65
URGCP-201ENST00000336086 VPS13BQ7Z7G8 4022 aa4.75□□□□□ -1.65
URGCP-201ENST00000336086 RYR1P21817 5038 aa4.73□□□□□ -1.65
URGCP-201ENST00000336086 FRAS1Q86XX4 4008 aa4.73□□□□□ -1.65
URGCP-201ENST00000336086 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
URGCP-201ENST00000336086 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
URGCP-201ENST00000336086 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
URGCP-201ENST00000336086 KRTAP17-1Q9BYP8 105 aa4.67□□□□□ -1.66
URGCP-201ENST00000336086 KRTAP19-1Q8IUB9 90 aa4.65□□□□□ -1.66
URGCP-201ENST00000336086 RYR3Q15413 4870 aa4.62□□□□□ -1.67
URGCP-201ENST00000336086 KRTAP19-8Q3LI54 63 aa4.62□□□□□ -1.67
URGCP-201ENST00000336086 KIAA1109Q2LD37 5005 aa4.62□□□□□ -1.67
URGCP-201ENST00000336086 SPRR2FQ96RM1 72 aa4.59□□□□□ -1.67
URGCP-201ENST00000336086 MT1XP80297 61 aa4.57□□□□□ -1.68
URGCP-201ENST00000336086 HECTD4Q9Y4D8 3996 aa4.57□□□□□ -1.68
URGCP-201ENST00000336086 LYSTQ99698 3801 aa4.56□□□□□ -1.68
URGCP-201ENST00000336086 RYR2Q92736 4967 aa4.56□□□□□ -1.68
URGCP-201ENST00000336086 MYCBP2O75592 4640 aa4.56□□□□□ -1.68
URGCP-201ENST00000336086 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
URGCP-201ENST00000336086 FAT3Q8TDW7 4589 aa4.52□□□□□ -1.69
URGCP-201ENST00000336086 BIRC6Q9NR09 4857 aa4.51□□□□□ -1.69
URGCP-201ENST00000336086 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
URGCP-201ENST00000336086 HSPG2P98160 4391 aa4.47□□□□□ -1.69
URGCP-201ENST00000336086 MT1BP07438 61 aa4.46□□□□□ -1.7
URGCP-201ENST00000336086 LRP1Q07954 4544 aaKnown RBP4.45□□□□□ -1.7
URGCP-201ENST00000336086 MT1GP13640 62 aa4.43□□□□□ -1.7
URGCP-201ENST00000336086 HYDINQ4G0P3 5121 aa4.42□□□□□ -1.7
URGCP-201ENST00000336086 HERC2O95714 4834 aa4.4□□□□□ -1.71
URGCP-201ENST00000336086 PKHD1L1Q86WI1 4243 aa4.4□□□□□ -1.71
URGCP-201ENST00000336086 SPRR2EP22531 72 aa4.37□□□□□ -1.71
URGCP-201ENST00000336086 SPRR2BP35325 72 aa4.37□□□□□ -1.71
URGCP-201ENST00000336086 SPRR2AP35326 72 aa4.37□□□□□ -1.71
URGCP-201ENST00000336086 HERC1Q15751 4861 aa4.37□□□□□ -1.71
URGCP-201ENST00000336086 KRTAP9-8Q9BYQ0 159 aa4.35□□□□□ -1.71
URGCP-201ENST00000336086 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
URGCP-201ENST00000336086 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
URGCP-201ENST00000336086 LCE3DQ9BYE3 92 aa4.3□□□□□ -1.72
URGCP-201ENST00000336086 PKD1P98161 4303 aa4.28□□□□□ -1.72
URGCP-201ENST00000336086 LCE2CQ5TA81 110 aa4.25□□□□□ -1.73
URGCP-201ENST00000336086 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
URGCP-201ENST00000336086 KRTAP9-3Q9BYQ3 159 aa4.25□□□□□ -1.73
URGCP-201ENST00000336086 LPAP08519 4548 aa4.24□□□□□ -1.73
URGCP-201ENST00000336086 PKHD1P08F94 4074 aa4.24□□□□□ -1.73
URGCP-201ENST00000336086 TNXBP22105 4242 aa4.23□□□□□ -1.73
URGCP-201ENST00000336086 SPRR2DP22532 72 aa4.23□□□□□ -1.73
URGCP-201ENST00000336086 LRP2P98164 4655 aa4.23□□□□□ -1.73
URGCP-201ENST00000336086 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
URGCP-201ENST00000336086 PCLOQ9Y6V0 5065 aa4.17□□□□□ -1.74
URGCP-201ENST00000336086 KMT2CQ8NEZ4 4911 aaKnown RBP4.17□□□□□ -1.74
URGCP-201ENST00000336086 MUC17Q685J3 4493 aa4.16□□□□□ -1.74
URGCP-201ENST00000336086 MT1LQ93083 61 aa4.16□□□□□ -1.74
URGCP-201ENST00000336086 LCE2BO14633 110 aa4.15□□□□□ -1.75
URGCP-201ENST00000336086 KRTAP19-2Q3LHN2 52 aa4.1□□□□□ -1.75
URGCP-201ENST00000336086 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.75
URGCP-201ENST00000336086 MT1EP04732 61 aa4.09□□□□□ -1.76
URGCP-201ENST00000336086 EPPK1P58107 5090 aaKnown RBP4.05□□□□□ -1.76
URGCP-201ENST00000336086 PRM1P04553 51 aa4.03□□□□□ -1.76
URGCP-201ENST00000336086 ABCA13Q86UQ4 5058 aa4.01□□□□□ -1.77
URGCP-201ENST00000336086 FLGP20930 4061 aaPredicted RBP4□□□□□ -1.77
URGCP-201ENST00000336086 KRTAP9-2Q9BYQ4 174 aa3.98□□□□□ -1.77
URGCP-201ENST00000336086 LOC100996750A0A140TA64 210 aa3.96□□□□□ -1.78
URGCP-201ENST00000336086 MT1MQ8N339 61 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms